Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv12076 Davidia involucrata HOM05D006834 ORTHO05D008623 4.6e-239 830.9 430 100.0
CSS0011680 Camellia sinensis var. sinensis HOM05D006834 ORTHO05D008623 3.5e-162 575.5 427 72.1
Actinidia21334 Actinidia chinensis HOM05D006834 ORTHO05D008623 1.8e-158 563.1 417 70.5
vmacro15952 Vaccinium macrocarpon HOM05D006834 ORTHO05D008623 5.4e-155 551.6 421 67.9
GSVIVG01028237001 Vitis vinifera HOM05D006834 ORTHO05D008623 4.2e-152 542.0 418 68.9
Atru.chr5.848 Acer truncatum HOM05D006834 ORTHO05D008623 2.6e-149 532.7 417 66.9
Rhsim01G0000800 Rhododendron simsii HOM05D006834 ORTHO05D008623 8.3e-148 527.7 421 66.3
QL12p035081 Quercus lobata HOM05D006834 ORTHO05D008623 1.1e-144 517.3 414 65.0
QL12p035100 Quercus lobata HOM05D006834 ORTHO05D008623 1.1e-144 517.3 414 65.0
PGR042G0322 Punica granatum HOM05D006834 ORTHO05D008623 2.3e-142 509.6 415 66.0
Thecc.01G326600 Theobroma cacao HOM05D006834 ORTHO05D008623 3.1e-142 509.2 415 63.9
Eucgr.A00997 Eucalyptus grandis HOM05D006834 ORTHO05D008623 1.3e-140 503.8 415 65.3
TWI59G0932 Tripterygium wilfordii HOM05D006834 ORTHO05D008623 1.3e-140 503.8 418 64.6
TWI14G0919 Tripterygium wilfordii HOM05D006834 ORTHO05D008623 1.7e-140 503.4 415 63.9
MBI18_g03845_MAGBIO Magnolia biondii HOM05D006834 ORTHO05D008623 4.9e-140 501.9 394 66.5
Cfa004921 Carpinus fangiana HOM05D006834 ORTHO05D008623 6.4e-140 501.5 420 63.8
TAR636G0448 Trochodendron aralioides HOM05D006834 ORTHO05D008623 1.1e-139 500.7 414 64.0
Duzib138G0585 Durio zibethinus HOM05D006834 ORTHO05D008623 5.4e-139 498.4 415 62.9
Gorai.008G133900 Gossypium raimondii HOM05D006834 ORTHO05D008623 7.8e-138 494.6 417 62.1
Ciclev10020225m.g Citrus clementina HOM05D006834 ORTHO05D008623 1.7e-137 493.4 417 63.5
TPR.G8370 Trifolium pratense HOM05D006834 ORTHO05D008623 5.0e-137 491.9 413 62.2
Lj1g0008019 Lotus japonicus HOM05D006834 ORTHO05D008623 1.5e-136 490.3 421 61.8
Cpa.g.sc57.31 Carica papaya HOM05D006834 ORTHO05D008623 1.9e-136 490.0 414 63.0
Sabra02G0148600 Salix brachista HOM05D006834 ORTHO05D008623 3.3e-136 489.2 419 64.2
Potri.002G186100 Populus trichocarpa HOM05D006834 ORTHO05D008623 5.6e-136 488.4 421 63.9
VMungo1383G1632 Vigna mungo HOM05D006834 ORTHO05D008623 5.6e-136 488.4 414 61.4
Lalb_Chr18g0046351 Lupinus albus HOM05D006834 ORTHO05D008623 7.3e-136 488.0 420 61.2
Phvul.001G218900 Phaseolus vulgaris HOM05D006834 ORTHO05D008623 9.5e-136 487.6 416 60.8
Gohir.A12G119200 Gossypium hirsutum HOM05D006834 ORTHO05D008623 2.1e-135 486.5 417 60.9
Psat3g017400 Pisum sativum HOM05D006834 ORTHO05D008623 3.6e-135 485.7 416 61.5
Nn4g25303 Nelumbo nucifera HOM05D006834 ORTHO05D008623 1.1e-134 484.2 421 60.6
Haze_05159 Corylus avellana HOM05D006834 ORTHO05D008623 1.8e-134 483.4 420 61.4
Medtr7g110820 Medicago truncatula HOM05D006834 ORTHO05D008623 3.1e-134 482.6 416 61.1
CiPaw.08G082000 Carya illinoinensis HOM05D006834 ORTHO05D008623 8.9e-134 481.1 416 61.8
Glyma.19G222100 Glycine max HOM05D006834 ORTHO05D008623 5.8e-133 478.4 418 60.5
Cc01_g21740 Coffea canephora HOM05D006834 ORTHO05D008623 1.1e-131 474.2 422 59.5
Aqoxy2G02436 Aquilegia oxysepala HOM05D006834 ORTHO05D008623 4.1e-131 472.2 419 59.9
CANSAT25G0194 Cannabis sativa HOM05D006834 ORTHO05D008623 1.5e-128 463.8 417 60.4
PGSC0003DMG401001116 Solanum tuberosum HOM05D006834 ORTHO05D008623 5.6e-128 461.8 422 59.0
MD09G1291400 Malus domestica HOM05D006834 ORTHO05D008623 1.4e-126 457.2 427 59.7
PSO761G0283 Papaver somniferum HOM05D006834 ORTHO05D008623 5.2e-126 455.3 430 57.7
Oeu008276.1 Olea europaea HOM05D006834 ORTHO05D008623 2.6e-125 453.0 449 56.6
HanXRQChr06g0167961 Helianthus annuus HOM05D006834 ORTHO05D008623 3.4e-125 452.6 424 57.5
Lsat_1_v5_gn_8_167261 Lactuca sativa HOM05D006834 ORTHO05D008623 1.3e-124 450.7 415 58.3
Nitab4.5_0007915g0010 Nicotiana tabacum HOM05D006834 ORTHO05D008623 8.3e-124 448.0 415 57.3
ClCG01G007130 Citrullus lanatus HOM05D006834 ORTHO05D008623 1.1e-123 447.6 423 56.0
PSO210G3353 Papaver somniferum HOM05D006834 ORTHO05D008623 1.9e-123 446.8 430 57.0
Nitab4.5_0003092g0080 Nicotiana tabacum HOM05D006834 ORTHO05D008623 5.4e-123 445.3 412 57.5
Carub.0005s2883 Capsella rubella HOM05D006834 ORTHO05D008623 7.1e-123 444.9 381 59.8
Sopen01g030580 Solanum pennellii HOM05D006834 ORTHO05D008623 1.6e-122 443.7 422 57.3
AL5G44760 Arabidopsis lyrata HOM05D006834 ORTHO05D008623 2.1e-122 443.4 381 59.8
Aa31LG10G16050 Aethionema arabicum HOM05D006834 ORTHO05D008623 3.5e-122 442.6 381 59.8
AL5G44880 Arabidopsis lyrata HOM05D006834 ORTHO05D008623 3.5e-122 442.6 381 59.6
CARHR172420 Cardamine hirsuta HOM05D006834 ORTHO05D008623 6.0e-122 441.8 381 59.1
CAN.G179.29 Capsicum annuum HOM05D006834 ORTHO05D008623 7.8e-122 441.4 415 58.3
CsaV3_5G017580 Cucumis sativus L. HOM05D006834 ORTHO05D008623 2.3e-121 439.9 418 55.3
Sed0016094 Sechium edule HOM05D006834 ORTHO05D008623 3.0e-121 439.5 417 55.6
AT3G62080 Arabidopsis thaliana HOM05D006834 ORTHO05D008623 1.5e-120 437.2 379 59.4
Thhalv10005996m.g Eutrema salsugineum HOM05D006834 ORTHO05D008623 1.2e-119 434.1 431 54.5
C08p37040 Brassica napus HOM05D006834 ORTHO05D008623 1.6e-119 433.7 381 59.3
BolC8t51281H Brassica oleracea HOM05D006834 ORTHO05D008623 4.7e-119 432.2 381 59.1
A09p54180 Brassica napus HOM05D006834 ORTHO05D008623 6.2e-119 431.8 427 54.6
BraA09t40830Z Brassica rapa HOM05D006834 ORTHO05D008623 3.1e-118 429.5 379 59.1
arahy.Tifrunner.gnm1.ann1.AJ9Z2K Arachis hypogaea HOM05D006834 ORTHO05D008623 5.2e-118 428.7 420 54.8
arahy.Tifrunner.gnm1.ann1.W0LIHS Arachis hypogaea HOM05D006834 ORTHO05D008623 1.5e-117 427.2 440 53.2
Sp5g01290 Schrenkiella parvula HOM05D006834 ORTHO05D008623 4.4e-117 425.6 381 57.2
AUR62001071 Chenopodium quinoa HOM05D006834 ORTHO05D008623 1.1e-115 421.0 380 58.7
AUR62032606 Chenopodium quinoa HOM05D006834 ORTHO05D008623 2.4e-115 419.9 380 57.9
MELO3C005199.2 Cucumis melo HOM05D006834 ORTHO05D008623 1.6e-114 417.2 377 57.0
FAN19G1238 Fragaria x ananassa HOM05D006834 ORTHO05D008623 7.8e-114 414.8 430 54.0
ATR0796G131 Amborella trichopoda HOM05D006834 ORTHO05D008623 1.0e-113 414.5 384 56.0
FvH4_1g26150 Fragaria vesca HOM05D006834 ORTHO05D008623 3.3e-112 409.5 430 53.7
Migut.D01683 Erythranthe guttata HOM05D006834 ORTHO05D008623 2.1e-111 406.8 422 54.3
THA.LOC104817424 Tarenaya hassleriana HOM05D006834 ORTHO05D008623 2.8e-111 406.4 416 53.8
ECA236G2058 Erigeron canadensis HOM05D006834 ORTHO05D007803 6.2e-111 405.2 398 55.8
FAN26G0527 Fragaria x ananassa HOM05D006834 ORTHO05D008623 6.2e-111 405.2 427 52.7
MSTRG.21731 Avicennia marina HOM05D006834 ORTHO05D008623 1.4e-110 404.1 423 53.2
BcaC07g40700 Brassica carinata HOM05D006834 ORTHO05D008623 1.5e-109 400.6 381 57.0
FAN23G1444 Fragaria x ananassa HOM05D006834 ORTHO05D008623 7.6e-109 398.3 417 53.2
Manes.05G007900 Manihot esculenta HOM05D006834 ORTHO05D008623 1.3e-108 397.5 325 64.0
RcHm_v2.0_Chr3g0485641 Rosa chinensis HOM05D006834 ORTHO05D008623 1.3e-108 397.5 357 60.5
Ca_09251_v3 Cicer arietinum L. HOM05D006834 ORTHO05D008623 7.1e-107 391.7 305 64.3
Ah.12g061380 Amaranthus hybridus HOM05D006834 ORTHO05D008623 1.2e-106 391.0 416 52.9
SGA_v2.0_scaffold310G48195 Striga asiatica HOM05D006834 ORTHO05D008623 6.6e-105 385.2 433 52.0
Hma1.2p1_0408F.1_g146240 Hydrangea macrophylla HOM05D006834 ORTHO05D008623 5.8e-101 372.1 273 74.0
EL10Ac9g22392 Beta vulgaris HOM05D006834 ORTHO05D008623 1.3e-100 370.9 382 51.3
DCAR_012294 Daucus carota HOM05D006834 ORTHO05D008623 2.1e-98 363.6 423 49.6
COL.COLO4_23116 Corchorus olitorius HOM05D006834 ORTHO05D008623 4.6e-98 362.5 327 63.0
Gohir.D12G123000 Gossypium hirsutum HOM05D006834 ORTHO05D008623 1.1e-94 351.3 315 61.6
CDE01G0777 Ceratophyllum demersum HOM05D006834 ORTHO05D008623 4.5e-93 345.9 381 50.4
Prupe.3G001500 Prunus persica HOM05D006834 ORTHO05D008623 1.4e-86 324.3 323 57.9
AUR62031719 Chenopodium quinoa HOM05D006834 ORTHO05D008623 1.9e-83 313.9 380 48.2
Pp3c3_29200 Physcomitrium patens HOM05D006834 ORTHO05D008623 2.7e-74 283.5 398 39.2
Mapoly0053s0040 Marchantia polymorpha HOM05D006834 ORTHO05D008623 2.0e-69 267.3 388 38.7
SMO339G0071 Selaginella moellendorffii HOM05D006834 ORTHO05D008623 2.5e-67 260.4 435 37.5
HPP92_001172 Vanilla planifolia HOM05D006834 ORTHO05D008623 3.2e-67 260.0 237 57.8
Os01g0286000 Oryza sativa ssp. japonica HOM05D006834 ORTHO05D008623 1.3e-63 248.1 403 38.0
Solyc01g079060.4 Solanum lycopersicum HOM05D006834 ORTHO05D008623 3.1e-62 243.4 204 56.9
Zm00001eb129510 Zea mays HOM05D006834 ORTHO05D008623 5.3e-62 242.7 382 39.5
Sc05g0000050 Simmondsia chinensis HOM05D006834 ORTHO05D008623 1.5e-61 241.1 212 55.7
Peaxi162Scf00309g00622 Petunia axillaris HOM05D006834 ORTHO05D008623 1.0e-52 211.8 218 58.3
Peaxi162Scf00309g00627 Petunia axillaris HOM05D006834 ORTHO05D008623 3.6e-42 176.8 209 47.4
Hma1.2p1_1735F.1_g299880 Hydrangea macrophylla HOM05D006834 ORTHO05D008623 1.5e-32 144.8 87 79.3
MELO3C028884.2 Cucumis melo HOM05D006834 ORTHO05D008623 3.7e-23 113.6 108 54.6
CBR_g12374 Chara braunii HOM05D006834 ORTHO05D008623 2.3e-20 104.4 308 29.2
MELO3C033776.2 Cucumis melo HOM05D006834 ORTHO05D008623 5.8e-16 89.7 67 59.7
MELO3C032404.2 Cucumis melo HOM05D006834 ORTHO05D008623 4.9e-15 86.7 56 64.3
MELO3C005268.2 Cucumis melo HOM05D006834 ORTHO05D008623 3.2e-14 84.0 67 58.2
HPP92_010139 Vanilla planifolia HOM05D006834 ORTHO05D008623 3.0e-12 77.4 122 43.4
Sc05g0000060 Simmondsia chinensis HOM05D006834 ORTHO05D008623 4.3e-11 73.6 97 48.5
SGA_v2.0_scaffold81G26073 Striga asiatica HOM05D006834 ORTHO05D008623 4.0e-09 67.0 100 42.0
MELO3C029443.2 Cucumis melo HOM05D006834 ORTHO05D008623 1.4e-06 58.5 42 69.0


User provided reference genes

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