Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv12459 Davidia involucrata HOM05D007141 ORTHO05D008975 4.0e-68 261.2 120 100.0
CSS0014882 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 2.0e-38 162.5 87 85.1
CSS0018983 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 7.4e-38 160.6 87 83.9
Oeu034195.1 Olea europaea HOM05D007141 ORTHO05D008975 5.3e-36 154.5 91 76.9
Cc08_g11030 Coffea canephora HOM05D007141 ORTHO05D008975 2.6e-35 152.1 89 76.4
SalBow4G0322 Salvia bowleyana HOM05D007141 ORTHO05D008975 5.9e-35 151.0 91 75.8
Actinidia25707 Actinidia chinensis HOM05D007141 ORTHO05D008975 7.7e-35 150.6 90 78.9
Rhsim05G0069200 Rhododendron simsii HOM05D007141 ORTHO05D008975 3.6e-32 141.7 88 73.9
vmacro22570 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 4.7e-32 141.4 92 70.7
Nitab4.5_0002797g0020 Nicotiana tabacum HOM05D007141 ORTHO05D008975 8.0e-32 140.6 90 73.3
Thecc.09G058700 Theobroma cacao HOM05D007141 ORTHO05D008975 3.0e-31 138.7 86 73.3
Gohir.A07G021200 Gossypium hirsutum HOM05D007141 ORTHO05D008975 3.9e-31 138.3 75 78.7
CAN.G1181.10 Capsicum annuum HOM05D007141 ORTHO05D008975 5.2e-31 137.9 91 71.4
vmacro17441 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 6.7e-31 137.5 88 71.6
DCAR_003142 Daucus carota HOM05D007141 ORTHO05D008975 3.3e-30 135.2 88 69.3
Gohir.D07G020900 Gossypium hirsutum HOM05D007141 ORTHO05D008975 3.3e-30 135.2 75 77.3
Gorai.001G021700 Gossypium raimondii HOM05D007141 ORTHO05D008975 3.3e-30 135.2 75 77.3
CiPaw.15G035700 Carya illinoinensis HOM05D007141 ORTHO05D008975 5.7e-30 134.4 97 66.0
Duzib150G0643 Durio zibethinus HOM05D007141 ORTHO05D008975 5.7e-30 134.4 85 71.8
Ciclev10010008m.g Citrus clementina HOM05D007141 ORTHO05D008975 7.4e-30 134.0 98 67.3
Haze_18140 Corylus avellana HOM05D007141 ORTHO05D008975 9.7e-30 133.7 84 73.8
Migut.A00104 Erythranthe guttata HOM05D007141 ORTHO05D008975 9.7e-30 133.7 91 65.9
Lsat_1_v5_gn_5_78660 Lactuca sativa HOM05D007141 ORTHO05D008975 2.8e-29 132.1 77 77.9
Atru.chr7.1922 Acer truncatum HOM05D007141 ORTHO05D008975 8.2e-29 130.6 83 69.9
Manes.16G083100 Manihot esculenta HOM05D007141 ORTHO05D008975 1.4e-28 129.8 73 82.2
ClCG08G009990 Citrullus lanatus HOM05D000426 ORTHO05D000328 2.4e-28 129.0 81 71.6
Hund03309 Selenicereus undatus HOM05D007141 ORTHO05D008975 3.1e-28 128.6 90 66.7
Solyc08g062620.3 Solanum lycopersicum HOM05D007141 ORTHO05D008975 3.1e-28 128.6 90 67.8
Sopen08g018140 Solanum pennellii HOM05D007141 ORTHO05D008975 3.1e-28 128.6 90 67.8
GSVIVG01035422001 Vitis vinifera HOM05D007141 ORTHO05D008975 4.1e-28 128.3 83 68.7
Prupe.1G407800 Prunus persica HOM05D007141 ORTHO05D008975 7.0e-28 127.5 92 69.6
QL02p000427 Quercus lobata HOM05D007141 ORTHO05D008975 9.1e-28 127.1 70 78.6
MELO3C011470.2 Cucumis melo HOM05D007141 ORTHO05D008975 1.2e-27 126.7 76 73.7
HanXRQChr10g0309781 Helianthus annuus HOM05D007141 ORTHO05D008975 1.2e-27 126.7 73 74.0
RcHm_v2.0_Chr6g0311391 Rosa chinensis HOM05D007141 ORTHO05D008975 1.2e-27 126.7 86 68.6
RcHm_v2.0_Chr7g0222241 Rosa chinensis HOM05D007141 ORTHO05D008975 1.6e-27 126.3 87 67.8
Sabra06G0173500 Salix brachista HOM05D007141 ORTHO05D008975 1.6e-27 126.3 73 76.7
PGSC0003DMG400008211 Solanum tuberosum HOM05D007141 ORTHO05D008975 1.6e-27 126.3 87 69.0
Potri.006G224400 Populus trichocarpa HOM05D007141 ORTHO05D008975 2.0e-27 125.9 73 76.7
CsaV3_6G032120 Cucumis sativus L. HOM05D007141 ORTHO05D008975 3.5e-27 125.2 76 72.4
ECA234G1667 Erigeron canadensis HOM05D007141 ORTHO05D008975 4.5e-27 124.8 76 73.7
arahy.Tifrunner.gnm1.ann1.L1P6F7 Arachis hypogaea HOM05D007141 ORTHO05D008975 7.7e-27 124.0 72 76.4
Eucgr.L02859 Eucalyptus grandis HOM05D007141 ORTHO05D008975 1.0e-26 123.6 80 72.5
FAN15G0931 Fragaria x ananassa HOM05D007141 ORTHO05D008975 1.0e-26 123.6 91 65.9
Glyma.06G053600 Glycine max HOM05D007141 ORTHO05D008975 1.3e-26 123.2 74 73.0
FAN24G3331 Fragaria x ananassa HOM05D007141 ORTHO05D008975 1.7e-26 122.9 79 73.4
FAN27G0109 Fragaria x ananassa HOM05D007141 ORTHO05D008975 2.2e-26 122.5 91 63.7
FvH4_2g31430 Fragaria vesca HOM05D007141 ORTHO05D008975 2.9e-26 122.1 91 64.8
Hma1.2p1_0644F.1_g194800 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 5.0e-26 121.3 55 96.4
Hma1.2p1_1832F.1_g304585 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 5.0e-26 121.3 55 96.4
Phvul.009G079400 Phaseolus vulgaris HOM05D007141 ORTHO05D008975 8.5e-26 120.6 74 74.3
EL10Ac2g03813 Beta vulgaris HOM05D007141 ORTHO05D008975 1.1e-25 120.2 88 63.6
MD08G1066900 Malus domestica HOM05D007141 ORTHO05D008975 1.1e-25 120.2 76 69.7
VMungo1309G2876 Vigna mungo HOM05D007141 ORTHO05D008975 1.1e-25 120.2 74 73.0
AL7G18460 Arabidopsis lyrata HOM05D007141 ORTHO05D008975 1.9e-25 119.4 90 58.9
CARHR241130 Cardamine hirsuta HOM05D007141 ORTHO05D008975 3.2e-25 118.6 88 61.4
AUR62009107 Chenopodium quinoa HOM05D007141 ORTHO05D008975 3.2e-25 118.6 77 74.0
Ah.10g034080 Amaranthus hybridus HOM05D007141 ORTHO05D008975 5.5e-25 117.9 98 60.2
BraA08t33728Z Brassica rapa HOM05D007141 ORTHO05D008975 7.2e-25 117.5 90 57.8
Carub.0007s0735 Capsella rubella HOM05D007141 ORTHO05D008975 9.4e-25 117.1 86 60.5
Sed0026589 Sechium edule HOM05D007141 ORTHO05D008975 9.4e-25 117.1 76 67.1
AT4G33100 Arabidopsis thaliana HOM05D007141 ORTHO05D008975 1.2e-24 116.7 91 59.3
Thhalv10026676m.g Eutrema salsugineum HOM05D007141 ORTHO05D008975 1.2e-24 116.7 86 61.6
C03p86820 Brassica napus HOM05D007141 ORTHO05D008975 1.6e-24 116.3 90 57.8
CANSAT25G2947 Cannabis sativa HOM05D007141 ORTHO05D008975 1.6e-24 116.3 70 72.9
A08p17770 Brassica napus HOM05D007141 ORTHO05D008975 2.1e-24 115.9 90 56.7
MD08G1067500 Malus domestica HOM05D007141 ORTHO05D008975 4.7e-24 114.8 76 65.8
MD09G1070200 Malus domestica HOM05D007141 ORTHO05D008975 4.7e-24 114.8 76 65.8
Lj1g0005823 Lotus japonicus HOM05D007141 ORTHO05D008975 8.0e-24 114.0 74 67.6
Sp7g30850 Schrenkiella parvula HOM05D007141 ORTHO05D008975 1.0e-23 113.6 90 55.6
unitig_88.g27673 Utricularia gibba HOM05D007141 ORTHO05D008975 1.0e-23 113.6 76 64.5
BolC3t20976H Brassica oleracea HOM05D007141 ORTHO05D008975 1.4e-23 113.2 90 57.8
Aa31LG1G7350 Aethionema arabicum HOM05D007141 ORTHO05D008975 1.8e-23 112.8 89 60.7
CDE07G1700 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 1.8e-23 112.8 79 62.0
Lalb_Chr08g0244921 Lupinus albus HOM05D007141 ORTHO05D008975 2.3e-23 112.5 62 77.4
TWI34G1430 Tripterygium wilfordii HOM05D007141 ORTHO05D008975 2.3e-23 112.5 74 73.0
unitig_0.g2555 Utricularia gibba HOM05D007141 ORTHO05D008975 2.3e-23 112.5 90 56.7
Psat5g035560 Pisum sativum HOM05D007141 ORTHO05D008975 8.8e-23 110.5 72 65.3
PSO832G0110 Papaver somniferum HOM05D007141 ORTHO05D008975 1.2e-22 110.2 74 67.6
BcaC09g52107 Brassica carinata HOM05D007141 ORTHO05D008975 2.0e-22 109.4 84 59.5
A01p05100 Brassica napus HOM05D007141 ORTHO05D008975 4.4e-22 108.2 84 59.5
C01p05580 Brassica napus HOM05D007141 ORTHO05D008975 4.4e-22 108.2 84 58.3
BraA01t00493Z Brassica rapa HOM05D007141 ORTHO05D008975 4.4e-22 108.2 84 59.5
Eucgr.C03070 Eucalyptus grandis HOM05D007141 ORTHO05D008975 7.5e-22 107.5 117 50.4
Sc09g0009950 Simmondsia chinensis HOM05D007141 ORTHO05D008975 9.7e-22 107.1 57 78.9
MBI11_g07534_MAGBIO Magnolia biondii HOM05D007141 ORTHO05D008975 1.3e-21 106.7 101 49.5
TPR.G3578 Trifolium pratense HOM05D007141 ORTHO05D008975 1.3e-21 106.7 67 68.7
BolC1t00538H Brassica oleracea HOM05D007141 ORTHO05D008975 2.2e-21 105.9 84 57.1
CDE06G2239 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 4.8e-21 104.8 74 63.5
BcaC09g52111 Brassica carinata HOM05D007141 ORTHO05D008975 1.1e-20 103.6 87 56.3
Medtr3g104730 Medicago truncatula HOM05D007141 ORTHO05D008975 1.1e-20 103.6 70 64.3
ATR0051G046 Amborella trichopoda HOM05D007141 ORTHO05D008975 1.6e-19 99.8 56 73.2
THA.LOC104819900 Tarenaya hassleriana HOM05D007141 ORTHO05D008975 1.6e-19 99.8 107 48.6
CAN.G11.20 Capsicum annuum HOM05D007141 ORTHO05D008975 3.5e-19 98.6 63 71.4
SEGI_38617 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 5.9e-19 97.8 62 64.5
HPP92_022917 Vanilla planifolia HOM05D007141 ORTHO05D008975 4.2e-17 91.7 60 65.0
HPP92_022928 Vanilla planifolia HOM05D007141 ORTHO05D008975 4.2e-17 91.7 60 65.0
Atru.BG.111.p Acer truncatum HOM05D007141 ORTHO05D008975 2.1e-16 89.4 54 74.1
Zm00001eb310860 Zea mays HOM05D007141 ORTHO05D008975 3.6e-16 88.6 62 53.2
Mapoly0108s0048 Marchantia polymorpha HOM05D007141 ORTHO05D008975 4.7e-16 88.2 66 54.5
Os09g0361700 Oryza sativa ssp. japonica HOM05D007141 ORTHO05D008975 1.8e-15 86.3 54 63.0
SEGI_00789 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 2.6e-14 82.4 67 55.2
Cfa017995 Carpinus fangiana HOM05D007141 ORTHO05D008975 9.8e-14 80.5 49 71.4
AUR62020564 Chenopodium quinoa HOM05D007141 ORTHO05D008975 1.4e-12 76.6 58 60.3
AUR62020560 Chenopodium quinoa HOM05D007141 ORTHO05D008975 2.0e-11 72.8 57 59.6
FvH4_2g16451 Fragaria vesca HOM05D007141 ORTHO05D008975 2.1e-08 62.8 42 66.7
Peaxi162Scf00070g00023 Petunia axillaris HOM05D007141 ORTHO05D008975 6.1e-08 61.2 40 70.0
AagrBONN_evm.TU.Sc2ySwM_117.1198 Anthoceros agrestis HOM05D007141 ORTHO05D008975 1.4e-07 60.1 41 53.7
SMO361G0717 Selaginella moellendorffii HOM05D007141 ORTHO05D008975 1.8e-07 59.7 65 38.5
Atru.BG.143.p Acer truncatum HOM05D007141 ORTHO05D008975 1.2e-06 57.0 28 82.1
Atru.BG.284.p Acer truncatum HOM05D007141 ORTHO05D008975 2.6e-06 55.8 28 82.1


User provided reference genes

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