Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv12371 Davidia involucrata HOM05D009083 ORTHO05D011928 3.1e-200 701.8 418 100.0
Dinv08694 Davidia involucrata HOM05D009083 ORTHO05D011928 4.8e-185 651.4 434 90.6
Dinv14196 Davidia involucrata HOM05D009083 ORTHO05D005075 1.2e-183 646.7 415 94.0
Dinv24563 Davidia involucrata HOM05D009083 ORTHO05D011928 4.2e-173 611.7 538 73.2
Dinv02991 Davidia involucrata HOM05D009083 ORTHO05D011928 3.5e-167 592.0 585 67.7
Dinv32839 Davidia involucrata HOM05D009083 ORTHO05D011928 2.0e-151 539.7 431 81.4
Dinv02466 Davidia involucrata HOM05D009083 ORTHO05D011928 3.2e-144 515.8 455 78.0
Dinv22868 Davidia involucrata HOM05D009083 ORTHO05D011928 2.1e-143 513.1 375 89.1
Dinv32095 Davidia involucrata HOM05D009083 ORTHO05D011928 3.0e-142 509.2 795 49.7
Dinv12510 Davidia involucrata HOM05D009083 ORTHO05D011928 2.5e-141 506.1 489 71.6
Dinv36737 Davidia involucrata HOM05D009083 ORTHO05D011928 1.6e-140 503.4 419 75.4
Dinv08379 Davidia involucrata HOM05D009083 ORTHO05D011928 2.0e-130 469.9 505 67.9
Dinv19539 Davidia involucrata HOM05D009083 ORTHO05D011928 3.8e-129 465.7 686 52.9
Dinv06073 Davidia involucrata HOM05D009083 ORTHO05D011928 2.0e-106 390.2 429 66.2
Dinv18192 Davidia involucrata HOM05D009083 ORTHO05D011928 7.1e-104 381.7 781 43.7
Dinv06592 Davidia involucrata HOM05D009083 ORTHO05D011928 1.5e-93 347.4 246 92.3
Dinv01555 Davidia involucrata HOM05D006066 ORTHO05D007720 1.1e-91 341.3 249 87.1
Dinv09216 Davidia involucrata HOM05D009083 ORTHO05D011928 2.4e-91 340.1 515 54.2
Dinv04145 Davidia involucrata HOM05D009083 ORTHO05D011928 1.0e-89 334.7 251 92.8
Dinv06593 Davidia involucrata HOM05D009083 ORTHO05D011928 8.8e-86 321.6 170 95.9
Dinv12147 Davidia involucrata HOM05D009083 ORTHO05D011928 6.5e-57 225.7 182 94.5
Dinv20770 Davidia involucrata HOM05D009083 ORTHO05D011928 7.8e-50 202.2 136 90.4
Dinv44370 Davidia involucrata HOM05D009083 ORTHO05D011928 7.5e-45 185.7 125 81.6
Dinv18017 Davidia involucrata HOM05D009083 ORTHO05D011928 7.3e-40 169.1 96 85.4
Actinidia03255 Actinidia chinensis HOM05D009083 ORTHO05D011928 1.5e-37 161.4 210 58.1
Dinv09484 Davidia involucrata HOM05D009083 ORTHO05D011928 5.1e-25 119.8 193 71.0
Actinidia34652 Actinidia chinensis HOM05D009083 ORTHO05D011928 3.4e-21 107.1 210 36.7
MBI06_g04760_MAGBIO Magnolia biondii HOM05D008170 ORTHO05D010746 3.6e-15 87.0 136 38.2
Dinv01554 Davidia involucrata HOM05D006066 ORTHO05D007720 4.0e-14 83.6 82 59.8
Os01g0547200 Oryza sativa ssp. japonica HOM05D004258 ORTHO05D011312 1.3e-12 78.6 100 43.0
Nn6g34652 Nelumbo nucifera HOM05D000023 ORTHO05D000014 4.9e-12 76.6 134 34.3
MBI14_g28488_MAGBIO Magnolia biondii HOM05D003263 ORTHO05D011312 8.4e-12 75.9 106 34.9
Aqoxy1G00641 Aquilegia oxysepala HOM05D000023 ORTHO05D000014 1.1e-11 75.5 90 40.0
Dinv36736 Davidia involucrata HOM05D000573 ORTHO05D000425 1.1e-11 75.5 60 90.0
Dinv33581 Davidia involucrata HOM05D009083 ORTHO05D011928 3.2e-11 73.9 52 65.4
MBI19_g09384_MAGBIO Magnolia biondii HOM05D003263 ORTHO05D004801 1.2e-10 72.0 144 31.2
QL04p050699 Quercus lobata HOM05D000023 ORTHO05D000014 1.6e-10 71.6 63 49.2
Sopen10g007400 Solanum pennellii HOM05D000023 ORTHO05D000014 1.6e-10 71.6 66 48.5
SGA_v2.0_scaffold17G08089 Striga asiatica HOM05D000023 ORTHO05D000014 2.1e-10 71.2 180 30.0
TWI38G0158 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 2.1e-10 71.2 63 49.2
MBI13_g29657_MAGBIO Magnolia biondii HOM05D003263 ORTHO05D011312 2.7e-10 70.9 106 35.8
PSO339G3780 Papaver somniferum HOM05D000023 ORTHO05D000014 2.7e-10 70.9 110 35.5
Prupe.2G058600 Prunus persica HOM05D000023 ORTHO05D000014 3.5e-10 70.5 63 47.6
Sopen01g050040 Solanum pennellii HOM05D000023 ORTHO05D000014 4.6e-10 70.1 66 48.5
PSO210G1900 Papaver somniferum HOM05D000023 ORTHO05D000014 6.0e-10 69.7 72 43.1
Sopen01g010490 Solanum pennellii HOM05D000023 ORTHO05D000014 6.0e-10 69.7 107 38.3
PSO210G5463 Papaver somniferum HOM05D000023 ORTHO05D000014 7.8e-10 69.3 71 43.7
MD02G1265900 Malus domestica HOM05D000023 ORTHO05D000014 1.0e-09 68.9 111 33.3
Sopen10g005310 Solanum pennellii HOM05D000023 ORTHO05D000014 1.0e-09 68.9 111 36.0
Atru.chr12.1140 Acer truncatum HOM05D000023 ORTHO05D009195 1.7e-09 68.2 67 41.8
PSO170G4702 Papaver somniferum HOM05D000023 ORTHO05D000014 1.7e-09 68.2 76 39.5
SGA_v2.0_scaffold327G48774 Striga asiatica HOM05D000023 ORTHO05D000014 1.7e-09 68.2 79 40.5
GSVIVG01027351001 Vitis vinifera HOM05D000023 ORTHO05D000014 2.3e-09 67.8 63 44.4
Aqoxy5G01955 Aquilegia oxysepala HOM05D009083 ORTHO05D010901 3.0e-09 67.4 115 30.4
CSS0005925 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 5.1e-09 66.6 81 40.7
ClCG08G008630 Citrullus lanatus HOM05D000023 ORTHO05D000014 5.1e-09 66.6 63 46.0
MELO3C019933.2 Cucumis melo HOM05D000023 ORTHO05D000014 5.1e-09 66.6 63 46.0
CsaV3_6G004650 Cucumis sativus L. HOM05D000023 ORTHO05D000014 5.1e-09 66.6 63 46.0
FvH4_6g35011 Fragaria vesca HOM05D000023 ORTHO05D010681 5.1e-09 66.6 165 35.2
QL11p007092 Quercus lobata HOM05D000412 ORTHO05D000429 6.6e-09 66.2 72 41.7
Rhsim01G0183100 Rhododendron simsii HOM05D000023 ORTHO05D000014 8.7e-09 65.9 63 42.9
Sed0017071 Sechium edule HOM05D000023 ORTHO05D000014 8.7e-09 65.9 63 46.0
BolC2t11123H Brassica oleracea HOM05D000023 ORTHO05D000014 1.5e-08 65.1 95 35.8
MBI13_g29627_MAGBIO Magnolia biondii HOM05D003263 ORTHO05D011312 1.5e-08 65.1 106 34.9
MBI14_g11424_MAGBIO Magnolia biondii HOM05D008170 ORTHO05D010746 1.5e-08 65.1 57 47.4
MBI15_g03480_MAGBIO Magnolia biondii HOM05D003263 ORTHO05D011312 1.5e-08 65.1 127 30.7
CSS0007228 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.9e-08 64.7 63 42.9
CSS0046865 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D008955 1.9e-08 64.7 63 42.9
CiPaw.11G064600 Carya illinoinensis HOM05D000023 ORTHO05D000014 1.9e-08 64.7 138 29.0
Rhsim02G0219500 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.9e-08 64.7 153 30.7
Rhsim04G0137200 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.9e-08 64.7 153 30.7
RhsimUnG0127700 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.9e-08 64.7 153 30.7
RhsimUnG0234800 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.9e-08 64.7 153 30.7
Hund09860 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.9e-08 64.7 140 29.3
C01p28140 Brassica napus HOM05D023830 ORTHO05D009998 2.5e-08 64.3 107 32.7
C02p50440 Brassica napus HOM05D000023 ORTHO05D000014 2.5e-08 64.3 184 27.7
Hund17405 Selenicereus undatus HOM05D000023 ORTHO05D009195 2.5e-08 64.3 140 29.3
Hund04216 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.3e-08 63.9 140 28.6
Ah.09g225470 Amaranthus hybridus HOM05D008981 ORTHO05D009195 4.3e-08 63.5 156 32.7
A08p11410 Brassica napus HOM05D000023 ORTHO05D000014 7.3e-08 62.8 95 35.8
BolC6t37741H Brassica oleracea HOM05D000023 ORTHO05D000014 7.3e-08 62.8 95 35.8
BraA09t37417Z Brassica rapa HOM05D000023 ORTHO05D000014 7.3e-08 62.8 184 27.7
FvH4_6g04722 Fragaria vesca HOM05D000023 ORTHO05D010681 7.3e-08 62.8 165 33.9
Hund08340 Selenicereus undatus HOM05D000023 ORTHO05D000014 7.3e-08 62.8 140 30.0
TWI09G0787 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 7.3e-08 62.8 111 35.1
TWI38G0651 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 7.3e-08 62.8 111 35.1
TWI63G0881 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 7.3e-08 62.8 111 35.1
TWI63G1486 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 7.3e-08 62.8 111 35.1
TWI73G1202 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 7.3e-08 62.8 111 35.1
TWI81G1016 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 7.3e-08 62.8 111 35.1
Migut.N02174 Erythranthe guttata HOM05D018247 ORTHO05D009195 9.6e-08 62.4 99 31.3
Hund15541 Selenicereus undatus HOM05D000023 ORTHO05D009195 9.6e-08 62.4 116 31.9
BolC2t12125H Brassica oleracea HOM05D000023 ORTHO05D000014 1.3e-07 62.0 88 37.5
Hund01377 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.3e-07 62.0 140 27.9
SGA_v2.0_scaffold281G46900 Striga asiatica HOM05D000023 ORTHO05D000014 1.3e-07 62.0 178 27.5
Aqoxy6G01516 Aquilegia oxysepala HOM05D000537 ORTHO05D000415 1.6e-07 61.6 79 40.5
C09p10500 Brassica napus HOM05D023830 ORTHO05D009998 1.6e-07 61.6 107 31.8
HanXRQChr07g0186221 Helianthus annuus HOM05D000023 ORTHO05D000014 1.6e-07 61.6 157 29.3
BolC3t16229H Brassica oleracea HOM05D000023 ORTHO05D000014 2.1e-07 61.2 95 34.7
BolC9t57982H Brassica oleracea HOM05D000023 ORTHO05D000014 2.1e-07 61.2 79 35.4
SHI16918 Sapria himalayana HOM05D003924 ORTHO05D005216 2.1e-07 61.2 104 30.8
Ah.13g070180 Amaranthus hybridus HOM05D008981 ORTHO05D009195 2.8e-07 60.8 124 31.5
Aqoxy7G02685 Aquilegia oxysepala HOM05D000023 ORTHO05D000014 2.8e-07 60.8 157 28.7
A06p21240 Brassica napus HOM05D000554 ORTHO05D011030 2.8e-07 60.8 162 29.6
FvH4_2g12511 Fragaria vesca HOM05D000023 ORTHO05D010681 2.8e-07 60.8 160 32.5
Rhsim05G0096600 Rhododendron simsii HOM05D000023 ORTHO05D000014 2.8e-07 60.8 124 31.5
Aqoxy1G00882 Aquilegia oxysepala HOM05D000023 ORTHO05D011312 3.6e-07 60.5 66 43.9
Aqoxy4G01515 Aquilegia oxysepala HOM05D009083 ORTHO05D011312 3.6e-07 60.5 117 32.5
FvH4_2g02251 Fragaria vesca HOM05D000023 ORTHO05D010681 3.6e-07 60.5 160 32.5
Rhsim02G0038300 Rhododendron simsii HOM05D000023 ORTHO05D000014 3.6e-07 60.5 153 30.1
Sed0008376 Sechium edule HOM05D000023 ORTHO05D000014 3.6e-07 60.5 75 40.0
MSTRG.23368 Avicennia marina HOM05D000023 ORTHO05D000014 4.8e-07 60.1 88 38.6
CiPaw.13G061100 Carya illinoinensis HOM05D000023 ORTHO05D000014 4.8e-07 60.1 141 30.5
Cc02_g07690 Coffea canephora HOM05D000537 ORTHO05D000415 4.8e-07 60.1 107 30.8
Hund19738 Selenicereus undatus HOM05D000023 ORTHO05D003407 4.8e-07 60.1 136 29.4
CSS0049915 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 6.2e-07 59.7 76 38.2
CiPaw.13G120100 Carya illinoinensis HOM05D000023 ORTHO05D000014 6.2e-07 59.7 92 32.6
BcaC08g44948 Brassica carinata HOM05D000023 ORTHO05D000014 8.1e-07 59.3 183 27.3
A01p38030 Brassica napus HOM05D000023 ORTHO05D000014 8.1e-07 59.3 162 29.0
C06p25790 Brassica napus HOM05D000023 ORTHO05D000014 8.1e-07 59.3 183 27.3
BolC8t49429H Brassica oleracea HOM05D000023 ORTHO05D000014 8.1e-07 59.3 106 36.8
BraA04t16574Z Brassica rapa HOM05D023830 ORTHO05D009998 8.1e-07 59.3 106 31.1
CiPaw.07G170200 Carya illinoinensis HOM05D000023 ORTHO05D000014 8.1e-07 59.3 92 32.6
FvH4_1g14882 Fragaria vesca HOM05D000023 ORTHO05D010681 8.1e-07 59.3 160 31.9
Hund00853 Selenicereus undatus HOM05D000023 ORTHO05D000014 8.1e-07 59.3 149 28.2
Hund30017 Selenicereus undatus HOM05D000023 ORTHO05D000014 8.1e-07 59.3 140 28.6
Nn2g14207 Nelumbo nucifera HOM05D048985 ORTHO05D010901 1.1e-06 58.9 81 32.1
Rhsim03G0114200 Rhododendron simsii HOM05D008981 ORTHO05D009195 1.1e-06 58.9 155 29.7
Hund11026 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.1e-06 58.9 74 41.9
CiPaw.01G093600 Carya illinoinensis HOM05D000023 ORTHO05D000014 1.4e-06 58.5 92 32.6
Sabra06G0015200 Salix brachista HOM05D000023 ORTHO05D000014 1.4e-06 58.5 85 37.6
Zm00001eb252520 Zea mays HOM05D004043 ORTHO05D002193 1.4e-06 58.5 84 40.5
CiPaw.03G191500 Carya illinoinensis HOM05D000023 ORTHO05D000014 1.8e-06 58.2 92 32.6
CiPaw.15G074600 Carya illinoinensis HOM05D000023 ORTHO05D000014 1.8e-06 58.2 141 29.1
SHI24476 Sapria himalayana HOM05D000023 ORTHO05D000014 1.8e-06 58.2 90 32.2
Aqoxy7G01711 Aquilegia oxysepala HOM05D000023 ORTHO05D000014 2.4e-06 57.8 157 28.0
Hma1.2p1_0490F.1_g164210 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.4e-06 57.8 123 35.8
CiPaw.05G046600 Carya illinoinensis HOM05D000023 ORTHO05D000014 3.1e-06 57.4 92 32.6
Hma1.2p1_2905F.1_g330090 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 3.1e-06 57.4 110 31.8
Hund04838 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.1e-06 57.4 74 41.9
Hund10078 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.1e-06 57.4 140 26.4
Hund22679 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.1e-06 57.4 142 27.5
BraA01t03749Z Brassica rapa HOM05D000023 ORTHO05D000014 4.0e-06 57.0 101 32.7
Hund23015 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.0e-06 57.0 111 31.5
THA.LOC104820419 Tarenaya hassleriana HOM05D000023 ORTHO05D000014 4.0e-06 57.0 63 41.3
TPR.G33254 Trifolium pratense HOM05D008981 ORTHO05D009195 4.0e-06 57.0 126 27.0
A01p36900 Brassica napus HOM05D000023 ORTHO05D000014 5.3e-06 56.6 101 32.7
Hma1.2p1_0754F.1_g213020 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 5.3e-06 56.6 110 31.8
Hma1.2p1_0793F.1_g218611 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 5.3e-06 56.6 110 31.8
arahy.Tifrunner.gnm1.ann1.0D33HZ Arachis hypogaea HOM05D000023 ORTHO05D002750 6.9e-06 56.2 59 44.1
arahy.Tifrunner.gnm1.ann1.CB97FM Arachis hypogaea HOM05D000023 ORTHO05D000014 6.9e-06 56.2 59 44.1
arahy.Tifrunner.gnm1.ann1.EKH796 Arachis hypogaea HOM05D000023 ORTHO05D000014 6.9e-06 56.2 59 44.1
arahy.Tifrunner.gnm1.ann1.M9HV3F Arachis hypogaea HOM05D000023 ORTHO05D000014 6.9e-06 56.2 59 44.1
arahy.Tifrunner.gnm1.ann1.VS78B6 Arachis hypogaea HOM05D000023 ORTHO05D000014 9.0e-06 55.8 59 42.4
arahy.Tifrunner.gnm1.ann1.YCYQ9Q Arachis hypogaea HOM05D000023 ORTHO05D000014 9.0e-06 55.8 59 44.1
C09p51190 Brassica napus HOM05D000023 ORTHO05D000014 9.0e-06 55.8 78 34.6
AUR62012127 Chenopodium quinoa HOM05D000023 ORTHO05D000014 9.0e-06 55.8 74 37.8
AUR62040709 Chenopodium quinoa HOM05D000023 ORTHO05D000014 9.0e-06 55.8 75 33.3
Lj1g0007652 Lotus japonicus HOM05D000023 ORTHO05D000014 9.0e-06 55.8 103 32.0
MBI19_g40192_MAGBIO Magnolia biondii HOM05D009083 ORTHO05D011312 9.0e-06 55.8 88 36.4
TWI18G0310 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 9.0e-06 55.8 111 33.3


User provided reference genes

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