Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv12487 Davidia involucrata HOM05D007273 ORTHO05D009230 4.1e-159 564.7 290 100.0
Rhsim03G0024900 Rhododendron simsii HOM05D007273 ORTHO05D009230 1.1e-108 397.1 248 77.0
Actinidia39224 Actinidia chinensis HOM05D007273 ORTHO05D009230 2.8e-107 392.5 252 76.6
vmacro07848 Vaccinium macrocarpon HOM05D007273 ORTHO05D009230 6.7e-101 371.3 248 72.6
Nn2g15217 Nelumbo nucifera HOM05D007273 ORTHO05D009230 5.5e-95 351.7 239 70.3
Lsat_1_v5_gn_9_29100 Lactuca sativa HOM05D007273 ORTHO05D009230 1.2e-94 350.5 240 71.2
TAR369G0984 Trochodendron aralioides HOM05D007273 ORTHO05D009230 3.3e-92 342.4 249 65.9
Rhsim03G0024700 Rhododendron simsii HOM05D007273 ORTHO05D009230 7.4e-92 341.3 285 62.1
Solyc02g087600.3 Solanum lycopersicum HOM05D007273 ORTHO05D009230 9.7e-92 340.9 233 67.4
CAN.G417.4 Capsicum annuum HOM05D007273 ORTHO05D009230 1.7e-91 340.1 232 68.5
PGSC0003DMG401001308 Solanum tuberosum HOM05D007273 ORTHO05D009230 1.7e-91 340.1 233 67.4
Nitab4.5_0000082g0140 Nicotiana tabacum HOM05D007273 ORTHO05D009230 2.8e-91 339.3 235 66.8
Sopen02g032350 Solanum pennellii HOM05D007273 ORTHO05D009230 4.8e-91 338.6 233 67.4
Peaxi162Scf00002g02715 Petunia axillaris HOM05D007273 ORTHO05D009230 1.7e-88 330.1 232 66.4
HanXRQChr05g0128781 Helianthus annuus HOM05D007273 ORTHO05D009230 2.5e-87 326.2 249 64.7
Oeu017941.1 Olea europaea HOM05D007273 ORTHO05D009230 2.5e-87 326.2 236 65.3
Cc06_g17580 Coffea canephora HOM05D007273 ORTHO05D009230 5.5e-87 325.1 238 65.5
ECA247G0394 Erigeron canadensis HOM05D007273 ORTHO05D009230 9.4e-87 324.3 238 66.0
EL10Ac3g07092 Beta vulgaris HOM05D007273 ORTHO05D009230 5.7e-84 315.1 239 62.8
SalBow6G5536 Salvia bowleyana HOM05D007273 ORTHO05D009230 1.3e-83 313.9 252 60.3
Aqoxy1G00330 Aquilegia oxysepala HOM05D007273 ORTHO05D009230 4.8e-83 312.0 232 65.1
MSTRG.6428 Avicennia marina HOM05D007273 ORTHO05D009230 4.8e-83 312.0 247 59.9
Sc25g0005300 Simmondsia chinensis HOM05D007273 ORTHO05D009230 8.2e-83 311.2 236 63.1
AUR62024452 Chenopodium quinoa HOM05D007273 ORTHO05D009230 1.8e-82 310.1 234 62.4
DCAR_003245 Daucus carota HOM05D007273 ORTHO05D009230 4.5e-81 305.4 238 61.8
AUR62026041 Chenopodium quinoa HOM05D007273 ORTHO05D009230 2.9e-80 302.8 234 61.1
Migut.J01756 Erythranthe guttata HOM05D007273 ORTHO05D009230 2.5e-79 299.7 226 63.3
PSO339G1789 Papaver somniferum HOM05D007273 ORTHO05D009230 1.4e-77 293.9 277 53.8
PSO384G4400 Papaver somniferum HOM05D007273 ORTHO05D009230 8.8e-77 291.2 246 58.5
Nitab4.5_0010316g0010 Nicotiana tabacum HOM05D007273 ORTHO05D009230 3.1e-74 282.7 228 60.1
Haze_19853 Corylus avellana HOM05D007273 ORTHO05D009230 2.0e-73 280.0 251 57.8
SGA_v2.0_scaffold69G23119 Striga asiatica HOM05D007273 ORTHO05D009230 1.3e-72 277.3 232 59.9
Cfa016813 Carpinus fangiana HOM05D007273 ORTHO05D009230 9.4e-71 271.2 254 56.3
CANSAT80G2704 Cannabis sativa HOM05D007273 ORTHO05D009230 2.7e-70 269.6 239 57.3
CANSAT80G0412 Cannabis sativa HOM05D007273 ORTHO05D009230 3.6e-70 269.2 239 56.9
CiPaw.09G038500 Carya illinoinensis HOM05D007273 ORTHO05D009230 1.0e-69 267.7 246 58.5
Lj1g0021019 Lotus japonicus HOM05D007273 ORTHO05D009230 1.5e-68 263.8 247 56.7
MBI17_g14625_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 7.5e-68 261.5 254 52.8
arahy.Tifrunner.gnm1.ann1.J7IQUN Arachis hypogaea HOM05D007273 ORTHO05D009230 2.8e-67 259.6 238 58.0
RcHm_v2.0_Chr3g0482541 Rosa chinensis HOM05D007273 ORTHO05D009230 2.8e-67 259.6 239 56.1
Ca_08456_v3 Cicer arietinum L. HOM05D007273 ORTHO05D009230 1.6e-65 253.8 233 59.2
Medtr7g091490 Medicago truncatula HOM05D007273 ORTHO05D009230 2.0e-65 253.4 234 57.7
Psat3g072760 Pisum sativum HOM05D007273 ORTHO05D009230 3.5e-65 252.7 244 57.0
VMungo1383G0084 Vigna mungo HOM05D007273 ORTHO05D009230 7.7e-65 251.5 241 54.8
FvH4_6g23860 Fragaria vesca HOM05D007273 ORTHO05D009230 1.7e-64 250.4 240 53.3
Phvul.001G131900 Phaseolus vulgaris HOM05D007273 ORTHO05D009230 1.7e-64 250.4 243 53.5
FAN05G2271 Fragaria x ananassa HOM05D007273 ORTHO05D009230 2.9e-64 249.6 240 52.9
Glyma.03G136600 Glycine max HOM05D007273 ORTHO05D009230 2.9e-64 249.6 239 55.6
Prupe.7G059600 Prunus persica HOM05D007273 ORTHO05D009230 5.0e-64 248.8 236 55.9
Eucgr.A02345 Eucalyptus grandis HOM05D007273 ORTHO05D009230 1.9e-63 246.9 257 51.8
Hma1.2p1_1611F.1_g293550 Hydrangea macrophylla HOM05D007273 ORTHO05D009230 3.6e-62 242.7 177 65.5
QL07p000584 Quercus lobata HOM05D007273 ORTHO05D009230 6.1e-62 241.9 254 53.9
Lalb_Chr01g0017311 Lupinus albus HOM05D007273 ORTHO05D009230 1.4e-61 240.7 238 55.5
TWI74G1215 Tripterygium wilfordii HOM05D007273 ORTHO05D009230 4.0e-61 239.2 238 50.4
ClCG04G000150 Citrullus lanatus HOM05D007273 ORTHO05D009230 6.8e-61 238.4 243 53.1
Sabra06G0036200 Salix brachista HOM05D007273 ORTHO05D009230 2.6e-60 236.5 245 53.9
CsaV3_4G011670 Cucumis sativus L. HOM05D007273 ORTHO05D009230 7.5e-60 235.0 240 51.2
Carub.0004s2403 Capsella rubella HOM05D007273 ORTHO05D009230 3.1e-58 229.6 247 50.6
Potri.006G051600 Populus trichocarpa HOM05D007273 ORTHO05D009230 3.1e-58 229.6 238 52.9
PGR004G1947 Punica granatum HOM05D007273 ORTHO05D009230 3.1e-58 229.6 211 58.3
Manes.09G022200 Manihot esculenta HOM05D007273 ORTHO05D009230 4.1e-58 229.2 245 51.4
HPP92_016047 Vanilla planifolia HOM05D007273 ORTHO05D009230 4.5e-57 225.7 238 50.8
C04p02970 Brassica napus HOM05D007273 ORTHO05D009230 5.9e-57 225.3 249 50.2
BolC4t21937H Brassica oleracea HOM05D003650 ORTHO05D004213 1.0e-56 224.6 250 49.6
CARHR136850 Cardamine hirsuta HOM05D007273 ORTHO05D009230 1.0e-56 224.6 250 49.2
Gohir.D09G118000 Gossypium hirsutum HOM05D007273 ORTHO05D009230 1.0e-56 224.6 242 48.3
THA.LOC104802102 Tarenaya hassleriana HOM05D007273 ORTHO05D009230 1.0e-56 224.6 237 52.3
A05p02510 Brassica napus HOM05D007273 ORTHO05D009230 2.3e-56 223.4 249 50.6
BraA05t19244Z Brassica rapa HOM05D007273 ORTHO05D009230 2.3e-56 223.4 249 50.6
Ciclev10033324m.g Citrus clementina HOM05D007273 ORTHO05D009230 2.3e-56 223.4 238 50.8
Gorai.006G136300 Gossypium raimondii HOM05D007273 ORTHO05D009230 2.3e-56 223.4 242 47.9
AL4G40060 Arabidopsis lyrata HOM05D007273 ORTHO05D009230 2.9e-56 223.0 248 49.2
AT2G41750 Arabidopsis thaliana HOM05D007273 ORTHO05D009230 3.8e-56 222.6 250 49.6
Thhalv10017127m.g Eutrema salsugineum HOM05D007273 ORTHO05D009230 5.0e-56 222.2 249 49.8
Thecc.05G153100 Theobroma cacao HOM05D007273 ORTHO05D009230 5.0e-56 222.2 241 48.5
COL.COLO4_28286 Corchorus olitorius HOM05D007273 ORTHO05D009230 6.6e-56 221.9 243 47.7
Cpa.g.sc92.54 Carica papaya HOM05D007273 ORTHO05D009230 5.6e-55 218.8 237 51.1
Gohir.A09G121900 Gossypium hirsutum HOM05D007273 ORTHO05D009230 5.6e-55 218.8 240 47.5
BcaNung02834 Brassica carinata HOM05D007273 ORTHO05D009230 7.3e-55 218.4 252 48.0
MBI17_g36895_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 7.3e-55 218.4 173 61.3
SEGI_31103 Sequoiadendron giganteum HOM05D007273 ORTHO05D009230 1.6e-54 217.2 266 42.9
Sp4g24020 Schrenkiella parvula HOM05D007273 ORTHO05D009230 1.8e-53 213.8 250 47.6
Aa31LG1G23760 Aethionema arabicum HOM05D007273 ORTHO05D009230 8.9e-53 211.5 249 47.0
Sed0019353 Sechium edule HOM05D007273 ORTHO05D009230 1.2e-52 211.1 243 48.6
Rhsim03G0024400 Rhododendron simsii HOM05D007273 ORTHO05D009230 2.0e-52 210.3 144 72.2
Rhsim03G0024300 Rhododendron simsii HOM05D007273 ORTHO05D009230 1.7e-51 207.2 144 71.5
Os12g0142600 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 1.2e-49 201.1 244 47.1
Os11g0145100 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 1.6e-49 200.7 245 47.8
Pp3c17_17160 Physcomitrium patens HOM05D007273 ORTHO05D009230 3.5e-49 199.5 317 36.6
Mapoly0023s0152 Marchantia polymorpha HOM05D007273 ORTHO05D009230 7.8e-49 198.4 287 40.8
ATR0626G250 Amborella trichopoda HOM05D007273 ORTHO05D009230 1.6e-41 174.1 339 32.7
Ah.04g151620 Amaranthus hybridus HOM05D007273 ORTHO05D009230 6.6e-40 168.7 241 41.9
CSS0001142 Camellia sinensis var. sinensis HOM05D007273 ORTHO05D009230 8.6e-40 168.3 101 77.2
Zm00001eb163370 Zea mays HOM05D007273 ORTHO05D009230 3.3e-39 166.4 240 42.1
SMO240G0020 Selaginella moellendorffii HOM05D007273 ORTHO05D009230 2.3e-37 160.2 205 49.3
FAN09G1358 Fragaria x ananassa HOM05D007273 ORTHO05D009230 1.5e-36 157.5 179 50.3
unitig_8.g4551 Utricularia gibba HOM05D007273 ORTHO05D009230 3.7e-35 152.9 122 63.9
Lju124C41T6 Lonicera japonica HOM05D007273 ORTHO05D009230 6.4e-35 152.1 106 71.7
Rhsim03G0023900 Rhododendron simsii HOM05D007273 ORTHO05D009230 1.1e-31 141.4 144 52.8
FAN02G1642 Fragaria x ananassa HOM05D007273 ORTHO05D009230 2.0e-28 130.6 138 47.1
Glyma.19G139000 Glycine max HOM05D007273 ORTHO05D009230 1.9e-23 114.0 96 60.4
AagrBONN_evm.TU.Sc2ySwM_228.793 Anthoceros agrestis HOM05D007273 ORTHO05D009230 1.4e-21 107.8 190 35.8
Actinidia09327 Actinidia chinensis HOM05D007273 ORTHO05D009230 1.9e-18 97.4 125 46.4
MCO07G627 Micromonas commoda HOM05D007273 ORTHO05D009230 2.0e-12 77.4 264 26.9
TPR.G3731 Trifolium pratense HOM05D007273 ORTHO05D009230 9.9e-12 75.1 62 69.4
SEGI_36701 Sequoiadendron giganteum HOM05D007003 ORTHO05D008499 1.9e-10 70.9 259 23.6
SMO339G0013 Selaginella moellendorffii HOM05D007003 ORTHO05D008499 1.5e-07 61.2 271 22.1
Cpa.g.sc28.27 Carica papaya HOM05D007273 ORTHO05D009230 9.6e-07 58.5 69 44.9


User provided reference genes

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