Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv12090 Davidia involucrata HOM05D007572 ORTHO05D009535 9.4e-74 280.0 134 100.0
Gohir.A07G131300 Gossypium hirsutum HOM05D007572 ORTHO05D009535 1.0e-51 206.8 135 73.3
Duzib138G0176 Durio zibethinus HOM05D007572 ORTHO05D009535 1.7e-51 206.1 135 72.6
CiPaw.08G083700 Carya illinoinensis HOM05D007572 ORTHO05D009535 2.9e-51 205.3 135 76.3
Potri.002G188300 Populus trichocarpa HOM05D007572 ORTHO05D009535 5.5e-50 201.1 135 74.1
Lj1g0010997 Lotus japonicus HOM05D007572 ORTHO05D009535 9.4e-50 200.3 134 70.9
PGR142G3328 Punica granatum HOM05D007572 ORTHO05D009535 9.4e-50 200.3 135 71.9
Glyma.03G223300 Glycine max HOM05D007572 ORTHO05D009535 1.2e-49 199.9 136 69.9
Gohir.D07G135600 Gossypium hirsutum HOM05D007572 ORTHO05D009535 2.1e-49 199.1 135 70.4
Medtr7g110410 Medicago truncatula HOM05D007572 ORTHO05D009535 1.0e-48 196.8 135 71.1
TWI23G0551 Tripterygium wilfordii HOM05D007572 ORTHO05D009535 1.4e-48 196.4 135 73.3
arahy.Tifrunner.gnm1.ann1.W6UB1T Arachis hypogaea HOM05D007572 ORTHO05D009535 4.4e-47 191.4 135 69.6
Psat3g018080 Pisum sativum HOM05D007572 ORTHO05D009535 5.7e-47 191.0 135 70.4
TPR.G2442 Trifolium pratense HOM05D007572 ORTHO05D009535 5.7e-47 191.0 135 70.4
arahy.Tifrunner.gnm1.ann1.XSK3JW Arachis hypogaea HOM05D007572 ORTHO05D009535 7.5e-47 190.7 135 68.9
Nn3g21914 Nelumbo nucifera HOM05D007572 ORTHO05D009535 1.7e-46 189.5 135 69.6
Sed0017651 Sechium edule HOM05D007572 ORTHO05D009535 2.2e-46 189.1 135 67.4
Lalb_Chr04g0260171 Lupinus albus HOM05D007572 ORTHO05D009535 1.1e-45 186.8 135 66.7
Manes.05G010100 Manihot esculenta HOM05D007572 ORTHO05D009535 1.4e-45 186.4 135 69.6
MELO3C034050.2 Cucumis melo HOM05D007572 ORTHO05D009535 1.8e-45 186.0 135 67.4
CsaV3_5G029750 Cucumis sativus L. HOM05D007572 ORTHO05D009535 1.8e-45 186.0 135 67.4
Eucgr.K00578 Eucalyptus grandis HOM05D007572 ORTHO05D009535 1.8e-45 186.0 135 68.1
Lsat_1_v5_gn_8_167180 Lactuca sativa HOM05D007572 ORTHO05D009535 7.0e-45 184.1 135 68.1
Phvul.001G217100 Phaseolus vulgaris HOM05D007572 ORTHO05D009535 2.0e-44 182.6 134 68.7
Sopen06g004090 Solanum pennellii HOM05D007572 ORTHO05D009535 1.0e-43 180.3 135 68.9
CAN.G1280.44 Capsicum annuum HOM05D007572 ORTHO05D009535 6.6e-43 177.6 138 65.9
Hund11629 Selenicereus undatus HOM05D007572 ORTHO05D009535 6.6e-43 177.6 134 65.7
Solyc06g009340.4 Solanum lycopersicum HOM05D007572 ORTHO05D009535 1.1e-42 176.8 135 67.4
vmacro16962 Vaccinium macrocarpon HOM05D007572 ORTHO05D009535 1.5e-42 176.4 117 74.4
HanXRQChr13g0414461 Helianthus annuus HOM05D007572 ORTHO05D009535 1.9e-42 176.0 134 65.7
Aqoxy2G02521 Aquilegia oxysepala HOM05D007572 ORTHO05D009535 1.6e-41 172.9 134 65.7
Nitab4.5_0003324g0080 Nicotiana tabacum HOM05D007572 ORTHO05D009535 3.6e-41 171.8 139 64.0
BraA09t40838Z Brassica rapa HOM05D007572 ORTHO05D009535 2.6e-39 165.6 139 60.4
Sp5g01190 Schrenkiella parvula HOM05D007572 ORTHO05D009535 5.7e-39 164.5 139 59.7
Oeu052583.1 Olea europaea HOM05D007572 ORTHO05D009535 9.8e-39 163.7 134 61.2
Thhalv10006305m.g Eutrema salsugineum HOM05D007572 ORTHO05D009535 2.2e-38 162.5 139 59.7
C08p37130 Brassica napus HOM05D007572 ORTHO05D009535 4.9e-38 161.4 139 59.7
BolC8t51291H Brassica oleracea HOM05D007572 ORTHO05D009535 4.9e-38 161.4 139 59.7
AT3G62190 Arabidopsis thaliana HOM05D007572 ORTHO05D009535 6.4e-38 161.0 139 59.0
VMungo1383G1880 Vigna mungo HOM05D007572 ORTHO05D009535 1.4e-37 159.8 124 66.1
Nitab4.5_0000363g0140 Nicotiana tabacum HOM05D007572 ORTHO05D009535 3.2e-37 158.7 114 68.4
AL5G44940 Arabidopsis lyrata HOM05D007572 ORTHO05D009535 4.1e-37 158.3 139 58.3
PGSC0003DMG400007276 Solanum tuberosum HOM05D007572 ORTHO05D009535 9.2e-37 157.1 113 68.1
Cc01_g21830 Coffea canephora HOM05D007572 ORTHO05D009535 2.0e-36 156.0 134 56.7
Carub.0005s2892 Capsella rubella HOM05D007572 ORTHO05D009535 3.5e-36 155.2 139 58.3
ATR0796G039 Amborella trichopoda HOM05D007572 ORTHO05D009535 3.9e-35 151.8 130 60.8
CDE02G1692 Ceratophyllum demersum HOM05D007572 ORTHO05D009535 5.0e-35 151.4 135 57.0
Rhsim01G0293200 Rhododendron simsii HOM05D007572 ORTHO05D009535 1.1e-34 150.2 191 47.6
Zm00001eb110000 Zea mays HOM05D007572 ORTHO05D009535 7.3e-34 147.5 134 56.7
PSO210G6566 Papaver somniferum HOM05D007572 ORTHO05D009535 1.6e-33 146.4 145 54.5
Ah.11g045850 Amaranthus hybridus HOM05D007572 ORTHO05D009535 1.7e-30 136.3 113 61.9
A09p54260 Brassica napus HOM05D007572 ORTHO05D009535 1.4e-29 133.3 125 56.8
SalBow6G4072 Salvia bowleyana HOM05D007572 ORTHO05D009535 9.2e-29 130.6 134 50.7
Peaxi162Scf00058g02018 Petunia axillaris HOM05D007572 ORTHO05D009535 1.6e-28 129.8 112 58.0
unitig_60.g25647 Utricularia gibba HOM05D007572 ORTHO05D009535 2.0e-28 129.4 140 52.9
Aa31LG10G16130 Aethionema arabicum HOM05D007572 ORTHO05D009535 1.0e-27 127.1 186 41.9
Migut.D00021 Erythranthe guttata HOM05D007572 ORTHO05D009535 8.1e-25 117.5 152 46.7
Thecc.01G323700 Theobroma cacao HOM05D000023 ORTHO05D000014 5.2e-24 114.8 64 81.2
Gorai.001G147700 Gossypium raimondii HOM05D007572 ORTHO05D009535 8.9e-24 114.0 64 78.1
SGA_v2.0_scaffold80G25682 Striga asiatica HOM05D007572 ORTHO05D009535 1.2e-23 113.6 172 40.1
Duzib133G1540 Durio zibethinus HOM05D007572 ORTHO05D009535 1.5e-23 113.2 64 78.1
Pp3c17_19540 Physcomitrium patens HOM05D007572 ORTHO05D009535 5.8e-23 111.3 139 48.2
Sabra02G0167000 Salix brachista HOM05D007572 ORTHO05D009535 1.1e-21 107.1 64 78.1
BcaC07g40711 Brassica carinata HOM05D007572 ORTHO05D009535 1.9e-21 106.3 125 51.2
Cfa004892 Carpinus fangiana HOM05D007572 ORTHO05D009535 2.4e-21 105.9 74 68.9
Haze_05130 Corylus avellana HOM05D007572 ORTHO05D009535 3.2e-21 105.5 64 78.1
DCAR_002931 Daucus carota HOM05D007572 ORTHO05D009535 5.4e-21 104.8 73 69.9
Sc05g0000110 Simmondsia chinensis HOM05D007572 ORTHO05D009535 2.1e-20 102.8 64 68.8
QL12p034502 Quercus lobata HOM05D007572 ORTHO05D009535 2.7e-20 102.4 85 60.0
MBI18_g10389_MAGBIO Magnolia biondii HOM05D007572 ORTHO05D009535 3.0e-19 99.0 67 67.2
AUR62011699 Chenopodium quinoa HOM05D007572 ORTHO05D009535 1.5e-18 96.7 64 67.2
AagrBONN_evm.TU.Sc2ySwM_228.110 Anthoceros agrestis HOM05D007572 ORTHO05D009535 2.5e-18 95.9 137 40.9
PSO761G0106 Papaver somniferum HOM05D007572 ORTHO05D009535 5.6e-18 94.7 68 67.6
COL.COLO4_23146 Corchorus olitorius HOM05D000023 ORTHO05D000014 7.3e-18 94.4 53 79.2
Atru.chr5.887 Acer truncatum HOM05D007572 ORTHO05D009535 9.5e-18 94.0 54 75.9
Gorai.001G147500 Gossypium raimondii HOM05D007572 ORTHO05D009535 9.5e-18 94.0 85 60.0
Thecc.01G323600 Theobroma cacao HOM05D007572 ORTHO05D009535 9.5e-18 94.0 73 63.0
Ciclev10024492m.g Citrus clementina HOM05D007572 ORTHO05D009535 2.1e-17 92.8 50 84.0
GSVIVG01028266001 Vitis vinifera HOM05D007572 ORTHO05D009535 1.8e-16 89.7 64 68.8
TAR636G1955 Trochodendron aralioides HOM05D007572 ORTHO05D009535 3.1e-16 89.0 56 71.4
Ciclev10023453m.g Citrus clementina HOM05D007572 ORTHO05D009535 2.0e-15 86.3 53 75.5
GSVIVG01028267001 Vitis vinifera HOM05D007572 ORTHO05D009535 2.6e-15 85.9 73 58.9
ClCG11G013240 Citrullus lanatus HOM05D007572 ORTHO05D009535 4.4e-15 85.1 55 70.9
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 7.6e-15 84.3 61 65.6
Sabra02G0166900 Salix brachista HOM05D000023 ORTHO05D000014 7.6e-15 84.3 51 74.5
CBR_g88332 Chara braunii HOM05D007572 ORTHO05D009535 2.2e-14 82.8 160 36.2
SEGI_13004 Sequoiadendron giganteum HOM05D007572 ORTHO05D009535 7.1e-13 77.8 66 62.1
Glyma.19G220500 Glycine max HOM05D007572 ORTHO05D009535 9.2e-13 77.4 141 37.6
CANSAT01G2141 Cannabis sativa HOM05D007572 ORTHO05D009535 1.2e-12 77.0 62 59.7
Os07g0637100 Oryza sativa ssp. japonica HOM05D007572 ORTHO05D009535 1.3e-11 73.6 54 61.1
CARHR172530 Cardamine hirsuta HOM05D007572 ORTHO05D009535 5.1e-11 71.6 70 51.4
Atru.chr5.884 Acer truncatum HOM05D007572 ORTHO05D009535 8.6e-11 70.9 46 67.4
BcaB07g33721 Brassica carinata HOM05D007572 ORTHO05D009535 4.7e-09 65.1 60 55.0
Gohir.A12G120600 Gossypium hirsutum HOM05D007572 ORTHO05D009535 1.4e-08 63.5 55 54.5
Atru.chr5.886 Acer truncatum HOM05D007572 ORTHO05D009535 3.1e-08 62.4 55 61.8
Atru.chr5.889 Acer truncatum HOM05D007572 ORTHO05D009535 3.1e-08 62.4 55 61.8
TAR365G0305 Trochodendron aralioides HOM05D007572 ORTHO05D009535 2.0e-07 59.7 56 55.4
CAN.G151.20 Capsicum annuum HOM05D000329 ORTHO05D000833 3.4e-07 58.9 65 53.8
Os07g0637150 Oryza sativa ssp. japonica HOM05D007572 ORTHO05D009535 9.9e-07 57.4 47 57.4
AagrBONN_evm.TU.Sc2ySwM_362.2777 Anthoceros agrestis HOM05D007572 ORTHO05D009535 6.4e-06 54.7 71 40.8
MBI18_g10388_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 6.4e-06 54.7 56 57.1


User provided reference genes

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