Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv12270 Davidia involucrata HOM05D005957 ORTHO05D007318 3.4e-58 228.0 108 100.0
Dinv04837 Davidia involucrata HOM05D005957 ORTHO05D007318 1.5e-45 186.0 87 100.0
Dinv28722 Davidia involucrata HOM05D005957 ORTHO05D007318 3.4e-34 148.3 87 80.5
Peaxi162Scf01692g00003 Petunia axillaris HOM05D005957 ORTHO05D007318 1.2e-31 139.8 87 75.9
Nitab4.5_0007927g0010 Nicotiana tabacum HOM05D005957 ORTHO05D007318 2.1e-31 139.0 87 75.9
Hma1.2p1_0119F.1_g056870 Hydrangea macrophylla HOM05D005957 ORTHO05D007318 6.1e-31 137.5 86 73.3
CSS0038993 Camellia sinensis var. sinensis HOM05D005957 ORTHO05D007318 3.0e-30 135.2 86 72.1
Nitab4.5_0000002g0080 Nicotiana tabacum HOM05D005957 ORTHO05D007318 3.9e-30 134.8 87 73.6
Oeu064677.1 Olea europaea HOM05D005957 ORTHO05D007318 3.3e-29 131.7 87 70.1
Duzib168G0649 Durio zibethinus HOM05D005957 ORTHO05D007318 2.2e-28 129.0 87 67.8
Solyc06g082450.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 2.2e-28 129.0 87 71.3
Sopen06g033830 Solanum pennellii HOM05D005957 ORTHO05D007318 4.8e-28 127.9 87 70.1
Nitab4.5_0002091g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 6.3e-28 127.5 87 66.7
Peaxi162Scf00390g00049 Petunia axillaris HOM05D005957 ORTHO05D007318 2.4e-27 125.6 88 69.3
PGSC0003DMG400046061 Solanum tuberosum HOM05D005957 ORTHO05D007318 4.1e-27 124.8 88 70.5
RcHm_v2.0_Chr5g0072641 Rosa chinensis HOM05D005957 ORTHO05D007318 2.6e-26 122.1 85 68.2
Solyc01g090870.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 2.6e-26 122.1 88 68.2
Sopen01g036610 Solanum pennellii HOM05D005957 ORTHO05D007318 2.6e-26 122.1 88 68.2
MSTRG.17909 Avicennia marina HOM05D005957 ORTHO05D007318 4.5e-26 121.3 86 64.0
Cc01_g15210 Coffea canephora HOM05D005957 ORTHO05D007318 7.7e-26 120.6 87 64.4
Thecc.09G362300 Theobroma cacao HOM05D005957 ORTHO05D007318 7.7e-26 120.6 86 67.4
GSVIVG01024580001 Vitis vinifera HOM05D005957 ORTHO05D007318 7.7e-26 120.6 86 65.1
Lsat_1_v5_gn_0_40840 Lactuca sativa HOM05D005957 ORTHO05D007318 1.0e-25 120.2 88 63.6
Haze_24453 Corylus avellana HOM05D005957 ORTHO05D007318 1.3e-25 119.8 86 67.4
FvH4_3g40300 Fragaria vesca HOM05D005957 ORTHO05D007318 2.2e-25 119.0 85 65.9
FAN11G2330 Fragaria x ananassa HOM05D005957 ORTHO05D007318 2.2e-25 119.0 85 65.9
FAN16G3236 Fragaria x ananassa HOM05D005957 ORTHO05D007318 2.2e-25 119.0 85 65.9
FAN21G1009 Fragaria x ananassa HOM05D005957 ORTHO05D007318 2.2e-25 119.0 85 65.9
TAR623G0423 Trochodendron aralioides HOM05D005957 ORTHO05D007318 2.2e-25 119.0 86 66.3
CAN.G1872.4 Capsicum annuum HOM05D005957 ORTHO05D007318 2.9e-25 118.6 89 68.5
FAN25G1085 Fragaria x ananassa HOM05D005957 ORTHO05D007318 3.8e-25 118.2 85 65.9
Rhsim13G0060900 Rhododendron simsii HOM05D005957 ORTHO05D007318 5.0e-25 117.9 87 67.8
Ah.08g217120 Amaranthus hybridus HOM05D005957 ORTHO05D007318 6.5e-25 117.5 81 65.4
Cfa011817 Carpinus fangiana HOM05D005957 ORTHO05D007318 3.2e-24 115.2 86 65.1
Sabra13G0125100 Salix brachista HOM05D005957 ORTHO05D007318 4.2e-24 114.8 86 60.5
Cpa.g.sc2.317 Carica papaya HOM05D005957 ORTHO05D007318 9.4e-24 113.6 87 62.1
TWI79G1455 Tripterygium wilfordii HOM05D005957 ORTHO05D007318 9.4e-24 113.6 87 62.1
COL.COLO4_11196 Corchorus olitorius HOM05D005957 ORTHO05D007318 1.6e-23 112.8 87 63.2
ECA236G1285 Erigeron canadensis HOM05D005957 ORTHO05D007318 1.6e-23 112.8 90 61.1
Potri.013G155300 Populus trichocarpa HOM05D005957 ORTHO05D007318 2.1e-23 112.5 86 60.5
Sabra19G0126000 Salix brachista HOM05D005957 ORTHO05D007318 2.7e-23 112.1 86 61.6
vmacro02888 Vaccinium macrocarpon HOM05D005957 ORTHO05D007318 3.6e-23 111.7 85 63.5
Potri.019G128400 Populus trichocarpa HOM05D005957 ORTHO05D007318 4.7e-23 111.3 86 61.6
CANSAT54G0691 Cannabis sativa HOM05D005957 ORTHO05D007318 7.9e-23 110.5 89 59.6
Ah.15g095100 Amaranthus hybridus HOM05D005957 ORTHO05D007318 1.0e-22 110.2 81 60.5
EL10Ac7g16454 Beta vulgaris HOM05D005957 ORTHO05D007318 1.4e-22 109.8 81 59.3
QL01p025125 Quercus lobata HOM05D005957 ORTHO05D007318 1.4e-22 109.8 86 59.3
Atru.chr1.2524 Acer truncatum HOM05D005957 ORTHO05D007318 1.8e-22 109.4 91 60.4
CiPaw.14G051700 Carya illinoinensis HOM05D005957 ORTHO05D007318 2.3e-22 109.0 80 65.0
LjContig00141g0008224 Lotus japonicus HOM05D005957 ORTHO05D007318 2.3e-22 109.0 73 72.6
SGA_v2.0_scaffold77G25368 Striga asiatica HOM05D005957 ORTHO05D007318 2.3e-22 109.0 86 60.5
Psat2g052120 Pisum sativum HOM05D005957 ORTHO05D007318 3.0e-22 108.6 90 65.6
Migut.N00743 Erythranthe guttata HOM05D005957 ORTHO05D007318 3.9e-22 108.2 92 57.6
Glyma.02G235500 Glycine max HOM05D005957 ORTHO05D007318 8.8e-22 107.1 82 64.6
Glyma.14G203500 Glycine max HOM05D005957 ORTHO05D007318 1.5e-21 106.3 82 63.4
HanXRQChr01g0028631 Helianthus annuus HOM05D005957 ORTHO05D007318 1.5e-21 106.3 88 58.0
Manes.18G139500 Manihot esculenta HOM05D005957 ORTHO05D007318 1.5e-21 106.3 72 70.8
Ca_05700_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 2.6e-21 105.5 91 61.5
Ca_30026_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 2.6e-21 105.5 91 61.5
VMungo0647G0754 Vigna mungo HOM05D005957 ORTHO05D007318 2.6e-21 105.5 82 63.4
MD11G1055300 Malus domestica HOM05D005957 ORTHO05D007318 3.3e-21 105.1 88 59.1
Phvul.008G248400 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 3.3e-21 105.1 82 62.2
Medtr5g075190 Medicago truncatula HOM05D005957 ORTHO05D007318 9.7e-21 103.6 89 62.9
TPR.G25771 Trifolium pratense HOM05D005957 ORTHO05D007318 1.3e-20 103.2 88 63.6
Prupe.6G042800 Prunus persica HOM05D005957 ORTHO05D007318 2.2e-20 102.4 86 59.3
Aqoxy2G00718 Aquilegia oxysepala HOM05D005957 ORTHO05D007318 2.8e-20 102.1 86 57.0
HanXRQChr17g0565391 Helianthus annuus HOM05D005957 ORTHO05D007318 2.8e-20 102.1 88 55.7
SalBow6G3501 Salvia bowleyana HOM05D005957 ORTHO05D007318 2.8e-20 102.1 86 60.5
CiPaw.13G065100 Carya illinoinensis HOM05D005957 ORTHO05D007318 3.7e-20 101.7 72 63.9
Migut.D00827 Erythranthe guttata HOM05D005957 ORTHO05D007318 4.8e-20 101.3 87 58.6
Nitab4.5_0002759g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 1.1e-19 100.1 87 57.5
PSO017G7297 Papaver somniferum HOM05D005957 ORTHO05D007318 1.8e-19 99.4 75 64.0
Ciclev10003853m.g Citrus clementina HOM05D005957 ORTHO05D007318 2.4e-19 99.0 72 65.3
Oeu011373.1 Olea europaea HOM05D005957 ORTHO05D007318 2.4e-19 99.0 87 57.5
PSO170G5428 Papaver somniferum HOM05D005957 ORTHO05D007318 9.1e-19 97.1 75 62.7
AUR62007156 Chenopodium quinoa HOM05D003140 ORTHO05D003851 1.2e-18 96.7 89 55.1
ClCG02G019100 Citrullus lanatus HOM05D005957 ORTHO05D007318 1.2e-18 96.7 75 61.3
Gohir.D05G134050 Gossypium hirsutum HOM05D005957 ORTHO05D007318 1.2e-18 96.7 91 57.1
MELO3C026874.2 Cucumis melo HOM05D005957 ORTHO05D007318 1.5e-18 96.3 75 60.0
MD03G1053700 Malus domestica HOM05D005957 ORTHO05D007318 1.5e-18 96.3 88 56.8
Gorai.009G137600 Gossypium raimondii HOM05D005957 ORTHO05D007318 2.6e-18 95.5 91 56.0
MBI03_g02190_MAGBIO Magnolia biondii HOM05D005957 ORTHO05D007318 2.6e-18 95.5 87 54.0
Eucgr.J01842 Eucalyptus grandis HOM05D005957 ORTHO05D007318 5.9e-18 94.4 89 55.1
Sed0019639 Sechium edule HOM05D005957 ORTHO05D007318 7.7e-18 94.0 87 52.9
Gohir.A05G129400 Gossypium hirsutum HOM05D005957 ORTHO05D007318 1.0e-17 93.6 91 56.0
CsaV3_6G019090 Cucumis sativus L. HOM05D005957 ORTHO05D007318 1.3e-17 93.2 91 50.5
Sc21g0004870 Simmondsia chinensis HOM05D005957 ORTHO05D007318 2.9e-17 92.0 87 55.2
Lalb_Chr17g0345591 Lupinus albus HOM05D005957 ORTHO05D007318 3.8e-17 91.7 71 63.4
PGR119G2032 Punica granatum HOM05D005957 ORTHO05D007318 6.5e-17 90.9 88 54.5
ATR0681G143 Amborella trichopoda HOM05D005957 ORTHO05D007318 8.5e-17 90.5 88 50.0
Nn5g26879 Nelumbo nucifera HOM05D005957 ORTHO05D007318 8.5e-17 90.5 88 56.8
Phvul.006G076900 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 1.4e-16 89.7 87 51.7
THA.LOC104800785 Tarenaya hassleriana HOM05D005957 ORTHO05D007318 1.4e-16 89.7 75 57.3
Aa31LG5G6330 Aethionema arabicum HOM05D005957 ORTHO05D007318 4.2e-16 88.2 77 54.5
AL4G25260 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 7.2e-16 87.4 76 52.6
AT2G30395 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 2.7e-15 85.5 79 51.9
Carub.0004s1155 Capsella rubella HOM05D005957 ORTHO05D007318 4.7e-15 84.7 74 54.1
CARHR123750 Cardamine hirsuta HOM05D005957 ORTHO05D007318 4.7e-15 84.7 74 54.1
DCAR_023195 Daucus carota HOM05D005957 ORTHO05D007318 1.0e-14 83.6 46 76.1
Carub.0001s0622 Capsella rubella HOM05D005957 ORTHO05D007318 2.3e-14 82.4 69 50.7
Sp4g12950 Schrenkiella parvula HOM05D005957 ORTHO05D007318 2.3e-14 82.4 79 53.2
Thhalv10017867m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 5.2e-14 81.3 79 51.9
BcaC02g11133 Brassica carinata HOM05D005957 ORTHO05D007318 8.8e-14 80.5 77 51.9
Os07g0679100 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 8.8e-14 80.5 88 48.9
BcaB06g28364 Brassica carinata HOM05D005957 ORTHO05D007318 1.1e-13 80.1 74 45.9
BcaB02g10322 Brassica carinata HOM05D005957 ORTHO05D007318 2.0e-13 79.3 79 51.9
BolC4t23551H Brassica oleracea HOM05D005957 ORTHO05D007318 2.0e-13 79.3 77 50.6
A05p15090 Brassica napus HOM05D005957 ORTHO05D007318 2.6e-13 79.0 79 51.9
C04p20120 Brassica napus HOM05D005957 ORTHO05D007318 2.6e-13 79.0 77 50.6
BcaC02g08022 Brassica carinata HOM05D005957 ORTHO05D007318 3.3e-13 78.6 74 48.6
A04p23170 Brassica napus HOM05D005957 ORTHO05D007318 3.3e-13 78.6 74 48.6
C04p59320 Brassica napus HOM05D005957 ORTHO05D007318 3.3e-13 78.6 74 48.6
BolC4t27440H Brassica oleracea HOM05D005957 ORTHO05D007318 3.3e-13 78.6 74 48.6
AT1G06923 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 5.7e-13 77.8 77 49.4
AL1G16950 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 1.3e-12 76.6 77 49.4
BraA04t17844Z Brassica rapa HOM05D005957 ORTHO05D007318 1.3e-12 76.6 74 47.3
BraA05t20430Z Brassica rapa HOM05D005957 ORTHO05D007318 1.7e-12 76.3 77 49.4
Thhalv10009633m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 1.7e-12 76.3 58 58.6
Thhalv10017852m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 2.2e-12 75.9 79 51.9
CARHR006600 Cardamine hirsuta HOM05D005957 ORTHO05D007318 2.8e-12 75.5 70 51.4
Zm00001eb350230 Zea mays HOM05D005957 ORTHO05D007318 3.1e-11 72.0 85 44.7
Sp1g05630 Schrenkiella parvula HOM05D005957 ORTHO05D007318 1.2e-10 70.1 58 53.4
Zm00001eb330630 Zea mays HOM05D005957 ORTHO05D007318 5.0e-09 64.7 50 58.0
Os05g0328300 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 6.5e-09 64.3 45 60.0
BcaC07g42550 Brassica carinata HOM05D005957 ORTHO05D007318 1.9e-08 62.8 55 45.5
A09p66670 Brassica napus HOM05D005957 ORTHO05D007318 4.2e-08 61.6 55 45.5
BraA09t42007Z Brassica rapa HOM05D005957 ORTHO05D007318 4.2e-08 61.6 55 45.5
BcaC07g42036 Brassica carinata HOM05D005957 ORTHO05D007318 2.7e-07 58.9 55 43.6
BcaC07g42037 Brassica carinata HOM05D005957 ORTHO05D007318 2.7e-07 58.9 55 43.6
C08p50900 Brassica napus HOM05D005957 ORTHO05D007318 2.7e-07 58.9 55 43.6
BolC8t52618H Brassica oleracea HOM05D005957 ORTHO05D007318 2.7e-07 58.9 55 43.6


User provided reference genes

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