Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv12464 Davidia involucrata HOM05D004621 ORTHO05D005817 2.7e-62 241.9 130 100.0
GSVIVG01035427001 Vitis vinifera HOM05D004621 ORTHO05D005817 8.3e-43 177.2 120 78.3
Ciclev10010180m.g Citrus clementina HOM05D004621 ORTHO05D005817 3.2e-42 175.3 124 76.6
Hma1.2p1_0196F.1_g084950 Hydrangea macrophylla HOM05D004621 ORTHO05D005817 3.2e-42 175.3 122 77.9
Hma1.2p1_0231F.1_g097600 Hydrangea macrophylla HOM05D004621 ORTHO05D005817 1.2e-41 173.3 120 78.3
Thecc.09G059300 Theobroma cacao HOM05D004621 ORTHO05D005817 4.6e-41 171.4 122 75.4
CANSAT21G1762 Cannabis sativa HOM05D004621 ORTHO05D005817 6.0e-41 171.0 116 75.0
Lj8A491T35 Lonicera japonica HOM05D004621 ORTHO05D005817 7.8e-41 170.6 96 90.6
Lj8A495T43 Lonicera japonica HOM05D004621 ORTHO05D005817 7.8e-41 170.6 122 76.2
Atru.chr7.1890 Acer truncatum HOM05D004621 ORTHO05D005817 1.0e-40 170.2 123 75.6
Atru.chr7.1918 Acer truncatum HOM05D004621 ORTHO05D005817 1.0e-40 170.2 123 75.6
MBI05_g23629_MAGBIO Magnolia biondii HOM05D004621 ORTHO05D005817 1.0e-40 170.2 116 75.0
Manes.16G083500 Manihot esculenta HOM05D004621 ORTHO05D005817 1.0e-40 170.2 125 72.8
Gohir.A05G040100 Gossypium hirsutum HOM05D004621 ORTHO05D005817 5.0e-40 167.9 122 73.0
Gohir.D05G041600 Gossypium hirsutum HOM05D004621 ORTHO05D005817 5.0e-40 167.9 122 73.0
Gorai.009G042200 Gossypium raimondii HOM05D004621 ORTHO05D005817 5.0e-40 167.9 122 73.0
Rhsim05G0135500 Rhododendron simsii HOM05D004621 ORTHO05D005817 5.0e-40 167.9 118 72.0
Lsat_1_v5_gn_5_78680 Lactuca sativa HOM05D004621 ORTHO05D005817 6.6e-40 167.5 117 76.9
TAR624G1267 Trochodendron aralioides HOM05D004621 ORTHO05D005817 1.1e-39 166.8 117 76.9
COL.COLO4_21108 Corchorus olitorius HOM05D004621 ORTHO05D005817 1.9e-39 166.0 122 72.1
Cfa017997 Carpinus fangiana HOM05D004621 ORTHO05D005817 3.3e-39 165.2 117 74.4
QL02p000390 Quercus lobata HOM05D004621 ORTHO05D005817 9.5e-39 163.7 110 77.3
TWI32G0723 Tripterygium wilfordii HOM05D004621 ORTHO05D005817 1.2e-38 163.3 119 77.3
Aqoxy2G03981 Aquilegia oxysepala HOM05D004621 ORTHO05D005817 1.6e-38 162.9 113 73.5
Duzib168G0020 Durio zibethinus HOM05D004621 ORTHO05D005817 1.6e-38 162.9 122 72.1
Haze_18137 Corylus avellana HOM05D004621 ORTHO05D005817 2.1e-38 162.5 117 72.6
Sabra06G0173000 Salix brachista HOM05D004621 ORTHO05D005817 2.1e-38 162.5 108 78.7
ECA234G1492 Erigeron canadensis HOM05D004621 ORTHO05D005817 2.8e-38 162.2 114 73.7
Potri.006G224000 Populus trichocarpa HOM05D004621 ORTHO05D005817 3.6e-38 161.8 127 69.3
Nitab4.5_0000286g0110 Nicotiana tabacum HOM05D004621 ORTHO05D005817 6.2e-38 161.0 117 71.8
HanXRQChr10g0309801 Helianthus annuus HOM05D004621 ORTHO05D005817 8.0e-38 160.6 113 75.2
MD15G1053900 Malus domestica HOM05D004621 ORTHO05D005817 8.0e-38 160.6 119 71.4
Sc09g0009980 Simmondsia chinensis HOM05D004621 ORTHO05D005817 1.1e-37 160.2 117 70.1
unitig_88.g27672 Utricularia gibba HOM05D004621 ORTHO05D005817 1.1e-37 160.2 117 70.9
Nn6g35569 Nelumbo nucifera HOM05D004621 ORTHO05D005817 1.8e-37 159.5 117 70.9
EL10Ac2g03807 Beta vulgaris HOM05D004621 ORTHO05D005817 2.3e-37 159.1 134 65.7
Eucgr.C00676 Eucalyptus grandis HOM05D004621 ORTHO05D005817 2.3e-37 159.1 114 73.7
Ah.10g034040 Amaranthus hybridus HOM05D004621 ORTHO05D005817 3.1e-37 158.7 101 77.2
Nitab4.5_0009148g0020 Nicotiana tabacum HOM05D004621 ORTHO05D005817 4.0e-37 158.3 117 70.9
SalBow4G1696 Salvia bowleyana HOM05D004621 ORTHO05D005817 4.0e-37 158.3 120 70.0
Prupe.1G407400 Prunus persica HOM05D004621 ORTHO05D005817 8.9e-37 157.1 119 70.6
RcHm_v2.0_Chr6g0311441 Rosa chinensis HOM05D004621 ORTHO05D005817 8.9e-37 157.1 121 68.6
Hund19431 Selenicereus undatus HOM05D004621 ORTHO05D005817 8.9e-37 157.1 113 75.2
Migut.A00101 Erythranthe guttata HOM05D004621 ORTHO05D005817 1.2e-36 156.8 122 70.5
arahy.Tifrunner.gnm1.ann1.I8I12Q Arachis hypogaea HOM05D004621 ORTHO05D005817 1.5e-36 156.4 108 75.0
FAN15G0359 Fragaria x ananassa HOM05D004621 ORTHO05D005817 1.5e-36 156.4 121 68.6
Cpa.g.sc126.50 Carica papaya HOM05D004621 ORTHO05D005817 2.0e-36 156.0 120 66.7
FAN27G1750 Fragaria x ananassa HOM05D004621 ORTHO05D005817 2.6e-36 155.6 121 68.6
Peaxi162Scf01253g00025 Petunia axillaris HOM05D004621 ORTHO05D005817 2.6e-36 155.6 109 74.3
PGSC0003DMG400008208 Solanum tuberosum HOM05D004621 ORTHO05D005817 2.6e-36 155.6 117 70.1
ClCG05G018120 Citrullus lanatus HOM05D004621 ORTHO05D005817 4.4e-36 154.8 116 68.1
Cc08_g11070 Coffea canephora HOM05D004621 ORTHO05D005817 4.4e-36 154.8 120 70.0
FAN20G0813 Fragaria x ananassa HOM05D004621 ORTHO05D005817 4.4e-36 154.8 121 67.8
SGA_v2.0_scaffold20G09183 Striga asiatica HOM05D004621 ORTHO05D005817 4.4e-36 154.8 110 73.6
arahy.Tifrunner.gnm1.ann1.T7L0BR Arachis hypogaea HOM05D004621 ORTHO05D005817 5.8e-36 154.5 108 74.1
Sopen08g017990 Solanum pennellii HOM05D004621 ORTHO05D005817 7.5e-36 154.1 119 68.9
FAN24G3059 Fragaria x ananassa HOM05D004621 ORTHO05D005817 1.3e-35 153.3 127 63.8
PSO210G1875 Papaver somniferum HOM05D004621 ORTHO05D005817 1.7e-35 152.9 117 67.5
Phvul.009G080100 Phaseolus vulgaris HOM05D004621 ORTHO05D005817 2.2e-35 152.5 99 76.8
Sed0025089 Sechium edule HOM05D004621 ORTHO05D005817 2.2e-35 152.5 109 71.6
Solyc08g062560.4 Solanum lycopersicum HOM05D004621 ORTHO05D005817 2.2e-35 152.5 119 68.1
THA.LOC104811228 Tarenaya hassleriana HOM05D004621 ORTHO05D005817 2.2e-35 152.5 117 68.4
VMungo1309G3014 Vigna mungo HOM05D004621 ORTHO05D005817 2.9e-35 152.1 102 73.5
FvH4_2g31380 Fragaria vesca HOM05D004621 ORTHO05D005817 3.7e-35 151.8 121 66.1
Glyma.04G054300 Glycine max HOM05D004621 ORTHO05D005817 3.7e-35 151.8 114 67.5
CsaV3_4G035890 Cucumis sativus L. HOM05D004621 ORTHO05D005817 4.9e-35 151.4 116 66.4
TPR.G3533 Trifolium pratense HOM05D004621 ORTHO05D005817 4.9e-35 151.4 102 74.5
Glyma.06G054600 Glycine max HOM05D004621 ORTHO05D005817 6.4e-35 151.0 99 76.8
PSO210G2988 Papaver somniferum HOM05D004621 ORTHO05D005817 6.4e-35 151.0 117 67.5
MELO3C016896.2 Cucumis melo HOM05D004621 ORTHO05D005817 8.3e-35 150.6 116 65.5
Psat5g035360 Pisum sativum HOM05D004621 ORTHO05D005817 1.4e-34 149.8 115 68.7
Ca_15845_v3 Cicer arietinum L. HOM05D004621 ORTHO05D005817 1.9e-34 149.4 98 77.6
Oeu018033.1 Olea europaea HOM05D004621 ORTHO05D005817 1.9e-34 149.4 117 68.4
Lalb_Chr11g0063251 Lupinus albus HOM05D004621 ORTHO05D005817 4.1e-34 148.3 102 68.6
DCAR_007741 Daucus carota HOM05D004621 ORTHO05D005817 5.4e-34 147.9 107 72.9
Lj1g0023758 Lotus japonicus HOM05D004621 ORTHO05D005817 7.0e-34 147.5 100 71.0
FAN17G2977 Fragaria x ananassa HOM05D004621 ORTHO05D005817 9.2e-34 147.1 106 69.8
PGR031G3863 Punica granatum HOM05D004621 ORTHO05D005817 1.2e-33 146.7 121 69.4
vmacro19714 Vaccinium macrocarpon HOM05D004621 ORTHO05D005817 1.2e-33 146.7 173 51.4
Medtr3g104760 Medicago truncatula HOM05D004621 ORTHO05D005817 1.6e-33 146.4 119 64.7
AUR62009103 Chenopodium quinoa HOM05D004621 ORTHO05D005817 2.1e-33 146.0 103 67.0
AUR62020569 Chenopodium quinoa HOM05D004621 ORTHO05D005817 2.7e-33 145.6 103 67.0
Sp2g21560 Schrenkiella parvula HOM05D004621 ORTHO05D005817 6.0e-33 144.4 117 66.7
HPP92_023989 Vanilla planifolia HOM05D004621 ORTHO05D005817 1.0e-32 143.7 97 72.2
MSTRG.25978 Avicennia marina HOM05D004621 ORTHO05D005817 1.7e-32 142.9 119 63.9
Thhalv10004076m.g Eutrema salsugineum HOM05D004621 ORTHO05D005817 3.0e-32 142.1 117 67.5
HPP92_023996 Vanilla planifolia HOM05D004621 ORTHO05D005817 3.9e-32 141.7 97 71.1
AL6G38190 Arabidopsis lyrata HOM05D004621 ORTHO05D005817 8.6e-32 140.6 95 73.7
ATR0051G016 Amborella trichopoda HOM05D004621 ORTHO05D005817 1.1e-31 140.2 92 71.7
Aa31LG1G21020 Aethionema arabicum HOM05D004621 ORTHO05D005817 4.3e-31 138.3 117 65.0
A02p39240 Brassica napus HOM05D004621 ORTHO05D005817 5.6e-31 137.9 117 63.2
BraA02t08889Z Brassica rapa HOM05D004621 ORTHO05D005817 5.6e-31 137.9 117 63.2
Carub.0006s2397 Capsella rubella HOM05D004621 ORTHO05D005817 5.6e-31 137.9 115 62.6
CARHR187480 Cardamine hirsuta HOM05D004621 ORTHO05D005817 7.3e-31 137.5 97 70.1
BcaB07g29951 Brassica carinata HOM05D004621 ORTHO05D005817 1.6e-30 136.3 95 71.6
A09p05980 Brassica napus HOM05D004621 ORTHO05D005817 1.6e-30 136.3 117 63.2
BcaC03g17845 Brassica carinata HOM05D004621 ORTHO05D005817 2.1e-30 136.0 117 62.4
C02p58840 Brassica napus HOM05D004621 ORTHO05D005817 2.1e-30 136.0 117 62.4
BcaC04g23605 Brassica carinata HOM05D004621 ORTHO05D005817 2.8e-30 135.6 117 63.2
BolC2t11942H Brassica oleracea HOM05D004621 ORTHO05D005817 4.7e-30 134.8 117 61.5
SEGI_04699 Sequoiadendron giganteum HOM05D004621 ORTHO05D005817 6.2e-30 134.4 100 68.0
Zm00001eb240170 Zea mays HOM05D004621 ORTHO05D005817 6.2e-30 134.4 93 71.0
BcaB04g19746 Brassica carinata HOM05D004621 ORTHO05D005817 8.1e-30 134.0 118 62.7
C09p06540 Brassica napus HOM05D004621 ORTHO05D005817 8.1e-30 134.0 117 62.4
BraA09t36240Z Brassica rapa HOM05D004621 ORTHO05D005817 8.1e-30 134.0 117 61.5
BolC9t53577H Brassica oleracea HOM05D004621 ORTHO05D005817 1.1e-29 133.7 117 62.4
Os02g0217800 Oryza sativa ssp. japonica HOM05D004621 ORTHO05D005817 3.1e-29 132.1 93 69.9
SHI18707 Sapria himalayana HOM05D004621 ORTHO05D005817 5.2e-29 131.3 99 64.6
AT5G26180 Arabidopsis thaliana HOM05D004621 ORTHO05D005817 1.2e-28 130.2 92 68.5
BcaB07g29949 Brassica carinata HOM05D004621 ORTHO05D005817 4.6e-25 118.2 89 65.2
BcaB04g19747 Brassica carinata HOM05D004621 ORTHO05D005817 1.3e-24 116.7 85 70.6
Atru.chr7.1917 Acer truncatum HOM05D004621 ORTHO05D005817 1.4e-21 106.7 120 56.7
Atru.chr7.1889 Acer truncatum HOM05D004621 ORTHO05D005817 5.2e-21 104.8 120 55.8
CSS0016381 Camellia sinensis var. sinensis HOM05D004621 ORTHO05D005817 3.8e-19 98.6 80 68.8
SMO169G0045 Selaginella moellendorffii HOM05D004621 ORTHO05D005817 1.3e-16 90.1 91 48.4
Pp3c1_12750 Physcomitrium patens HOM05D004621 ORTHO05D005817 3.0e-16 89.0 87 51.7
AagrBONN_evm.TU.Sc2ySwM_228.3331 Anthoceros agrestis HOM05D004621 ORTHO05D005817 1.5e-15 86.7 88 50.0
Mapoly0057s0032 Marchantia polymorpha HOM05D004621 ORTHO05D005817 1.6e-14 83.2 117 39.3
CBR_g41718 Chara braunii HOM05D004621 ORTHO05D005817 1.3e-11 73.6 84 45.2
Lsat_1_v5_gn_1_100981 Lactuca sativa HOM05D004621 ORTHO05D005817 4.6e-09 65.1 37 83.8
Lsat_1_v5_gn_4_64761 Lactuca sativa HOM05D004621 ORTHO05D005817 4.6e-09 65.1 37 83.8
Lsat_1_v5_gn_1_16680 Lactuca sativa HOM05D004621 ORTHO05D005817 6.0e-09 64.7 36 86.1
Lsat_1_v5_gn_1_46680 Lactuca sativa HOM05D004621 ORTHO05D005817 6.0e-09 64.7 36 86.1
Lsat_1_v5_gn_2_21720 Lactuca sativa HOM05D004621 ORTHO05D005817 6.0e-09 64.7 36 86.1
Lsat_1_v5_gn_4_98001 Lactuca sativa HOM05D004621 ORTHO05D005817 6.0e-09 64.7 36 86.1
Lsat_1_v5_gn_5_184340 Lactuca sativa HOM05D004621 ORTHO05D005817 6.0e-09 64.7 36 86.1
Lsat_1_v5_gn_5_92240 Lactuca sativa HOM05D004621 ORTHO05D005817 6.0e-09 64.7 36 86.1
Lsat_1_v5_gn_6_36380 Lactuca sativa HOM05D004621 ORTHO05D005817 6.0e-09 64.7 36 86.1
FAN02G1541 Fragaria x ananassa HOM05D004621 ORTHO05D005817 6.2e-06 54.7 93 40.9


User provided reference genes

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