Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv12261 Davidia involucrata HOM05D005781 ORTHO05D006835 3.0e-50 201.4 96 100.0
Rhsim06G0009100 Rhododendron simsii HOM05D005781 ORTHO05D006835 3.4e-41 171.4 97 83.5
Rhsim13G0061400 Rhododendron simsii HOM05D005781 ORTHO05D006835 6.3e-40 167.2 97 81.4
Manes.02G161400 Manihot esculenta HOM05D005781 ORTHO05D006835 8.6e-37 156.8 98 75.5
Cfa015971 Carpinus fangiana HOM05D005781 ORTHO05D006835 1.1e-36 156.4 94 75.5
PGR031G1812 Punica granatum HOM05D005781 ORTHO05D006835 1.5e-36 156.0 96 75.0
Thecc.01G232600 Theobroma cacao HOM05D005781 ORTHO05D006835 1.5e-36 156.0 98 74.5
Manes.01G244300 Manihot esculenta HOM05D005781 ORTHO05D006835 1.9e-36 155.6 98 75.5
Atru.chr1.3778 Acer truncatum HOM05D005781 ORTHO05D006835 3.3e-36 154.8 98 75.5
Dinv36923 Davidia involucrata HOM05D005781 ORTHO05D006835 9.5e-36 153.3 84 81.0
Nn8g40131 Nelumbo nucifera HOM05D005781 ORTHO05D006835 9.5e-36 153.3 96 74.0
Cc05_g05310 Coffea canephora HOM05D005781 ORTHO05D006835 1.6e-35 152.5 96 71.9
COL.COLO4_33816 Corchorus olitorius HOM05D005781 ORTHO05D006835 2.1e-35 152.1 98 72.4
CANSAT54G0055 Cannabis sativa HOM05D005781 ORTHO05D006835 2.8e-35 151.8 96 70.8
Duzib138G0305 Durio zibethinus HOM05D005781 ORTHO05D006835 2.8e-35 151.8 98 73.5
CiPaw.06G025900 Carya illinoinensis HOM05D005781 ORTHO05D006835 3.6e-35 151.4 96 72.9
COL.COLO4_20773 Corchorus olitorius HOM05D005781 ORTHO05D006835 4.7e-35 151.0 98 72.4
Nn6g33491 Nelumbo nucifera HOM05D005781 ORTHO05D006835 8.0e-35 150.2 96 74.0
CSS0033648 Camellia sinensis var. sinensis HOM05D005781 ORTHO05D006835 1.4e-34 149.4 84 81.0
Ciclev10023034m.g Citrus clementina HOM05D005781 ORTHO05D006835 1.4e-34 149.4 98 74.5
Gohir.A08G193000 Gossypium hirsutum HOM05D005781 ORTHO05D006835 1.4e-34 149.4 98 70.4
Oeu052918.1 Olea europaea HOM05D005781 ORTHO05D006835 1.8e-34 149.1 96 76.0
Gohir.D07G208300 Gossypium hirsutum HOM05D005781 ORTHO05D006835 2.3e-34 148.7 98 72.4
Hma1.2p1_0841F.1_g227020 Hydrangea macrophylla HOM05D005781 ORTHO05D006835 2.3e-34 148.7 85 84.7
Gohir.A07G202100 Gossypium hirsutum HOM05D005781 ORTHO05D006835 6.8e-34 147.1 98 70.4
CSS0000543 Camellia sinensis var. sinensis HOM05D005781 ORTHO05D006835 8.9e-34 146.7 84 79.8
Gohir.D08G211000 Gossypium hirsutum HOM05D005781 ORTHO05D006835 8.9e-34 146.7 98 69.4
Gorai.004G223700 Gossypium raimondii HOM05D005781 ORTHO05D006835 8.9e-34 146.7 98 69.4
Potri.001G082000 Populus trichocarpa HOM05D005781 ORTHO05D006835 1.2e-33 146.4 98 70.4
vmacro02893 Vaccinium macrocarpon HOM05D005781 ORTHO05D006835 1.2e-33 146.4 95 72.6
Gorai.001G235000 Gossypium raimondii HOM05D005781 ORTHO05D006835 1.5e-33 146.0 98 70.4
Prupe.6G320800 Prunus persica HOM05D005781 ORTHO05D006835 2.6e-33 145.2 96 67.7
Sopen07g026470 Solanum pennellii HOM05D005781 ORTHO05D006835 3.4e-33 144.8 96 70.8
THA.LOC104825391 Tarenaya hassleriana HOM05D005781 ORTHO05D006835 3.4e-33 144.8 98 68.4
TWI63G1301 Tripterygium wilfordii HOM05D005781 ORTHO05D006835 3.4e-33 144.8 98 70.4
Eucgr.D02385 Eucalyptus grandis HOM05D005781 ORTHO05D006835 4.4e-33 144.4 97 69.1
MD04G1200700 Malus domestica HOM05D005781 ORTHO05D006835 4.4e-33 144.4 95 66.3
Os01g0258600 Oryza sativa ssp. japonica HOM05D005781 ORTHO05D006835 7.5e-33 143.7 96 68.8
Sed0027756 Sechium edule HOM05D005781 ORTHO05D006835 9.8e-33 143.3 93 69.9
MD12G1213200 Malus domestica HOM05D005781 ORTHO05D006835 1.7e-32 142.5 95 64.2
Sed0023332 Sechium edule HOM05D005781 ORTHO05D006835 1.7e-32 142.5 93 68.8
DCAR_003312 Daucus carota HOM05D005781 ORTHO05D006835 2.2e-32 142.1 97 71.1
Hund27185 Selenicereus undatus HOM05D005781 ORTHO05D006835 2.9e-32 141.7 100 70.0
TWI38G0894 Tripterygium wilfordii HOM05D005781 ORTHO05D006835 4.9e-32 141.0 98 69.4
EL10Ac7g17336 Beta vulgaris HOM05D005781 ORTHO05D006835 8.3e-32 140.2 99 69.7
Zm00001eb109340 Zea mays HOM05D005781 ORTHO05D006835 8.3e-32 140.2 96 67.7
ClCG05G000700 Citrullus lanatus HOM05D005781 ORTHO05D006835 1.9e-31 139.0 93 68.8
MBI09_g43998_MAGBIO Magnolia biondii HOM05D005781 ORTHO05D006835 5.4e-31 137.5 95 67.4
PGSC0003DMG400026192 Solanum tuberosum HOM05D005781 ORTHO05D006835 5.4e-31 137.5 96 66.7
Lalb_Chr13g0300501 Lupinus albus HOM05D005781 ORTHO05D006835 9.2e-31 136.7 96 65.6
Lj3g0001466 Lotus japonicus HOM05D005781 ORTHO05D006835 1.2e-30 136.3 96 64.6
DCAR_022248 Daucus carota HOM05D005781 ORTHO05D006835 2.0e-30 135.6 97 67.0
Aqoxy5G00270 Aquilegia oxysepala HOM05D005781 ORTHO05D006835 2.7e-30 135.2 95 64.2
QL04p074672 Quercus lobata HOM05D005781 ORTHO05D006835 2.7e-30 135.2 84 73.8
Haze_00504 Corylus avellana HOM05D005781 ORTHO05D006835 6.0e-30 134.0 84 73.8
Atru.chr5.698 Acer truncatum HOM05D005781 ORTHO05D006835 7.8e-30 133.7 95 67.4
Ah.04g154640 Amaranthus hybridus HOM05D005781 ORTHO05D006835 7.8e-30 133.7 100 65.0
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 7.8e-30 133.7 96 63.5
RcHm_v2.0_Chr3g0455721 Rosa chinensis HOM05D005781 ORTHO05D006835 7.8e-30 133.7 96 63.5
Sc01g0002510 Simmondsia chinensis HOM05D005781 ORTHO05D006835 7.8e-30 133.7 97 63.9
Lj4g0019743 Lotus japonicus HOM05D005781 ORTHO05D006835 1.0e-29 133.3 96 64.6
vmacro12515 Vaccinium macrocarpon HOM05D005781 ORTHO05D006835 1.0e-29 133.3 86 72.1
Cpa.g.c32851 Carica papaya HOM05D005781 ORTHO05D006835 1.3e-29 132.9 86 75.6
Migut.H01206 Erythranthe guttata HOM05D005781 ORTHO05D006835 1.3e-29 132.9 97 68.0
Cfa011814 Carpinus fangiana HOM05D005781 ORTHO05D006835 2.3e-29 132.1 96 66.7
CDE02G0151 Ceratophyllum demersum HOM05D005781 ORTHO05D006835 2.3e-29 132.1 96 64.6
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 2.3e-29 132.1 96 62.5
FAN09G0731 Fragaria x ananassa HOM05D005781 ORTHO05D006835 2.3e-29 132.1 96 62.5
Glyma.08G084500 Glycine max HOM05D005781 ORTHO05D006835 2.3e-29 132.1 96 64.6
arahy.Tifrunner.gnm1.ann1.EVJW84 Arachis hypogaea HOM05D005781 ORTHO05D006835 3.9e-29 131.3 96 65.6
Glyma.05G129800 Glycine max HOM05D005781 ORTHO05D006835 3.9e-29 131.3 96 63.5
Lj4g0026259 Lotus japonicus HOM05D005781 ORTHO05D006835 3.9e-29 131.3 96 63.5
Oeu034339.1 Olea europaea HOM05D005781 ORTHO05D006835 3.9e-29 131.3 96 69.8
Ca_21653_v3 Cicer arietinum L. HOM05D005781 ORTHO05D006835 8.6e-29 130.2 96 62.5
ECA247G2075 Erigeron canadensis HOM05D005781 ORTHO05D006835 1.5e-28 129.4 97 66.0
Peaxi162Scf00007g01414 Petunia axillaris HOM05D005781 ORTHO05D006835 5.6e-28 127.5 84 69.0
CsaV3_3G007920 Cucumis sativus L. HOM05D005781 ORTHO05D006835 7.3e-28 127.1 105 59.0
Nitab4.5_0001134g0180 Nicotiana tabacum HOM05D005781 ORTHO05D006835 7.3e-28 127.1 92 63.0
Nitab4.5_0003429g0070 Nicotiana tabacum HOM05D005781 ORTHO05D006835 1.2e-27 126.3 87 65.5
Psat4g033600 Pisum sativum HOM05D005781 ORTHO05D006835 8.0e-27 123.6 96 58.3
Rhsim06G0009300 Rhododendron simsii HOM05D005781 ORTHO05D006835 8.0e-27 123.6 73 80.8
unitig_0.g2200 Utricularia gibba HOM05D005781 ORTHO05D006835 8.0e-27 123.6 91 64.8
Lsat_1_v5_gn_9_14361 Lactuca sativa HOM05D005781 ORTHO05D006835 1.1e-26 123.2 98 66.3
Nitab4.5_0008807g0010 Nicotiana tabacum HOM05D005781 ORTHO05D006835 1.4e-26 122.9 84 66.7
Medtr4g115740 Medicago truncatula HOM05D005781 ORTHO05D006835 2.3e-26 122.1 96 59.4
MELO3C006010.2 Cucumis melo HOM05D005781 ORTHO05D006835 3.1e-26 121.7 105 56.2
Os06g0184100 Oryza sativa ssp. japonica HOM05D005781 ORTHO05D006835 3.1e-26 121.7 85 69.4
Phvul.002G194100 Phaseolus vulgaris HOM05D005781 ORTHO05D006835 6.8e-26 120.6 96 57.3
Gohir.D05G278050 Gossypium hirsutum HOM05D005781 ORTHO05D006835 8.9e-26 120.2 86 64.0
Gorai.009G291400 Gossypium raimondii HOM05D005781 ORTHO05D006835 8.9e-26 120.2 86 64.0
Sabra01G0058900 Salix brachista HOM05D005781 ORTHO05D006835 1.2e-25 119.8 86 66.3
Solyc07g052913.1 Solanum lycopersicum HOM05D005781 ORTHO05D006835 4.4e-25 117.9 86 64.0
THA.LOC104825885 Tarenaya hassleriana HOM05D005781 ORTHO05D006835 1.3e-24 116.3 86 62.8
arahy.Tifrunner.gnm1.ann1.V38LZ0 Arachis hypogaea HOM05D005781 ORTHO05D006835 1.1e-23 113.2 132 47.7
Haze_11591 Corylus avellana HOM05D005781 ORTHO05D006835 2.4e-23 112.1 73 69.9
Thhalv10015111m.g Eutrema salsugineum HOM05D005781 ORTHO05D006835 2.4e-23 112.1 100 54.0
Thhalv10022933m.g Eutrema salsugineum HOM05D005781 ORTHO05D006835 7.1e-23 110.5 100 55.0
RcHm_v2.0_Chr1g0322091 Rosa chinensis HOM05D005781 ORTHO05D006835 1.2e-22 109.8 82 61.0
Atru.chr1.3777 Acer truncatum HOM05D005781 ORTHO05D006835 1.6e-22 109.4 96 64.6
BcaB07g31735 Brassica carinata HOM05D005781 ORTHO05D006835 3.5e-22 108.2 99 51.5
Sp6g27160 Schrenkiella parvula HOM05D005781 ORTHO05D006835 7.8e-22 107.1 101 56.4
Actinidia11611 Actinidia chinensis HOM05D005781 ORTHO05D006835 1.7e-21 105.9 78 69.2
Zm00001eb374690 Zea mays HOM05D005781 ORTHO05D006835 3.0e-21 105.1 66 68.2
A03p08090 Brassica napus HOM05D005781 ORTHO05D006835 6.6e-21 104.0 105 51.4
BolC3t13430H Brassica oleracea HOM05D005781 ORTHO05D006835 6.6e-21 104.0 105 50.5
Gohir.A05G276166 Gossypium hirsutum HOM05D005781 ORTHO05D006835 1.1e-20 103.2 86 57.0
BcaB01g04964 Brassica carinata HOM05D005781 ORTHO05D006835 1.5e-20 102.8 102 52.0
SalBow1G0716 Salvia bowleyana HOM05D005781 ORTHO05D006835 1.5e-20 102.8 96 56.2
AT5G16950 Arabidopsis thaliana HOM05D005781 ORTHO05D006835 2.5e-20 102.1 100 49.0
CARHR196210 Cardamine hirsuta HOM05D005781 ORTHO05D006835 7.3e-20 100.5 102 50.0
TPR.G40143 Trifolium pratense HOM05D005781 ORTHO05D006835 7.3e-20 100.5 84 54.8
Aa31LG11G12650 Aethionema arabicum HOM05D005781 ORTHO05D006835 9.5e-20 100.1 105 52.4
BraA03t10134Z Brassica rapa HOM05D005781 ORTHO05D006835 9.5e-20 100.1 104 50.0
BcaB01g05237 Brassica carinata HOM05D005781 ORTHO05D006835 2.1e-19 99.0 107 48.6
AL6G27950 Arabidopsis lyrata HOM05D005781 ORTHO05D006835 2.8e-19 98.6 103 49.5
C03p09360 Brassica napus HOM05D005781 ORTHO05D006835 3.6e-19 98.2 109 47.7
Medtr5g009535 Medicago truncatula HOM05D005781 ORTHO05D006835 1.1e-18 96.7 84 53.6
Carub.0006s1516 Capsella rubella HOM05D005781 ORTHO05D006835 1.4e-18 96.3 104 49.0
ATR0626G090 Amborella trichopoda HOM05D005781 ORTHO05D006835 3.1e-18 95.1 81 56.8
SGA_v2.0_scaffold57G20299 Striga asiatica HOM05D005781 ORTHO05D006835 1.3e-16 89.7 80 55.0
HanXRQChr08g0228461 Helianthus annuus HOM05D005781 ORTHO05D006835 9.2e-15 83.6 58 69.0
A09p11320 Brassica napus HOM05D005781 ORTHO05D006835 7.8e-14 80.5 87 44.8
BraA09t36770Z Brassica rapa HOM05D005781 ORTHO05D006835 7.8e-14 80.5 87 44.8
VMungo0251G3003 Vigna mungo HOM05D005781 ORTHO05D006835 3.0e-13 78.6 73 52.1
SalBow1G0213 Salvia bowleyana HOM05D005781 ORTHO05D006835 5.1e-13 77.8 81 51.9
Zm00001eb217150 Zea mays HOM05D000360 ORTHO05D006835 3.3e-12 75.1 70 52.9
Zm00001eb352440 Zea mays HOM05D000360 ORTHO05D006835 3.6e-11 71.6 54 59.3
Pp3c9_710 Physcomitrium patens HOM05D005781 ORTHO05D006835 1.4e-10 69.7 53 56.6
C09p13330 Brassica napus HOM05D005781 ORTHO05D006835 8.9e-10 67.0 76 40.8
BolC9t54226H Brassica oleracea HOM05D005781 ORTHO05D006835 8.9e-10 67.0 76 40.8
Mapoly0010s0158 Marchantia polymorpha HOM05D005781 ORTHO05D006835 1.5e-09 66.2 57 52.6
BcaC04g22979 Brassica carinata HOM05D005781 ORTHO05D006835 3.8e-08 61.6 49 51.0
Lalb_Chr07g0188641 Lupinus albus HOM05D005781 ORTHO05D006835 1.1e-07 60.1 49 53.1
BcaB01g05235 Brassica carinata HOM05D005781 ORTHO05D006835 3.2e-07 58.5 41 58.5
RcHm_v2.0_Chr1g0326231 Rosa chinensis HOM05D005781 ORTHO05D006835 4.2e-07 58.2 59 45.8
Zm00001eb318190 Zea mays HOM05D000360 ORTHO05D006835 9.3e-07 57.0 43 58.1


User provided reference genes

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