Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv12104 Davidia involucrata HOM05D004068 ORTHO05D004700 4.1e-59 231.1 110 100.0
Nn3g21863 Nelumbo nucifera HOM05D004068 ORTHO05D004700 9.5e-32 140.2 100 69.0
Manes.05G011200 Manihot esculenta HOM05D004068 ORTHO05D004700 1.6e-31 139.4 64 96.9
Prupe.3G006200 Prunus persica HOM05D004068 ORTHO05D004700 1.6e-31 139.4 64 96.9
Lsat_1_v5_gn_8_167400 Lactuca sativa HOM05D004068 ORTHO05D004700 2.8e-31 138.7 97 71.1
Ciclev10022090m.g Citrus clementina HOM05D004068 ORTHO05D004700 3.6e-31 138.3 64 95.3
Actinidia06383 Actinidia chinensis HOM05D004068 ORTHO05D004700 4.7e-31 137.9 64 95.3
Rhsim13G0001400 Rhododendron simsii HOM05D004068 ORTHO05D004700 4.7e-31 137.9 64 95.3
CANSAT54G1466 Cannabis sativa HOM05D004068 ORTHO05D004700 6.2e-31 137.5 64 93.8
COL.COLO4_23168 Corchorus olitorius HOM05D004068 ORTHO05D004700 6.2e-31 137.5 64 93.8
PSO170G5617 Papaver somniferum HOM05D004068 ORTHO05D004700 6.2e-31 137.5 64 93.8
PSO357G0073 Papaver somniferum HOM05D004068 ORTHO05D004700 6.2e-31 137.5 64 93.8
HanXRQChr16g0512461 Helianthus annuus HOM05D004068 ORTHO05D004700 1.1e-30 136.7 64 92.2
CSS0008406 Camellia sinensis var. sinensis HOM05D004068 ORTHO05D004700 1.4e-30 136.3 64 93.8
Duzib138G0863 Durio zibethinus HOM05D004068 ORTHO05D004700 1.4e-30 136.3 64 92.2
Hma1.2p1_0484F.1_g162840 Hydrangea macrophylla HOM05D004068 ORTHO05D004700 1.4e-30 136.3 64 93.8
TAR636G1362 Trochodendron aralioides HOM05D004068 ORTHO05D004700 1.4e-30 136.3 64 93.8
MSTRG.18070 Avicennia marina HOM05D004068 ORTHO05D004700 2.3e-30 135.6 64 92.2
Haze_05111 Corylus avellana HOM05D004068 ORTHO05D004700 2.3e-30 135.6 102 65.7
Glyma.10G009700 Glycine max HOM05D004068 ORTHO05D004700 2.3e-30 135.6 64 93.8
MD09G1287000 Malus domestica HOM05D004068 ORTHO05D004700 2.3e-30 135.6 64 93.8
Actinidia21362 Actinidia chinensis HOM05D004068 ORTHO05D004700 3.1e-30 135.2 64 93.8
Cpa.g.sc67.88 Carica papaya HOM05D004068 ORTHO05D004700 3.1e-30 135.2 64 92.2
Sc17g0000200 Simmondsia chinensis HOM05D004068 ORTHO05D004700 3.1e-30 135.2 64 92.2
SalBow6G1478 Salvia bowleyana HOM05D004068 ORTHO05D004700 4.0e-30 134.8 64 95.3
Nitab4.5_0004218g0050 Nicotiana tabacum HOM05D004068 ORTHO05D004700 5.2e-30 134.4 64 92.2
PGR083G2849 Punica granatum HOM05D004068 ORTHO05D004700 5.2e-30 134.4 64 90.6
Cfa004871 Carpinus fangiana HOM05D004068 ORTHO05D004700 6.8e-30 134.0 102 64.7
Lalb_Chr06g0167051 Lupinus albus HOM05D004068 ORTHO05D004700 6.8e-30 134.0 64 92.2
Aqoxy2G02578 Aquilegia oxysepala HOM05D004068 ORTHO05D004700 8.9e-30 133.7 64 93.8
CiPaw.08G084800 Carya illinoinensis HOM05D004068 ORTHO05D004700 8.9e-30 133.7 108 60.2
Gohir.A11G106800 Gossypium hirsutum HOM05D004068 ORTHO05D004700 8.9e-30 133.7 63 92.1
SGA_v2.0_scaffold417G51268 Striga asiatica HOM05D004068 ORTHO05D004700 8.9e-30 133.7 64 92.2
Thecc.01G321500 Theobroma cacao HOM05D004068 ORTHO05D004700 8.9e-30 133.7 64 92.2
GSVIVG01028194001 Vitis vinifera HOM05D004068 ORTHO05D004700 8.9e-30 133.7 64 89.1
DCAR_018255 Daucus carota HOM05D004068 ORTHO05D004700 1.2e-29 133.3 64 92.2
ECA236G4612 Erigeron canadensis HOM05D004068 ORTHO05D004700 1.2e-29 133.3 105 59.0
MD17G1279300 Malus domestica HOM05D004068 ORTHO05D004700 1.2e-29 133.3 64 92.2
Peaxi162Scf00919g00026 Petunia axillaris HOM05D004068 ORTHO05D004700 1.2e-29 133.3 64 90.6
Eucgr.H00894 Eucalyptus grandis HOM05D004068 ORTHO05D004700 1.5e-29 132.9 105 61.9
Gorai.007G119900 Gossypium raimondii HOM05D004068 ORTHO05D004700 1.5e-29 132.9 64 89.1
QL12p034273 Quercus lobata HOM05D004068 ORTHO05D004700 1.5e-29 132.9 109 61.5
Atru.chr5.916 Acer truncatum HOM05D004068 ORTHO05D004700 2.0e-29 132.5 64 90.6
Cc01_g21940 Coffea canephora HOM05D004068 ORTHO05D004700 2.0e-29 132.5 64 92.2
MELO3C023625.2 Cucumis melo HOM05D004068 ORTHO05D004700 2.0e-29 132.5 64 89.1
Glyma.02G009000 Glycine max HOM05D004068 ORTHO05D004700 2.0e-29 132.5 64 92.2
MBI19_g32706_MAGBIO Magnolia biondii HOM05D004068 ORTHO05D004700 2.0e-29 132.5 102 63.7
CSS0047755 Camellia sinensis var. sinensis HOM05D004068 ORTHO05D004700 2.6e-29 132.1 65 92.3
CsaV3_7G030310 Cucumis sativus L. HOM05D004068 ORTHO05D004700 2.6e-29 132.1 64 89.1
Duzib211G0484 Durio zibethinus HOM05D004068 ORTHO05D004700 3.4e-29 131.7 64 87.5
Migut.D00035 Erythranthe guttata HOM05D004068 ORTHO05D004700 3.4e-29 131.7 64 90.6
EL10As5g23587 Beta vulgaris HOM05D004068 ORTHO05D004700 4.4e-29 131.3 63 88.9
Gohir.D11G111800 Gossypium hirsutum HOM05D004068 ORTHO05D004700 4.4e-29 131.3 64 87.5
FvH4_1g26710 Fragaria vesca HOM05D004068 ORTHO05D004700 5.8e-29 131.0 64 89.1
FAN23G3049 Fragaria x ananassa HOM05D004068 ORTHO05D004700 5.8e-29 131.0 64 89.1
FAN28G2449 Fragaria x ananassa HOM05D004068 ORTHO05D004700 5.8e-29 131.0 64 89.1
RcHm_v2.0_Chr3g0486891 Rosa chinensis HOM05D004068 ORTHO05D004700 5.8e-29 131.0 64 89.1
unitig_90.g27445 Utricularia gibba HOM05D004068 ORTHO05D004700 7.5e-29 130.6 64 89.1
TWI14G0788 Tripterygium wilfordii HOM05D004068 ORTHO05D004700 9.9e-29 130.2 64 89.1
CAN.G100.22 Capsicum annuum HOM05D004068 ORTHO05D004700 1.7e-28 129.4 64 87.5
FAN26G1054 Fragaria x ananassa HOM05D004068 ORTHO05D004700 1.7e-28 129.4 64 87.5
Solyc01g068020.4 Solanum lycopersicum HOM05D004068 ORTHO05D004700 1.7e-28 129.4 64 87.5
Sopen01g029940 Solanum pennellii HOM05D004068 ORTHO05D004700 1.7e-28 129.4 64 87.5
PGSC0003DMG400005200 Solanum tuberosum HOM05D004068 ORTHO05D004700 1.7e-28 129.4 64 87.5
CSS0031477 Camellia sinensis var. sinensis HOM05D004068 ORTHO05D004700 2.2e-28 129.0 65 90.8
AUR62011741 Chenopodium quinoa HOM05D004068 ORTHO05D004700 2.2e-28 129.0 63 87.3
Solyc01g068030.3 Solanum lycopersicum HOM05D004068 ORTHO05D004700 2.2e-28 129.0 64 87.5
Sopen01g029950 Solanum pennellii HOM05D004068 ORTHO05D004700 2.2e-28 129.0 64 87.5
CiPaw.07G122600 Carya illinoinensis HOM05D004068 ORTHO05D004700 2.9e-28 128.6 64 84.4
AUR62024574 Chenopodium quinoa HOM05D004068 ORTHO05D004700 4.9e-28 127.9 63 85.7
Nitab4.5_0000222g0260 Nicotiana tabacum HOM05D004068 ORTHO05D004700 4.9e-28 127.9 64 89.1
Gohir.A07G130200 Gossypium hirsutum HOM05D004068 ORTHO05D004700 1.1e-27 126.7 64 84.4
Potri.014G115400 Populus trichocarpa HOM05D004068 ORTHO05D004700 1.1e-27 126.7 64 82.8
TAR633G0425 Trochodendron aralioides HOM05D004068 ORTHO05D004700 1.9e-27 125.9 64 84.4
Gorai.001G146300 Gossypium raimondii HOM05D004068 ORTHO05D004700 2.4e-27 125.6 64 82.8
Potri.002G190300 Populus trichocarpa HOM05D004068 ORTHO05D004700 2.4e-27 125.6 64 82.8
PGR083G1259 Punica granatum HOM05D004068 ORTHO05D004700 2.4e-27 125.6 64 84.4
CAN.G100.23 Capsicum annuum HOM05D004068 ORTHO05D004700 4.1e-27 124.8 63 82.5
HPP92_010032 Vanilla planifolia HOM05D004068 ORTHO05D004700 5.4e-27 124.4 64 81.2
Gohir.D07G134600 Gossypium hirsutum HOM05D004068 ORTHO05D004700 7.1e-27 124.0 64 81.2
Sed0019105 Sechium edule HOM05D004068 ORTHO05D004700 7.1e-27 124.0 64 82.8
Aa31LG1G10110 Aethionema arabicum HOM05D004068 ORTHO05D004700 1.2e-26 123.2 64 78.1
AL1G11820 Arabidopsis lyrata HOM05D004068 ORTHO05D004700 1.6e-26 122.9 64 78.1
AT1G02475 Arabidopsis thaliana HOM05D004068 ORTHO05D004700 1.6e-26 122.9 64 78.1
A10p01270 Brassica napus HOM05D004068 ORTHO05D004700 1.6e-26 122.9 64 78.1
C05p01270 Brassica napus HOM05D004068 ORTHO05D004700 1.6e-26 122.9 64 78.1
CARHR001800 Cardamine hirsuta HOM05D004068 ORTHO05D004700 1.6e-26 122.9 64 78.1
Thhalv10008722m.g Eutrema salsugineum HOM05D004068 ORTHO05D004700 1.6e-26 122.9 64 78.1
FAN19G0978 Fragaria x ananassa HOM05D004068 ORTHO05D004700 1.6e-26 122.9 64 87.5
Sp1g01550 Schrenkiella parvula HOM05D004068 ORTHO05D004700 1.6e-26 122.9 64 78.1
Hund09678 Selenicereus undatus HOM05D004068 ORTHO05D004700 1.6e-26 122.9 63 84.1
ATR0693G403 Amborella trichopoda HOM05D004068 ORTHO05D004700 2.1e-26 122.5 64 78.1
Zm00001eb131060 Zea mays HOM05D004068 ORTHO05D004700 2.1e-26 122.5 64 82.8
HanXRQChr06g0168031 Helianthus annuus HOM05D004068 ORTHO05D004700 2.7e-26 122.1 64 78.1
Sed0027961 Sechium edule HOM05D004068 ORTHO05D004700 2.7e-26 122.1 64 82.8
Medtr1g086340 Medicago truncatula HOM05D004068 ORTHO05D004700 3.5e-26 121.7 67 82.1
THA.LOC104801318 Tarenaya hassleriana HOM05D004068 ORTHO05D004700 3.5e-26 121.7 71 76.1
BcaB03g15774 Brassica carinata HOM05D004068 ORTHO05D004700 4.6e-26 121.3 64 76.6
Sabra02G0165200 Salix brachista HOM05D004068 ORTHO05D004700 6.0e-26 120.9 63 81.0
Carub.0006s3535 Capsella rubella HOM05D004068 ORTHO05D004700 7.8e-26 120.6 64 76.6
Carub.0001s0155 Capsella rubella HOM05D004068 ORTHO05D004700 1.0e-25 120.2 64 76.6
BcaB01g02105 Brassica carinata HOM05D004068 ORTHO05D004700 1.3e-25 119.8 64 78.1
Sp6g01730 Schrenkiella parvula HOM05D004068 ORTHO05D004700 2.3e-25 119.0 64 78.1
AT4G01883 Arabidopsis thaliana HOM05D004068 ORTHO05D004700 3.9e-25 118.2 64 73.4
BcaC04g24068 Brassica carinata HOM05D004068 ORTHO05D004700 5.1e-25 117.9 64 76.6
CARHR249850 Cardamine hirsuta HOM05D004068 ORTHO05D004700 8.6e-25 117.1 63 76.2
THA.LOC104801319 Tarenaya hassleriana HOM05D004068 ORTHO05D004700 1.9e-24 115.9 64 76.6
BcaC07g42396 Brassica carinata HOM05D004068 ORTHO05D004700 2.5e-24 115.5 64 71.9
Thhalv10028926m.g Eutrema salsugineum HOM05D004068 ORTHO05D004700 2.5e-24 115.5 64 75.0
Thhalv10028927m.g Eutrema salsugineum HOM05D004068 ORTHO05D004700 2.5e-24 115.5 64 75.0
Sabra14G0085500 Salix brachista HOM05D004068 ORTHO05D004700 5.6e-24 114.4 85 62.4
AL6G51410 Arabidopsis lyrata HOM05D004068 ORTHO05D004700 1.6e-23 112.8 67 70.1
C09p01400 Brassica napus HOM05D004068 ORTHO05D004700 3.6e-23 111.7 66 72.7
SEGI_19128 Sequoiadendron giganteum HOM05D004068 ORTHO05D004700 8.1e-23 110.5 64 68.8
Lj1A11T70 Lonicera japonica HOM05D004068 ORTHO05D004700 1.1e-22 110.2 51 94.1
BolC9t53073H Brassica oleracea HOM05D004068 ORTHO05D004700 1.8e-22 109.4 72 66.7
AagrBONN_evm.TU.Sc2ySwM_228.3301 Anthoceros agrestis HOM05D004068 ORTHO05D004700 2.4e-22 109.0 64 68.8
Mapoly0066s0015 Marchantia polymorpha HOM05D004068 ORTHO05D004700 2.6e-21 105.5 64 67.2
HPP92_015252 Vanilla planifolia HOM05D004068 ORTHO05D004700 5.8e-21 104.4 52 80.8
SMO134G0067 Selaginella moellendorffii HOM05D004068 ORTHO05D004700 9.9e-21 103.6 64 67.2
BolC5t28909H Brassica oleracea HOM05D004068 ORTHO05D004700 2.2e-20 102.4 66 68.2
BraA10t42405Z Brassica rapa HOM05D004068 ORTHO05D004700 3.8e-20 101.7 65 67.7
Pp3c26_7940 Physcomitrium patens HOM05D004068 ORTHO05D004700 1.9e-19 99.4 64 59.4
Pp3c9_13510 Physcomitrium patens HOM05D004068 ORTHO05D004700 3.2e-19 98.6 64 60.9
Phvul.007G211200 Phaseolus vulgaris HOM05D004068 ORTHO05D004700 1.2e-18 96.7 51 88.2
CDE02G2955 Ceratophyllum demersum HOM05D000037 ORTHO05D001684 2.1e-18 95.9 52 82.7
Thhalv10008621m.g Eutrema salsugineum HOM05D004068 ORTHO05D004700 3.5e-18 95.1 64 56.2
CBR_g29411 Chara braunii HOM05D004068 ORTHO05D004700 4.6e-18 94.7 64 60.9
AT1G02470 Arabidopsis thaliana HOM05D004068 ORTHO05D004700 6.0e-18 94.4 64 57.8
Lj5g0018153 Lotus japonicus HOM05D004068 ORTHO05D004700 6.0e-18 94.4 55 76.4
vmacro09333 Vaccinium macrocarpon HOM05D004068 ORTHO05D004700 6.0e-18 94.4 46 93.5
Carub.0001s0154 Capsella rubella HOM05D004068 ORTHO05D004700 7.8e-18 94.0 64 56.2
CARHR001790 Cardamine hirsuta HOM05D004068 ORTHO05D004700 1.3e-17 93.2 64 54.7
Sp1g01540 Schrenkiella parvula HOM05D004068 ORTHO05D004700 1.3e-17 93.2 64 53.1
AL1G11810 Arabidopsis lyrata HOM05D004068 ORTHO05D004700 1.7e-17 92.8 64 57.8
BcaC07g42395 Brassica carinata HOM05D004068 ORTHO05D004700 1.7e-17 92.8 64 53.1
A09p68650 Brassica napus HOM05D004068 ORTHO05D004700 1.7e-17 92.8 64 53.1
C08p53250 Brassica napus HOM05D004068 ORTHO05D004700 1.7e-17 92.8 64 53.1
BolC8t52840H Brassica oleracea HOM05D004068 ORTHO05D004700 1.7e-17 92.8 64 53.1
BraA09t42208Z Brassica rapa HOM05D004068 ORTHO05D004700 1.7e-17 92.8 64 53.1
Psat6g159440 Pisum sativum HOM05D004068 ORTHO05D004700 3.0e-17 92.0 46 89.1
Ah.02g112620 Amaranthus hybridus HOM05D004068 ORTHO05D004700 1.1e-16 90.1 46 82.6
A10p01260 Brassica napus HOM05D004068 ORTHO05D004700 1.1e-16 90.1 64 51.6
C05p01260 Brassica napus HOM05D004068 ORTHO05D004700 1.1e-16 90.1 64 51.6
BraA10t42404Z Brassica rapa HOM05D004068 ORTHO05D004700 1.1e-16 90.1 64 51.6
Cre14.g616250 Chlamydomonas reinhardtii HOM05D004068 ORTHO05D004700 4.3e-16 88.2 60 61.7
Aa31LG1G10100 Aethionema arabicum HOM05D004068 ORTHO05D004700 5.6e-16 87.8 64 53.1
THA.LOC104801317 Tarenaya hassleriana HOM05D004068 ORTHO05D004700 7.3e-16 87.4 64 56.2
VMungo0720G2238 Vigna mungo HOM05D004068 ORTHO05D004700 7.3e-16 87.4 61 67.2
Glyma.19G225300 Glycine max HOM05D004068 ORTHO05D004700 1.2e-15 86.7 85 54.1
TPR.G3089 Trifolium pratense HOM05D004068 ORTHO05D004700 2.1e-15 85.9 46 80.4
arahy.Tifrunner.gnm1.ann1.20WW32 Arachis hypogaea HOM05D004068 ORTHO05D004700 4.7e-15 84.7 42 90.5
arahy.Tifrunner.gnm1.ann1.G5UTBZ Arachis hypogaea HOM05D004068 ORTHO05D004700 4.7e-15 84.7 42 90.5
Ca_10252_v3 Cicer arietinum L. HOM05D004068 ORTHO05D004700 4.7e-15 84.7 64 60.9
BraA09t35801Z Brassica rapa HOM05D004068 ORTHO05D004700 5.8e-13 77.8 46 67.4
MCO03G258 Micromonas commoda HOM05D004068 ORTHO05D004700 6.4e-12 74.3 62 48.4
PRCOL_00002997 Prasinoderma coloniale HOM05D004068 ORTHO05D004700 9.3e-11 70.5 126 31.0
CAN.G257.121 Capsicum annuum HOM05D004068 ORTHO05D004700 9.6e-08 60.5 36 72.2


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