Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv12427 Davidia involucrata HOM05D000020 ORTHO05D183652 5.9e-52 207.2 102 100.0
Oeu005354.1 Olea europaea HOM05D000020 ORTHO05D001617 4.7e-09 64.7 37 73.0
CSS0016140 Camellia sinensis var. sinensis HOM05D000020 ORTHO05D001617 5.2e-08 61.2 35 77.1
Dinv17006 Davidia involucrata HOM05D000020 ORTHO05D001617 5.2e-08 61.2 35 77.1
Dinv42955 Davidia involucrata HOM05D000020 ORTHO05D001617 5.2e-08 61.2 35 77.1
Dinv43144 Davidia involucrata HOM05D000020 ORTHO05D001617 5.2e-08 61.2 35 77.1
ECA233G5264 Erigeron canadensis HOM05D000020 ORTHO05D001617 6.8e-08 60.8 36 72.2
Lj1A153T34 Lonicera japonica HOM05D000020 ORTHO05D001240 8.9e-08 60.5 41 61.0
Hma1.2p1_1542F.1_g289720 Hydrangea macrophylla HOM05D000020 ORTHO05D001617 1.5e-07 59.7 37 70.3
MBI14_g36921_MAGBIO Magnolia biondii HOM05D000020 ORTHO05D001617 2.6e-07 58.9 36 69.4
Manes.01G173700 Manihot esculenta HOM05D000020 ORTHO05D001617 2.6e-07 58.9 35 77.1
Sabra16G0144800 Salix brachista HOM05D000020 ORTHO05D001617 2.6e-07 58.9 35 71.4
vmacro10232 Vaccinium macrocarpon HOM05D000020 ORTHO05D001617 2.6e-07 58.9 36 72.2
CiPaw.13G094100 Carya illinoinensis HOM05D000020 ORTHO05D001617 3.4e-07 58.5 37 70.3
Haze_24098 Corylus avellana HOM05D000020 ORTHO05D001617 3.4e-07 58.5 35 71.4
Dinv03046 Davidia involucrata HOM05D000020 ORTHO05D001617 3.4e-07 58.5 38 65.8
Thecc.09G321200 Theobroma cacao HOM05D000020 ORTHO05D001617 3.4e-07 58.5 54 48.1
Rhsim01G0227700 Rhododendron simsii HOM05D000020 ORTHO05D001617 4.4e-07 58.2 37 64.9
Cfa011506 Carpinus fangiana HOM05D000020 ORTHO05D001617 5.8e-07 57.8 35 71.4
Lj1A937T96 Lonicera japonica HOM05D000020 ORTHO05D001240 5.8e-07 57.8 40 65.0
MBI14_g36919_MAGBIO Magnolia biondii HOM05D003688 ORTHO05D004338 5.8e-07 57.8 36 66.7
MBI14_g47391_MAGBIO Magnolia biondii HOM05D000020 ORTHO05D001617 5.8e-07 57.8 36 66.7
QL01p031894 Quercus lobata HOM05D000020 ORTHO05D001617 5.8e-07 57.8 35 68.6
QL10p047334 Quercus lobata HOM05D000020 ORTHO05D001240 5.8e-07 57.8 35 68.6
CSS0028102 Camellia sinensis var. sinensis HOM05D000020 ORTHO05D001617 7.5e-07 57.4 39 64.1
Hma1.2p1_0035F.1_g022430 Hydrangea macrophylla HOM05D000020 ORTHO05D001617 7.5e-07 57.4 35 68.6
Medtr4g083500 Medicago truncatula HOM05D000020 ORTHO05D001617 9.8e-07 57.0 49 55.1
TWI79G1008 Tripterygium wilfordii HOM05D000020 ORTHO05D001617 9.8e-07 57.0 37 70.3
Phvul.002G099500 Phaseolus vulgaris HOM05D000020 ORTHO05D001617 1.3e-06 56.6 49 55.1
Nn2g13342 Nelumbo nucifera HOM05D000020 ORTHO05D001617 1.7e-06 56.2 34 67.6
Potri.001G240000 Populus trichocarpa HOM05D000020 ORTHO05D001617 1.7e-06 56.2 36 63.9
Ca_18774_v3 Cicer arietinum L. HOM05D000020 ORTHO05D001617 2.2e-06 55.8 50 54.0
Nn2g11104 Nelumbo nucifera HOM05D000020 ORTHO05D001617 2.2e-06 55.8 35 68.6
Cpa.g.sc81.143 Carica papaya HOM05D000020 ORTHO05D001617 2.9e-06 55.5 35 68.6
Cfa001473 Carpinus fangiana HOM05D000020 ORTHO05D001617 2.9e-06 55.5 35 65.7
ClCG00G003450 Citrullus lanatus HOM05D000020 ORTHO05D001617 2.9e-06 55.5 35 65.7
ClCG07G003260 Citrullus lanatus HOM05D000020 ORTHO05D001617 2.9e-06 55.5 35 65.7
COL.COLO4_18511 Corchorus olitorius HOM05D000020 ORTHO05D001617 2.9e-06 55.5 40 57.5
Lj4C7T5 Lonicera japonica HOM05D000020 ORTHO05D010558 2.9e-06 55.5 36 66.7
PSO063G3116 Papaver somniferum HOM05D000020 ORTHO05D001617 2.9e-06 55.5 35 65.7
Duzib168G0128 Durio zibethinus HOM05D000020 ORTHO05D001617 3.7e-06 55.1 37 62.2
Eucgr.F03575 Eucalyptus grandis HOM05D000020 ORTHO05D010558 3.7e-06 55.1 43 58.1
Gohir.A13G227400 Gossypium hirsutum HOM05D000020 ORTHO05D001617 3.7e-06 55.1 36 63.9
Rhsim09G0165900 Rhododendron simsii HOM05D000020 ORTHO05D001617 3.7e-06 55.1 36 66.7
Gohir.D13G233000 Gossypium hirsutum HOM05D000020 ORTHO05D001617 4.9e-06 54.7 35 65.7
Gorai.013G263800 Gossypium raimondii HOM05D000020 ORTHO05D001617 4.9e-06 54.7 35 65.7
Lsat_1_v5_gn_8_15560 Lactuca sativa HOM05D000020 ORTHO05D001617 4.9e-06 54.7 36 63.9
Lj1C937T14 Lonicera japonica HOM05D000020 ORTHO05D001617 4.9e-06 54.7 36 61.1
MD11G1107600 Malus domestica HOM05D000020 ORTHO05D001617 4.9e-06 54.7 36 66.7
Nn1g00320 Nelumbo nucifera HOM05D000020 ORTHO05D001617 4.9e-06 54.7 36 58.3
Os04g0681950 Oryza sativa ssp. japonica HOM05D000020 ORTHO05D001617 4.9e-06 54.7 37 59.5
Sabra08G0040600 Salix brachista HOM05D000020 ORTHO05D001617 4.9e-06 54.7 35 68.6
GSVIVG01016553001 Vitis vinifera HOM05D000020 ORTHO05D001617 4.9e-06 54.7 35 65.7
Zm00001eb065810 Zea mays HOM05D000020 ORTHO05D001617 4.9e-06 54.7 36 61.1
Zm00001eb091470 Zea mays HOM05D000020 ORTHO05D001617 4.9e-06 54.7 35 68.6
Aqoxy4G02930 Aquilegia oxysepala HOM05D000020 ORTHO05D001617 6.4e-06 54.3 35 62.9
Haze_17067 Corylus avellana HOM05D000020 ORTHO05D001617 6.4e-06 54.3 35 62.9
Haze_22837 Corylus avellana HOM05D002204 ORTHO05D002875 6.4e-06 54.3 40 62.5
Dinv26016 Davidia involucrata HOM05D000020 ORTHO05D001617 6.4e-06 54.3 35 62.9
Eucgr.B02367 Eucalyptus grandis HOM05D000020 ORTHO05D001617 6.4e-06 54.3 46 56.5
Manes.07G116500 Manihot esculenta HOM05D000020 ORTHO05D001617 6.4e-06 54.3 35 65.7
Potri.008G055900 Populus trichocarpa HOM05D000020 ORTHO05D001617 6.4e-06 54.3 35 68.6
THA.LOC104810780 Tarenaya hassleriana HOM05D000020 ORTHO05D001617 6.4e-06 54.3 35 65.7
vmacro10233 Vaccinium macrocarpon HOM05D000020 ORTHO05D001617 6.4e-06 54.3 37 64.9
Cc00_g27990 Coffea canephora HOM05D000020 ORTHO05D001617 8.3e-06 53.9 37 62.2
Hma1.2p1_0612F.1_g188940 Hydrangea macrophylla HOM05D000020 ORTHO05D010558 8.3e-06 53.9 43 58.1
Nitab4.5_0010090g0010 Nicotiana tabacum HOM05D000020 ORTHO05D010558 8.3e-06 53.9 36 63.9
vmacro14516 Vaccinium macrocarpon HOM05D000020 ORTHO05D001617 8.3e-06 53.9 35 65.7


User provided reference genes

Program Settings