Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv11972 Davidia involucrata HOM05D007456 ORTHO05D009411 2.9e-92 343.6 171 100.0
Lj9A258G53 Lonicera japonica HOM05D007456 ORTHO05D009411 2.3e-33 147.9 145 54.5
Actinidia08731 Actinidia chinensis HOM05D007456 ORTHO05D009411 2.6e-29 134.4 139 52.5
Rhsim01G0125300 Rhododendron simsii HOM05D007456 ORTHO05D009411 8.5e-28 129.4 139 50.4
TAR375G0927 Trochodendron aralioides HOM05D007456 ORTHO05D009411 1.1e-27 129.0 142 51.4
TAR375G0715 Trochodendron aralioides HOM05D007456 ORTHO05D009411 1.6e-26 125.2 142 50.7
Lj1C1032G4 Lonicera japonica HOM05D007456 ORTHO05D009411 3.9e-25 120.6 131 48.1
Nn1g09307 Nelumbo nucifera HOM05D007456 ORTHO05D009411 4.8e-23 113.6 143 50.3
RcHm_v2.0_Chr1g0383591 Rosa chinensis HOM05D007456 ORTHO05D009411 1.9e-19 101.7 122 49.2
PGSC0003DMG400023682 Solanum tuberosum HOM05D007456 ORTHO05D009411 2.1e-18 98.2 124 46.8
Sopen10g030890 Solanum pennellii HOM05D007456 ORTHO05D009411 3.6e-18 97.4 117 49.6
Hma1.2p1_0758F.1_g213530 Hydrangea macrophylla HOM05D007456 ORTHO05D009411 8.0e-18 96.3 72 66.7
Peaxi162Scf00398g00211 Petunia axillaris HOM05D007456 ORTHO05D009411 1.4e-17 95.5 113 50.4
FvH4_7g33530 Fragaria vesca HOM05D007456 ORTHO05D009411 2.3e-17 94.7 122 46.7
CAN.G128.20 Capsicum annuum HOM05D007456 ORTHO05D009411 6.7e-17 93.2 125 47.2
FAN03G3193 Fragaria x ananassa HOM05D007456 ORTHO05D009411 8.8e-17 92.8 77 59.7
FvH4_7g33490 Fragaria vesca HOM05D007456 ORTHO05D009411 3.3e-16 90.9 122 46.7
FAN10G0306 Fragaria x ananassa HOM05D007456 ORTHO05D009411 3.3e-16 90.9 122 45.9
FAN10G3274 Fragaria x ananassa HOM05D007456 ORTHO05D009411 3.3e-16 90.9 122 45.9
Nitab4.5_0016432g0010 Nicotiana tabacum HOM05D007456 ORTHO05D009411 4.4e-16 90.5 130 45.4
Oeu055445.1 Olea europaea HOM05D007456 ORTHO05D009411 5.7e-16 90.1 61 68.9
Gohir.A05G338400 Gossypium hirsutum HOM05D007456 ORTHO05D009411 9.7e-16 89.4 74 56.8
Haze_00583 Corylus avellana HOM05D007456 ORTHO05D009411 1.7e-15 88.6 125 43.2
Thecc.05G207800 Theobroma cacao HOM05D007456 ORTHO05D009411 1.7e-15 88.6 142 37.3
Gorai.012G086600 Gossypium raimondii HOM05D007456 ORTHO05D009411 4.8e-15 87.0 74 55.4
Gohir.D04G076800 Gossypium hirsutum HOM05D007456 ORTHO05D009411 6.3e-15 86.7 74 55.4
vmacro06487 Vaccinium macrocarpon HOM05D007456 ORTHO05D009411 6.3e-15 86.7 91 51.6
Nitab4.5_0004532g0030 Nicotiana tabacum HOM05D007456 ORTHO05D009411 8.2e-15 86.3 145 42.1
Cc11_g03880 Coffea canephora HOM05D007456 ORTHO05D009411 4.1e-14 84.0 160 38.1
QL09p026466 Quercus lobata HOM05D007456 ORTHO05D009411 7.0e-14 83.2 74 55.4
QL09p026540 Quercus lobata HOM05D007456 ORTHO05D009411 7.0e-14 83.2 74 55.4
RcHm_v2.0_Chr1g0383651 Rosa chinensis HOM05D007456 ORTHO05D009411 9.1e-14 82.8 131 44.3
Manes.08G164911 Manihot esculenta HOM05D007456 ORTHO05D009411 2.0e-13 81.6 131 42.0
FAN01G1025 Fragaria x ananassa HOM05D007456 ORTHO05D009411 2.6e-13 81.3 122 44.3
GSVIVG01024456001 Vitis vinifera HOM05D007456 ORTHO05D009411 3.5e-13 80.9 64 65.6
CiPaw.06G020600 Carya illinoinensis HOM05D007456 ORTHO05D009411 1.0e-12 79.3 67 59.7
HanXRQChr09g0260511 Helianthus annuus HOM05D007456 ORTHO05D009411 1.3e-12 79.0 96 49.0
Lsat_1_v5_gn_4_134121 Lactuca sativa HOM05D007456 ORTHO05D009411 1.7e-12 78.6 108 44.4
Cfa015911 Carpinus fangiana HOM05D007456 ORTHO05D009411 2.2e-12 78.2 129 40.3
AUR62018885 Chenopodium quinoa HOM05D007456 ORTHO05D009411 2.2e-12 78.2 80 48.8
MSTRG.26940 Avicennia marina HOM05D007456 ORTHO05D009411 2.9e-12 77.8 143 36.4
Aqoxy3G00913 Aquilegia oxysepala HOM05D007456 ORTHO05D009411 5.0e-12 77.0 122 40.2
AUR62005926 Chenopodium quinoa HOM05D007456 ORTHO05D009411 5.0e-12 77.0 114 38.6
SGA_v2.0_scaffold44G16881 Striga asiatica HOM05D007456 ORTHO05D009411 6.5e-12 76.6 60 63.3
EL10Ac3g05110 Beta vulgaris HOM05D007456 ORTHO05D009411 1.1e-11 75.9 125 36.8
Ah.07g203680 Amaranthus hybridus HOM05D007456 ORTHO05D009411 1.2e-10 72.4 80 46.2
MBI13_g23885_MAGBIO Magnolia biondii HOM05D007456 ORTHO05D009411 2.1e-10 71.6 59 59.3
Sc19g0000290 Simmondsia chinensis HOM05D007456 ORTHO05D009411 2.1e-10 71.6 132 34.8
Cpa.g.sc252.22 Carica papaya HOM05D007456 ORTHO05D009411 2.7e-10 71.2 87 48.3
PGR142G2334 Punica granatum HOM05D007456 ORTHO05D009411 3.6e-10 70.9 60 58.3
SalBow4G3145 Salvia bowleyana HOM05D007456 ORTHO05D009411 3.6e-10 70.9 136 34.6
CsaV3_4G004450 Cucumis sativus L. HOM05D007456 ORTHO05D009411 4.7e-10 70.5 105 40.0
Ciclev10011504m.g Citrus clementina HOM05D007456 ORTHO05D009411 6.1e-10 70.1 123 40.7
Thhalv10004016m.g Eutrema salsugineum HOM05D007456 ORTHO05D009411 8.0e-10 69.7 80 45.0
THA.LOC104823813 Tarenaya hassleriana HOM05D007456 ORTHO05D009411 5.2e-09 67.0 60 51.7
ClCG07G017250 Citrullus lanatus HOM05D007456 ORTHO05D009411 8.8e-09 66.2 88 44.3
Glyma.11G013600 Glycine max HOM05D007456 ORTHO05D009411 1.5e-08 65.5 110 40.9
A04p10240 Brassica napus HOM05D007456 ORTHO05D009411 2.6e-08 64.7 60 51.7
BraA04t16690Z Brassica rapa HOM05D007456 ORTHO05D009411 2.6e-08 64.7 60 51.7
Sed0026452 Sechium edule HOM05D007456 ORTHO05D009411 3.4e-08 64.3 144 33.3
Hund09765 Selenicereus undatus HOM05D007456 ORTHO05D009411 3.4e-08 64.3 134 31.3
Glyma.01G230600 Glycine max HOM05D007456 ORTHO05D009411 5.7e-08 63.5 106 38.7
BcaB06g27033 Brassica carinata HOM05D007456 ORTHO05D009411 9.7e-08 62.8 60 51.7
CSS0006842 Camellia sinensis var. sinensis HOM05D007456 ORTHO05D009411 9.7e-08 62.8 36 86.1
Prupe.2G323300 Prunus persica HOM05D007456 ORTHO05D009411 9.7e-08 62.8 123 38.2
AL7G45310 Arabidopsis lyrata HOM05D007456 ORTHO05D009411 2.2e-07 61.6 60 50.0
BcaC02g09523 Brassica carinata HOM05D007456 ORTHO05D009411 2.2e-07 61.6 60 50.0
BolC4t25953H Brassica oleracea HOM05D007456 ORTHO05D009411 2.8e-07 61.2 60 50.0
Sp7g05790 Schrenkiella parvula HOM05D007456 ORTHO05D009411 2.8e-07 61.2 60 48.3
CDE02G0006 Ceratophyllum demersum HOM05D007456 ORTHO05D009411 4.8e-07 60.5 45 64.4
C04p43710 Brassica napus HOM05D007456 ORTHO05D009411 8.3e-07 59.7 60 48.3
MD01G1232900 Malus domestica HOM05D007456 ORTHO05D009411 8.3e-07 59.7 101 39.6
CDE02G0352 Ceratophyllum demersum HOM05D007456 ORTHO05D009411 1.1e-06 59.3 45 62.2
Migut.F00108 Erythranthe guttata HOM05D007456 ORTHO05D009411 3.1e-06 57.8 54 51.9
CANSAT54G1256 Cannabis sativa HOM05D007456 ORTHO05D028426 9.1e-06 56.2 57 45.6
FvH4_1g26290 Fragaria vesca HOM05D000003 ORTHO05D010713 9.1e-06 56.2 36 75.0
FAN19G0065 Fragaria x ananassa HOM05D007456 ORTHO05D009411 9.1e-06 56.2 36 75.0


User provided reference genes

Program Settings