Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv12051 Davidia involucrata HOM05D004911 ORTHO05D005930 0.0e+00 2243.0 1128 100.0
CSS0020868 Camellia sinensis var. sinensis HOM05D004911 ORTHO05D005930 0.0e+00 1687.5 1133 75.5
Actinidia04316 Actinidia chinensis HOM05D004911 ORTHO05D005930 0.0e+00 1646.7 1143 73.5
GSVIVG01010210001 Vitis vinifera HOM05D004911 ORTHO05D005930 0.0e+00 1624.4 1130 72.8
Lj3C852G13 Lonicera japonica HOM05D004911 ORTHO05D005930 0.0e+00 1604.0 1138 72.9
Rhsim09G0072200 Rhododendron simsii HOM05D004911 ORTHO05D005930 0.0e+00 1591.6 1171 70.6
Hma1.2p1_0183F.1_g081050 Hydrangea macrophylla HOM05D004911 ORTHO05D005930 0.0e+00 1563.5 1087 74.6
Nn3g18681 Nelumbo nucifera HOM05D004911 ORTHO05D005930 0.0e+00 1518.8 1138 68.3
vmacro16011 Vaccinium macrocarpon HOM05D004911 ORTHO05D005930 0.0e+00 1496.5 1142 68.7
Prupe.2G211300 Prunus persica HOM05D004911 ORTHO05D005930 0.0e+00 1491.5 1147 67.5
Atru.chr11.1224 Acer truncatum HOM05D004911 ORTHO05D005930 0.0e+00 1486.1 1136 65.9
RcHm_v2.0_Chr1g0362961 Rosa chinensis HOM05D004911 ORTHO05D005930 0.0e+00 1478.4 1131 67.0
Cfa008718 Carpinus fangiana HOM05D004911 ORTHO05D005930 0.0e+00 1477.2 1140 67.2
FAN10G0928 Fragaria x ananassa HOM05D004911 ORTHO05D005930 0.0e+00 1476.5 1131 66.9
FAN10G1537 Fragaria x ananassa HOM05D004911 ORTHO05D005930 0.0e+00 1472.2 1131 66.7
Potri.008G085300 Populus trichocarpa HOM05D004911 ORTHO05D005930 0.0e+00 1471.1 1133 67.0
FAN03G1024 Fragaria x ananassa HOM05D004911 ORTHO05D005930 0.0e+00 1469.5 1131 66.5
Ciclev10030563m.g Citrus clementina HOM05D004911 ORTHO05D005930 0.0e+00 1468.4 1126 66.5
TWI53G1120 Tripterygium wilfordii HOM05D004911 ORTHO05D005930 0.0e+00 1466.8 1135 66.4
FAN01G1211 Fragaria x ananassa HOM05D004911 ORTHO05D005930 0.0e+00 1462.2 1133 66.2
CANSAT56G0121 Cannabis sativa HOM05D004911 ORTHO05D005930 0.0e+00 1461.4 1139 65.8
FvH4_7g19060 Fragaria vesca HOM05D004911 ORTHO05D005930 0.0e+00 1458.7 1130 66.0
Sabra08G0063200 Salix brachista HOM05D004911 ORTHO05D005930 0.0e+00 1456.8 1148 65.8
PSO063G3537 Papaver somniferum HOM05D004911 ORTHO05D005930 0.0e+00 1453.7 1142 65.1
FAN06G4750 Fragaria x ananassa HOM05D004911 ORTHO05D005930 0.0e+00 1452.2 1130 65.8
MD07G1172300 Malus domestica HOM05D004911 ORTHO05D005930 0.0e+00 1451.4 1150 65.7
FAN06G1517 Fragaria x ananassa HOM05D004911 ORTHO05D005930 0.0e+00 1450.6 1130 65.7
MBI03_g33919_MAGBIO Magnolia biondii HOM05D004911 ORTHO05D005930 0.0e+00 1447.2 1130 65.9
PSO782G1502 Papaver somniferum HOM05D004911 ORTHO05D005930 0.0e+00 1446.4 1144 64.8
Thecc.02G295700 Theobroma cacao HOM05D004911 ORTHO05D005930 0.0e+00 1446.4 1130 64.1
Aqoxy3G04281 Aquilegia oxysepala HOM05D004911 ORTHO05D005930 0.0e+00 1442.6 1133 65.7
Manes.03G080800 Manihot esculenta HOM05D004911 ORTHO05D005930 0.0e+00 1442.2 1129 65.5
PGSC0003DMG400029831 Solanum tuberosum HOM05D004911 ORTHO05D005930 0.0e+00 1436.4 1138 64.0
MD01G1105900 Malus domestica HOM05D004911 ORTHO05D005930 0.0e+00 1431.8 1149 64.6
Solyc10g079850.2 Solanum lycopersicum HOM05D004911 ORTHO05D005930 0.0e+00 1431.8 1138 63.6
Nitab4.5_0000562g0030 Nicotiana tabacum HOM05D004911 ORTHO05D005930 0.0e+00 1430.2 1135 64.1
Sopen10g030460 Solanum pennellii HOM05D004911 ORTHO05D005930 0.0e+00 1427.2 1138 63.5
Lsat_1_v5_gn_0_9321 Lactuca sativa HOM05D004911 ORTHO05D005930 0.0e+00 1415.6 1141 64.9
Peaxi162Scf01315g00114 Petunia axillaris HOM05D004911 ORTHO05D005930 0.0e+00 1413.3 1132 64.2
Duzib251G0593 Durio zibethinus HOM05D004911 ORTHO05D005930 0.0e+00 1407.5 1130 63.5
Nitab4.5_0000677g0060 Nicotiana tabacum HOM05D004911 ORTHO05D005930 0.0e+00 1404.8 1135 63.5
DCAR_023433 Daucus carota HOM05D004911 ORTHO05D005930 0.0e+00 1394.8 1136 63.9
ECA246G1490 Erigeron canadensis HOM05D004911 ORTHO05D005930 0.0e+00 1385.9 1141 63.7
PGR044G1924 Punica granatum HOM05D004911 ORTHO05D005930 0.0e+00 1379.0 1129 62.7
EL10Ac9g22915 Beta vulgaris HOM05D004911 ORTHO05D005930 0.0e+00 1368.6 1149 61.6
HanXRQChr06g0175521 Helianthus annuus HOM05D004911 ORTHO05D005930 0.0e+00 1364.7 1158 63.4
Cpa.g.sc63.15 Carica papaya HOM05D004911 ORTHO05D005930 0.0e+00 1364.4 1139 62.6
Gohir.A04G143200 Gossypium hirsutum HOM05D004911 ORTHO05D005930 0.0e+00 1361.3 1132 61.4
Gorai.012G182900 Gossypium raimondii HOM05D004911 ORTHO05D005930 0.0e+00 1360.1 1132 61.3
Gohir.D04G186500 Gossypium hirsutum HOM05D004911 ORTHO05D005930 0.0e+00 1358.2 1132 61.3
ClCG01G007110 Citrullus lanatus HOM05D004911 ORTHO05D005930 0.0e+00 1352.8 1139 62.5
MELO3C005202.2 Cucumis melo HOM05D004911 ORTHO05D005930 0.0e+00 1348.6 1138 62.1
Glyma.12G027900 Glycine max HOM05D004911 ORTHO05D005930 0.0e+00 1345.5 1127 62.6
Lj3g0004396 Lotus japonicus HOM05D004911 ORTHO05D005930 0.0e+00 1343.9 1128 61.5
CsaV3_5G017560 Cucumis sativus L. HOM05D004911 ORTHO05D005930 0.0e+00 1342.8 1138 61.9
MSTRG.8077 Avicennia marina HOM05D004911 ORTHO05D005930 0.0e+00 1338.9 1134 61.2
Hund08529 Selenicereus undatus HOM05D004911 ORTHO05D005930 0.0e+00 1338.2 1146 61.3
VMungo1215G1051 Vigna mungo HOM05D004911 ORTHO05D005930 0.0e+00 1332.4 1126 62.5
Cc07_g19490 Coffea canephora HOM05D004911 ORTHO05D005930 0.0e+00 1330.9 1144 61.4
Sed0025480 Sechium edule HOM05D004911 ORTHO05D005930 0.0e+00 1330.5 1135 61.9
Psat7g173880 Pisum sativum HOM05D004911 ORTHO05D005930 0.0e+00 1327.4 1131 61.5
Glyma.11G102800 Glycine max HOM05D004911 ORTHO05D005930 0.0e+00 1316.6 1132 61.3
SalBow2G3529 Salvia bowleyana HOM05D004911 ORTHO05D005930 0.0e+00 1316.2 1136 60.9
Medtr4g074460 Medicago truncatula HOM05D004911 ORTHO05D005930 0.0e+00 1306.6 1131 60.8
Ca_25607_v3 Cicer arietinum L. HOM05D004911 ORTHO05D005930 0.0e+00 1306.2 1134 60.9
AUR62015197 Chenopodium quinoa HOM05D004911 ORTHO05D005930 0.0e+00 1302.0 1085 61.7
Ah.01g001680 Amaranthus hybridus HOM05D004911 ORTHO05D005930 0.0e+00 1290.0 1150 57.7
Lalb_Chr19g0139351 Lupinus albus HOM05D004911 ORTHO05D005930 0.0e+00 1288.5 1121 60.8
CAN.G1656.8 Capsicum annuum HOM05D004911 ORTHO05D005930 0.0e+00 1287.3 1030 63.9
COL.COLO4_16624 Corchorus olitorius HOM05D004911 ORTHO05D005930 0.0e+00 1277.3 1130 59.0
Sc06g0007820 Simmondsia chinensis HOM05D004911 ORTHO05D005930 0.0e+00 1258.8 1152 57.9
Migut.H02310 Erythranthe guttata HOM05D004911 ORTHO05D005930 0.0e+00 1250.7 1142 58.1
arahy.Tifrunner.gnm1.ann1.Q7DFN3 Arachis hypogaea HOM05D004911 ORTHO05D005930 0.0e+00 1243.0 996 62.8
Carub.0003s1976 Capsella rubella HOM05D004911 ORTHO05D005930 0.0e+00 1209.5 1140 55.8
AT3G19870 Arabidopsis thaliana HOM05D004911 ORTHO05D005930 0.0e+00 1204.9 1137 55.8
AL3G33410 Arabidopsis lyrata HOM05D004911 ORTHO05D005930 0.0e+00 1198.3 1137 55.7
CARHR095390 Cardamine hirsuta HOM05D004911 ORTHO05D005930 0.0e+00 1198.0 1145 55.8
Thhalv10019942m.g Eutrema salsugineum HOM05D004911 ORTHO05D005930 0.0e+00 1197.6 1140 55.4
SGA_v2.0_scaffold80G25956 Striga asiatica HOM05D004911 ORTHO05D005930 0.0e+00 1194.9 1105 57.8
THA.LOC104809147 Tarenaya hassleriana HOM05D004911 ORTHO05D005930 0.0e+00 1191.8 1129 57.1
ATR0564G294 Amborella trichopoda HOM05D004911 ORTHO05D005930 0.0e+00 1187.9 1172 54.6
Sp3g17890 Schrenkiella parvula HOM05D004911 ORTHO05D005930 0.0e+00 1181.4 1140 54.8
Aa31LG8G6640 Aethionema arabicum HOM05D004911 ORTHO05D005930 0.0e+00 1164.1 1132 54.0
A01p34870 Brassica napus HOM05D004911 ORTHO05D005930 0.0e+00 1161.0 1136 54.7
BolC1t04393H Brassica oleracea HOM05D004911 ORTHO05D005930 0.0e+00 1159.4 1136 54.5
BraA01t03570Z Brassica rapa HOM05D004911 ORTHO05D005930 0.0e+00 1158.7 1136 54.6
C01p44300 Brassica napus HOM05D004911 ORTHO05D005930 0.0e+00 1156.0 1136 54.4
unitig_22.g6363 Utricularia gibba HOM05D004911 ORTHO05D005930 0.0e+00 1151.7 1127 54.7
SHI04173 Sapria himalayana HOM05D004911 ORTHO05D005930 3.7e-296 1021.9 1159 49.7
Hma1.2p1_0183F.1_g081060 Hydrangea macrophylla HOM05D004911 ORTHO05D005930 3.1e-295 1018.8 646 78.9
TPR.G32325 Trifolium pratense HOM05D004911 ORTHO05D005930 2.7e-291 1005.7 903 58.8
QL03p043438 Quercus lobata HOM05D004911 ORTHO05D005930 3.6e-291 1005.4 640 76.4
BcaC09g48939 Brassica carinata HOM05D004911 ORTHO05D005930 4.8e-288 995.0 1129 49.5
Eucgr.J00848 Eucalyptus grandis HOM05D004911 ORTHO05D005930 6.5e-285 984.6 765 63.8
CiPaw.05G166600 Carya illinoinensis HOM05D004911 ORTHO05D005930 2.0e-278 963.0 656 72.1
Os02g0829400 Oryza sativa ssp. japonica HOM05D004911 ORTHO05D005930 7.2e-268 927.9 1142 47.2
CDE05G0535 Ceratophyllum demersum HOM05D004911 ORTHO05D005930 1.5e-260 903.7 1132 46.1
Oeu056145.2 Olea europaea HOM05D004911 ORTHO05D005930 2.5e-244 849.7 643 65.2
TAR371G0035 Trochodendron aralioides HOM05D004911 ORTHO05D005930 4.4e-241 839.0 559 74.2
AUR62017660 Chenopodium quinoa HOM05D004911 ORTHO05D005930 1.7e-237 827.0 644 65.2
Mapoly0023s0169 Marchantia polymorpha HOM05D004911 ORTHO05D005930 1.4e-218 764.2 1228 38.3
SMO367G0101 Selaginella moellendorffii HOM05D004911 ORTHO05D005930 1.4e-210 737.6 1153 39.7
Phvul.002G058701 Phaseolus vulgaris HOM05D004911 ORTHO05D005930 4.0e-210 736.1 558 67.2
Haze_11729 Corylus avellana HOM05D004911 ORTHO05D005930 3.4e-209 733.0 608 64.1
Pp3c23_5970 Physcomitrium patens HOM05D004911 ORTHO05D005930 1.1e-207 728.0 1233 36.7
Zm00001eb259390 Zea mays HOM05D004911 ORTHO05D005930 1.3e-195 688.0 644 55.1
Haze_11728 Corylus avellana HOM05D004911 ORTHO05D005930 4.1e-186 656.4 463 70.8
HPP92_012853 Vanilla planifolia HOM05D004911 ORTHO05D005930 7.6e-185 652.1 706 49.4
TAR371G0490 Trochodendron aralioides HOM05D004911 ORTHO05D005930 4.3e-180 636.3 518 63.9
CiPaw.05G166500 Carya illinoinensis HOM05D004911 ORTHO05D005930 9.7e-156 555.4 487 61.6
QL03p043434 Quercus lobata HOM05D004911 ORTHO05D005930 1.6e-142 511.5 487 57.5
CBR_g20270 Chara braunii HOM05D004911 ORTHO05D005930 3.2e-90 337.8 1597 24.5
HPP92_012844 Vanilla planifolia HOM05D004911 ORTHO05D005930 3.7e-86 324.3 752 35.0
AagrBONN_evm.TU.Sc2ySwM_228.3553 Anthoceros agrestis HOM05D004911 ORTHO05D005930 1.0e-80 306.2 516 38.4
SHI34912 Sapria himalayana HOM05D004911 ORTHO05D005930 1.3e-75 289.3 577 34.1
HPP92_012845 Vanilla planifolia HOM05D004911 ORTHO05D005930 9.3e-74 283.1 282 56.0
AagrBONN_evm.TU.Sc2ySwM_228.3554 Anthoceros agrestis HOM05D004911 ORTHO05D005930 6.3e-70 270.4 545 34.5
SHI47273 Sapria himalayana HOM05D004911 ORTHO05D005930 6.1e-65 253.8 524 32.4
SHI42568 Sapria himalayana HOM05D004911 ORTHO05D005930 3.1e-61 241.5 572 31.3
SHI38855 Sapria himalayana HOM05D004911 ORTHO05D005930 4.1e-61 241.1 374 41.2
SHI50333 Sapria himalayana HOM05D004911 ORTHO05D005930 3.6e-49 201.4 518 30.5
SHI45395 Sapria himalayana HOM05D004911 ORTHO05D005930 2.6e-47 195.3 669 27.2
SHI45716 Sapria himalayana HOM05D004911 ORTHO05D005930 2.6e-47 195.3 669 27.2
SHI53748 Sapria himalayana HOM05D004911 ORTHO05D005930 3.8e-43 181.4 235 44.3
SHI39005 Sapria himalayana HOM05D004911 ORTHO05D005930 2.3e-40 172.2 165 50.9
SHI39007 Sapria himalayana HOM05D004911 ORTHO05D005930 3.0e-40 171.8 364 34.3
SHI34911 Sapria himalayana HOM05D004911 ORTHO05D005930 1.7e-38 166.0 265 41.1
SHI49274 Sapria himalayana HOM05D004911 ORTHO05D005930 4.1e-37 161.4 206 46.1
SHI50603 Sapria himalayana HOM05D004911 ORTHO05D005930 3.7e-30 138.3 210 40.5
SHI39004 Sapria himalayana HOM05D004911 ORTHO05D005930 3.5e-28 131.7 203 41.9
SHI42567 Sapria himalayana HOM05D004911 ORTHO05D005930 7.7e-28 130.6 148 46.6
SHI51106 Sapria himalayana HOM05D004911 ORTHO05D005930 8.0e-25 120.6 94 57.4
VMungo0251G2567 Vigna mungo HOM05D004911 ORTHO05D018492 8.0e-25 120.6 79 72.2
SHI38854 Sapria himalayana HOM05D004911 ORTHO05D005930 7.0e-21 107.5 120 47.5
Dinv29855 Davidia involucrata HOM05D004911 ORTHO05D005930 4.5e-20 104.8 53 92.5
SHI45052 Sapria himalayana HOM05D004911 ORTHO05D005930 4.5e-20 104.8 240 29.6
SEGI_29886 Sequoiadendron giganteum HOM05D004911 ORTHO05D005930 1.3e-19 103.2 142 42.3
ATR0624G005 Amborella trichopoda HOM05D004911 ORTHO05D005930 3.8e-19 101.7 119 47.1
EL10Ac2g03601 Beta vulgaris HOM05D004911 ORTHO05D005930 5.8e-15 87.8 58 67.2
SHI45396 Sapria himalayana HOM05D004911 ORTHO05D005930 7.5e-15 87.4 221 29.9
SHI45717 Sapria himalayana HOM05D004911 ORTHO05D005930 7.5e-15 87.4 221 29.9
SHI45051 Sapria himalayana HOM05D004911 ORTHO05D005930 4.6e-12 78.2 52 69.2
Haze_13501 Corylus avellana HOM05D004911 ORTHO05D005930 1.3e-11 76.6 66 60.6
SHI52879 Sapria himalayana HOM05D004911 ORTHO05D005930 2.5e-10 72.4 150 34.7
SHI47080 Sapria himalayana HOM05D004911 ORTHO05D005930 1.2e-07 63.5 88 39.8


User provided reference genes

Program Settings