Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv12498 Davidia involucrata HOM05D001739 ORTHO05D006605 1.2e-187 659.8 377 100.0
Actinidia09324 Actinidia chinensis HOM05D001739 ORTHO05D006605 1.6e-110 403.7 337 67.7
Rhsim03G0025300 Rhododendron simsii HOM05D001739 ORTHO05D006605 2.3e-109 399.8 323 68.4
vmacro07843 Vaccinium macrocarpon HOM05D001739 ORTHO05D006605 1.6e-107 393.7 324 68.2
Lju124C42G12 Lonicera japonica HOM05D001739 ORTHO05D006605 3.1e-106 389.4 323 69.0
Hma1.2p1_1041F.1_g250970 Hydrangea macrophylla HOM05D001739 ORTHO05D006605 2.9e-104 382.9 327 66.4
CiPaw.09G038800 Carya illinoinensis HOM05D001739 ORTHO05D006605 6.2e-99 365.2 327 61.2
TAR623G1060 Trochodendron aralioides HOM05D001739 ORTHO05D006605 1.1e-98 364.4 330 60.9
CSS0037723 Camellia sinensis var. sinensis HOM05D001739 ORTHO05D006605 4.0e-98 362.5 383 60.1
GSVIVG01033265001 Vitis vinifera HOM05D001739 ORTHO05D006605 3.4e-97 359.4 325 63.1
QL07p000798 Quercus lobata HOM05D001739 ORTHO05D006605 8.4e-96 354.8 329 61.4
Cfa016809 Carpinus fangiana HOM05D001739 ORTHO05D006605 3.2e-95 352.8 324 62.7
Haze_19848 Corylus avellana HOM05D001739 ORTHO05D006605 7.1e-95 351.7 324 62.0
Nn7g36309 Nelumbo nucifera HOM05D001739 ORTHO05D006605 7.1e-95 351.7 323 58.8
RcHm_v2.0_Chr3g0482611 Rosa chinensis HOM05D001739 ORTHO05D006605 3.7e-91 339.3 326 57.7
FAN05G1753 Fragaria x ananassa HOM05D001739 ORTHO05D006605 4.8e-91 339.0 325 58.2
TWI74G0913 Tripterygium wilfordii HOM05D001739 ORTHO05D006605 6.3e-91 338.6 325 59.4
FAN02G3624 Fragaria x ananassa HOM05D001739 ORTHO05D006605 1.1e-90 337.8 325 57.8
Atru.chr1.1111 Acer truncatum HOM05D001739 ORTHO05D006605 1.5e-89 334.0 333 58.3
FvH4_6g24030 Fragaria vesca HOM05D001739 ORTHO05D006605 2.0e-89 333.6 314 59.2
FAN14G2551 Fragaria x ananassa HOM05D001739 ORTHO05D006605 2.0e-89 333.6 314 59.2
Thecc.05G152600 Theobroma cacao HOM05D001739 ORTHO05D006605 3.4e-89 332.8 325 60.3
Potri.006G050000 Populus trichocarpa HOM05D001739 ORTHO05D006605 1.3e-88 330.9 322 60.2
CANSAT80G2527 Cannabis sativa HOM05D001739 ORTHO05D006605 5.0e-88 328.9 331 57.1
Ciclev10006456m.g Citrus clementina HOM05D001739 ORTHO05D006605 8.5e-88 328.2 327 59.9
MD12G1075000 Malus domestica HOM05D001739 ORTHO05D006605 1.2e-86 324.3 330 57.0
Oeu033011.1 Olea europaea HOM05D001739 ORTHO05D006605 1.2e-86 324.3 324 57.4
Prupe.7G058600 Prunus persica HOM05D001739 ORTHO05D006605 3.6e-86 322.8 321 57.9
Duzib093G0255 Durio zibethinus HOM05D001739 ORTHO05D006605 6.7e-85 318.5 321 59.2
Lsat_1_v5_gn_9_30560 Lactuca sativa HOM05D001739 ORTHO05D006605 6.3e-83 312.0 338 53.6
Manes.09G020800 Manihot esculenta HOM05D001739 ORTHO05D006605 2.4e-82 310.1 317 56.8
Gorai.007G360700 Gossypium raimondii HOM05D001739 ORTHO05D006605 2.2e-80 303.5 325 55.4
Cc06_g17610 Coffea canephora HOM05D001739 ORTHO05D006605 2.9e-80 303.1 316 57.3
CAN.G676.32 Capsicum annuum HOM05D001739 ORTHO05D006605 3.8e-80 302.8 324 55.6
Gohir.A11G312800 Gossypium hirsutum HOM05D001739 ORTHO05D006605 5.0e-80 302.4 325 54.8
DCAR_009063 Daucus carota HOM05D001739 ORTHO05D006605 1.1e-79 301.2 317 55.5
Sopen04g007950 Solanum pennellii HOM05D001739 ORTHO05D006605 1.4e-79 300.8 324 54.3
Lj5g0016851 Lotus japonicus HOM05D001739 ORTHO05D006605 4.2e-79 299.3 312 55.1
Medtr1g053255 Medicago truncatula HOM05D001739 ORTHO05D006605 9.4e-79 298.1 311 55.0
Aqoxy2G00202 Aquilegia oxysepala HOM05D001739 ORTHO05D006605 2.7e-78 296.6 326 52.8
Solyc04g015940.3 Solanum lycopersicum HOM05D001739 ORTHO05D006605 3.6e-78 296.2 324 54.3
Nitab4.5_0000586g0090 Nicotiana tabacum HOM05D001739 ORTHO05D006605 6.1e-78 295.4 325 55.1
Ca_26352_v3 Cicer arietinum L. HOM05D001739 ORTHO05D006605 7.9e-78 295.0 312 54.8
Glyma.02G184900 Glycine max HOM05D001739 ORTHO05D006605 6.7e-77 292.0 312 53.2
TPR.G29097 Trifolium pratense HOM05D001739 ORTHO05D006605 6.7e-77 292.0 311 53.4
Phvul.007G252200 Phaseolus vulgaris HOM05D001739 ORTHO05D006605 8.8e-77 291.6 312 53.5
Lalb_Chr21g0316501 Lupinus albus HOM05D001739 ORTHO05D006605 1.1e-76 291.2 319 53.6
Psat6g118760 Pisum sativum HOM05D001739 ORTHO05D006605 1.7e-75 287.3 311 52.4
Migut.J01753 Erythranthe guttata HOM05D001739 ORTHO05D006605 1.4e-74 284.3 324 49.7
MSTRG.19857 Avicennia marina HOM05D001739 ORTHO05D006605 1.8e-74 283.9 319 52.7
MBI19_g41435_MAGBIO Magnolia biondii HOM05D001739 ORTHO05D006605 2.4e-74 283.5 315 52.7
SalBow6G2278 Salvia bowleyana HOM05D001739 ORTHO05D006605 2.0e-73 280.4 325 51.1
SGA_v2.0_scaffold105G30404 Striga asiatica HOM05D001739 ORTHO05D006605 3.4e-73 279.6 324 49.4
BcaNung01063 Brassica carinata HOM05D001739 ORTHO05D006605 4.5e-73 279.3 327 49.8
PGR142G2644 Punica granatum HOM05D001739 ORTHO05D006605 4.5e-73 279.3 325 49.8
HanXRQChr10g0296671 Helianthus annuus HOM05D001739 ORTHO05D006605 5.9e-73 278.9 314 51.0
Eucgr.K01988 Eucalyptus grandis HOM05D001739 ORTHO05D006605 7.7e-73 278.5 306 52.6
Thhalv10024271m.g Eutrema salsugineum HOM05D001739 ORTHO05D006605 7.7e-73 278.5 325 49.5
Nitab4.5_0009615g0010 Nicotiana tabacum HOM05D001739 ORTHO05D006605 7.7e-73 278.5 325 52.9
A01p14820 Brassica napus HOM05D001739 ORTHO05D006605 1.0e-72 278.1 327 49.8
BraA01t01423Z Brassica rapa HOM05D001739 ORTHO05D006605 2.2e-72 276.9 327 49.5
AL7G29870 Arabidopsis lyrata HOM05D001739 ORTHO05D006605 2.9e-72 276.6 327 48.9
Sabra06G0034900 Salix brachista HOM05D001739 ORTHO05D006605 3.8e-72 276.2 331 52.6
Sc13g0001700 Simmondsia chinensis HOM05D001739 ORTHO05D006605 5.0e-72 275.8 333 49.8
VMungo0720G0235 Vigna mungo HOM05D001739 ORTHO05D006605 5.0e-72 275.8 312 51.9
Aa31LG6G6730 Aethionema arabicum HOM05D001739 ORTHO05D006605 1.4e-71 274.2 327 48.9
Eucgr.K01801 Eucalyptus grandis HOM05D001739 ORTHO05D006605 3.2e-71 273.1 320 50.6
Sed0004072 Sechium edule HOM05D001739 ORTHO05D006605 3.2e-71 273.1 317 52.1
Carub.0007s1775 Capsella rubella HOM05D001739 ORTHO05D006605 4.2e-71 272.7 332 47.9
BcaC09g50980 Brassica carinata HOM05D001739 ORTHO05D006605 1.2e-70 271.2 328 50.0
C01p18510 Brassica napus HOM05D001739 ORTHO05D006605 1.2e-70 271.2 328 50.0
BolC1t01774H Brassica oleracea HOM05D001739 ORTHO05D006605 1.2e-70 271.2 328 50.0
AT4G23540 Arabidopsis thaliana HOM05D001739 ORTHO05D006605 2.1e-70 270.4 332 47.9
Eucgr.K01742 Eucalyptus grandis HOM05D001739 ORTHO05D006605 3.0e-69 266.5 304 52.0
Sp7g21460 Schrenkiella parvula HOM05D001739 ORTHO05D006605 3.0e-69 266.5 325 48.6
Peaxi162Scf00130g00214 Petunia axillaris HOM05D001739 ORTHO05D006605 1.1e-68 264.6 320 51.6
THA.LOC104804954 Tarenaya hassleriana HOM05D001739 ORTHO05D006605 2.0e-68 263.8 325 47.1
THA.LOC104806422 Tarenaya hassleriana HOM05D001739 ORTHO05D006605 2.0e-68 263.8 325 47.1
ECA247G0166 Erigeron canadensis HOM05D001739 ORTHO05D006605 1.3e-67 261.2 316 48.7
CARHR230910 Cardamine hirsuta HOM05D001739 ORTHO05D006605 3.7e-67 259.6 326 48.5
CsaV3_3G040670 Cucumis sativus L. HOM05D001739 ORTHO05D006605 3.1e-66 256.5 317 50.8
MELO3C009801.2 Cucumis melo HOM05D001739 ORTHO05D006605 4.1e-66 256.1 330 49.1
ClCG10G015770 Citrullus lanatus HOM05D001739 ORTHO05D006605 1.2e-65 254.6 325 49.8
arahy.Tifrunner.gnm1.ann1.LXN0TE Arachis hypogaea HOM05D001739 ORTHO05D006605 4.5e-65 252.7 383 41.3
Hund24703 Selenicereus undatus HOM05D001739 ORTHO05D006605 2.5e-63 246.9 325 48.6
CDE10G0506 Ceratophyllum demersum HOM05D001739 ORTHO05D006605 2.0e-60 237.3 321 43.9
arahy.Tifrunner.gnm1.ann1.R22IQ0 Arachis hypogaea HOM05D001739 ORTHO05D006605 5.7e-60 235.7 320 43.4
PSO675G4789 Papaver somniferum HOM05D001739 ORTHO05D006605 3.5e-57 226.5 329 42.6
Cpa.g.sc33.205 Carica papaya HOM05D001739 ORTHO05D006605 1.0e-56 224.9 209 59.3
unitig_578.g15982 Utricularia gibba HOM05D001739 ORTHO05D006605 1.8e-53 214.2 290 45.9
AUR62026046 Chenopodium quinoa HOM05D001739 ORTHO05D006605 8.8e-53 211.8 318 43.1
EL10Ac3g07096 Beta vulgaris HOM05D001739 ORTHO05D006605 3.4e-52 209.9 312 43.9
SHI37393 Sapria himalayana HOM05D001739 ORTHO05D006605 3.1e-50 203.4 296 43.2
Ah.13g076500 Amaranthus hybridus HOM05D001739 ORTHO05D006605 4.5e-49 199.5 312 42.3
HPP92_012087 Vanilla planifolia HOM05D001739 ORTHO05D006605 5.9e-49 199.1 328 37.8
ATR0730G042 Amborella trichopoda HOM05D001739 ORTHO05D006605 1.7e-43 181.0 325 40.6
AUR62024456 Chenopodium quinoa HOM05D001739 ORTHO05D006605 4.9e-43 179.5 277 40.4
SEGI_16086 Sequoiadendron giganteum HOM05D001739 ORTHO05D004575 6.4e-35 152.5 322 33.5
Gohir.D11G329500 Gossypium hirsutum HOM05D001739 ORTHO05D006605 7.0e-34 149.1 150 56.7
Lsat_1_v5_gn_9_19960 Lactuca sativa HOM05D001739 ORTHO05D006605 8.0e-30 135.6 314 35.0
Lsat_1_v5_gn_6_98861 Lactuca sativa HOM05D001739 ORTHO05D006605 8.9e-29 132.1 218 39.4
Os01g0957900 Oryza sativa ssp. japonica HOM05D001739 ORTHO05D006605 1.3e-27 128.3 302 31.1
Zm00001eb140500 Zea mays HOM05D001739 ORTHO05D006605 7.0e-26 122.5 291 29.2
SEGI_37036 Sequoiadendron giganteum HOM05D001739 ORTHO05D004575 9.5e-23 112.1 329 30.7
Pp3c2_3190 Physcomitrium patens HOM05D001739 ORTHO05D004575 1.6e-22 111.3 304 31.9
THA.LOC104807000 Tarenaya hassleriana HOM05D001739 ORTHO05D006605 4.7e-22 109.8 115 50.4
Mapoly0061s0020 Marchantia polymorpha HOM05D001739 ORTHO05D004575 1.1e-21 108.6 294 30.6
AagrBONN_evm.TU.Sc2ySwM_117.3958 Anthoceros agrestis HOM05D001739 ORTHO05D004575 7.5e-20 102.4 301 29.6
COL.COLO4_28302 Corchorus olitorius HOM05D001739 ORTHO05D006605 8.3e-19 99.0 87 62.1
EL10Ac3g07097 Beta vulgaris HOM05D001739 ORTHO05D006605 2.4e-18 97.4 163 38.7
ATR0681G226 Amborella trichopoda HOM05D001739 ORTHO05D004575 4.6e-17 93.2 314 29.6
COL.COLO4_28301 Corchorus olitorius HOM05D001739 ORTHO05D006605 4.6e-17 93.2 140 47.9
Os02g0782100 Oryza sativa ssp. japonica HOM05D001739 ORTHO05D004575 1.7e-16 91.3 227 30.8
SMO361G0459 Selaginella moellendorffii HOM05D001739 ORTHO05D004575 3.9e-16 90.1 299 26.8
FAN04G1199 Fragaria x ananassa HOM05D001739 ORTHO05D006605 3.3e-15 87.0 87 51.7
MBI19_g44839_MAGBIO Magnolia biondii HOM05D001739 ORTHO05D006605 9.5e-15 85.5 108 47.2
Lsat_1_v5_gn_7_35381 Lactuca sativa HOM05D001739 ORTHO05D004575 2.8e-14 84.0 302 29.8
Nn8g40294 Nelumbo nucifera HOM05D001739 ORTHO05D004575 4.7e-14 83.2 293 30.4
Lj4g0016027 Lotus japonicus HOM05D001739 ORTHO05D004575 8.1e-14 82.4 324 27.8
arahy.Tifrunner.gnm1.ann1.SDZ4E8 Arachis hypogaea HOM05D001739 ORTHO05D004575 1.1e-13 82.0 327 29.7
vmacro17095 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 1.1e-13 82.0 317 27.8
vmacro23084 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 1.1e-13 82.0 317 27.8
arahy.Tifrunner.gnm1.ann1.9HZQ4R Arachis hypogaea HOM05D001739 ORTHO05D004575 3.1e-13 80.5 327 29.4
Glyma.17G046900 Glycine max HOM05D001739 ORTHO05D004575 3.1e-13 80.5 302 28.1
CDE12G0121 Ceratophyllum demersum HOM05D001739 ORTHO05D004575 5.2e-13 79.7 314 26.1
Nitab4.5_0007773g0020 Nicotiana tabacum HOM05D001739 ORTHO05D004575 5.2e-13 79.7 303 27.7
DCAR_003861 Daucus carota HOM05D001739 ORTHO05D004575 6.8e-13 79.3 286 27.3
Rhsim05G0003800 Rhododendron simsii HOM05D001739 ORTHO05D004575 6.8e-13 79.3 317 27.8
DCAR_005064 Daucus carota HOM05D001739 ORTHO05D004575 8.9e-13 79.0 274 27.7
GSVIVG01023097001 Vitis vinifera HOM05D001739 ORTHO05D004575 8.9e-13 79.0 317 27.1
PSO421G0331 Papaver somniferum HOM05D001739 ORTHO05D004575 1.5e-12 78.2 293 25.6
Gohir.A07G016500 Gossypium hirsutum HOM05D001739 ORTHO05D004575 2.6e-12 77.4 293 25.9
PSO104G0064 Papaver somniferum HOM05D001739 ORTHO05D004575 2.6e-12 77.4 293 25.9
vmacro17113 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 2.6e-12 77.4 317 28.1
VMungo1215G0229 Vigna mungo HOM05D001739 ORTHO05D004575 2.6e-12 77.4 301 27.2
Medtr1g072890 Medicago truncatula HOM05D001739 ORTHO05D004575 7.6e-12 75.9 299 28.4
Atru.chr7.1752 Acer truncatum HOM05D001739 ORTHO05D004575 1.7e-11 74.7 298 28.2
HanXRQChr09g0273551 Helianthus annuus HOM05D001739 ORTHO05D004575 1.7e-11 74.7 301 29.2
Lalb_Chr13g0299281 Lupinus albus HOM05D001739 ORTHO05D004575 1.7e-11 74.7 300 28.3
Glyma.13G112900 Glycine max HOM05D001739 ORTHO05D004575 2.2e-11 74.3 304 28.0
Aqoxy7G03292 Aquilegia oxysepala HOM05D001739 ORTHO05D004575 2.9e-11 73.9 273 28.6
Cpa.g.sc32.6 Carica papaya HOM05D001739 ORTHO05D004575 2.9e-11 73.9 293 26.3
Sopen07g021980 Solanum pennellii HOM05D001739 ORTHO05D004575 2.9e-11 73.9 303 27.1
CAN.G63.12 Capsicum annuum HOM05D001739 ORTHO05D004575 3.8e-11 73.6 333 25.8
Hma1.2p1_0169F.1_g074380 Hydrangea macrophylla HOM05D001739 ORTHO05D004575 3.8e-11 73.6 293 27.0
CANSAT56G3462 Cannabis sativa HOM05D001739 ORTHO05D004575 8.4e-11 72.4 300 27.0
Manes.16G091500 Manihot esculenta HOM05D001739 ORTHO05D004575 1.9e-10 71.2 298 27.2
Potri.006G137900 Populus trichocarpa HOM05D001739 ORTHO05D004575 2.4e-10 70.9 292 24.0
AUR62019633 Chenopodium quinoa HOM05D001739 ORTHO05D004575 3.2e-10 70.5 343 24.5
Phvul.003G128600 Phaseolus vulgaris HOM05D001739 ORTHO05D004575 3.2e-10 70.5 332 26.8
Sabra18G0055900 Salix brachista HOM05D001739 ORTHO05D004575 3.2e-10 70.5 324 25.6
Lalb_Chr12g0200311 Lupinus albus HOM05D001739 ORTHO05D004575 5.4e-10 69.7 299 28.4
TWI32G0648 Tripterygium wilfordii HOM05D001739 ORTHO05D004575 5.4e-10 69.7 317 26.2
AUR62039592 Chenopodium quinoa HOM05D001739 ORTHO05D004575 7.1e-10 69.3 343 24.5
ECA240G3214 Erigeron canadensis HOM05D001739 ORTHO05D004575 9.2e-10 68.9 273 28.9
HPP92_004359 Vanilla planifolia HOM05D001739 ORTHO05D004575 9.2e-10 68.9 328 25.3
EL10Ac8g19018 Beta vulgaris HOM05D001739 ORTHO05D004575 3.5e-09 67.0 316 26.3
CAN.G333.15 Capsicum annuum HOM05D001739 ORTHO05D004575 4.6e-09 66.6 227 30.8
TPR.G34376 Trifolium pratense HOM05D001739 ORTHO05D004575 6.0e-09 66.2 230 28.3
QL11p002157 Quercus lobata HOM05D001739 ORTHO05D004575 7.8e-09 65.9 326 27.0
Hund23253 Selenicereus undatus HOM05D001739 ORTHO05D004575 1.0e-08 65.5 310 25.5
Ciclev10023308m.g Citrus clementina HOM05D001739 ORTHO05D004575 1.7e-08 64.7 319 26.3
Medtr1g072970 Medicago truncatula HOM05D001739 ORTHO05D004575 2.3e-08 64.3 318 27.4
PGR142G3865 Punica granatum HOM05D001739 ORTHO05D004575 3.0e-08 63.9 317 25.2
SGA_v2.0_scaffold281G46906 Striga asiatica HOM05D001739 ORTHO05D004575 3.0e-08 63.9 321 24.9
Dinv25520 Davidia involucrata HOM05D001739 ORTHO05D004575 3.9e-08 63.5 295 24.4
arahy.Tifrunner.gnm1.ann1.7457H2 Arachis hypogaea HOM05D001739 ORTHO05D004575 5.1e-08 63.2 306 27.8
MD14G1073100 Malus domestica HOM05D001739 ORTHO05D000002 1.1e-07 62.0 57 56.1
Zm00001eb257110 Zea mays HOM05D001739 ORTHO05D004575 5.6e-07 59.7 211 28.4
MSTRG.5982 Avicennia marina HOM05D001739 ORTHO05D004575 1.2e-06 58.5 323 25.1
Ah.09g229240 Amaranthus hybridus HOM05D001739 ORTHO05D004575 2.8e-06 57.4 347 22.8
Sed0004150 Sechium edule HOM05D001739 ORTHO05D004575 2.8e-06 57.4 274 24.5
HanXRQChr04g0122371 Helianthus annuus HOM05D001739 ORTHO05D004575 6.2e-06 56.2 333 26.4
Sed0021617 Sechium edule HOM05D001739 ORTHO05D004575 6.2e-06 56.2 296 24.3
Sc24g0001530 Simmondsia chinensis HOM05D001739 ORTHO05D004575 6.2e-06 56.2 311 25.1


User provided reference genes

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