Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv11899 Davidia involucrata HOM05D003892 ORTHO05D004522 1.4e-245 852.4 424 100.0
Dinv25081 Davidia involucrata HOM05D003892 ORTHO05D004522 7.6e-186 654.1 418 80.9
CSS0037074 Camellia sinensis var. sinensis HOM05D003892 ORTHO05D004522 4.0e-163 578.6 416 72.6
Hma1.2p1_0304F.1_g119340 Hydrangea macrophylla HOM05D003892 ORTHO05D004522 2.0e-162 576.2 405 73.6
Actinidia03963 Actinidia chinensis HOM05D003892 ORTHO05D004522 1.1e-155 553.9 437 68.2
TAR633G1336 Trochodendron aralioides HOM05D003892 ORTHO05D004522 1.3e-148 530.4 423 66.2
Lj1C1061G1 Lonicera japonica HOM05D003892 ORTHO05D004522 2.2e-148 529.6 413 68.8
GSVIVG01015854001 Vitis vinifera HOM05D003892 ORTHO05D004522 8.5e-145 517.7 421 65.6
Cfa017615 Carpinus fangiana HOM05D003892 ORTHO05D004522 4.3e-141 505.4 421 64.8
Potri.016G065600 Populus trichocarpa HOM05D003892 ORTHO05D004522 1.0e-137 494.2 406 66.7
Rhsim03G0058500 Rhododendron simsii HOM05D003892 ORTHO05D004522 1.2e-135 487.3 421 62.7
QL07p026283 Quercus lobata HOM05D003892 ORTHO05D004522 2.7e-135 486.1 415 63.9
Duzib106G1451 Durio zibethinus HOM05D003892 ORTHO05D004522 6.1e-135 485.0 412 61.4
Thecc.05G110400 Theobroma cacao HOM05D003892 ORTHO05D004522 4.8e-132 475.3 407 61.4
Manes.08G037500 Manihot esculenta HOM05D003892 ORTHO05D004522 4.1e-131 472.2 417 62.1
Potri.006G199200 Populus trichocarpa HOM05D003892 ORTHO05D004522 5.3e-131 471.9 412 64.6
Duzib128G1914 Durio zibethinus HOM05D003892 ORTHO05D004522 1.5e-130 470.3 412 60.0
CiPaw.10G021500 Carya illinoinensis HOM05D003892 ORTHO05D004522 1.3e-129 467.2 420 61.7
Ciclev10011278m.g Citrus clementina HOM05D003892 ORTHO05D004522 2.9e-129 466.1 415 61.7
DCAR_013462 Daucus carota HOM05D003892 ORTHO05D004522 2.9e-129 466.1 412 60.9
PGSC0003DMG400021344 Solanum tuberosum HOM05D003892 ORTHO05D004522 2.5e-128 463.0 410 58.3
COL.COLO4_29492 Corchorus olitorius HOM05D003892 ORTHO05D004522 6.1e-127 458.4 407 59.7
Sopen01g002690 Solanum pennellii HOM05D003892 ORTHO05D004522 2.6e-125 453.0 410 57.1
Gohir.D04G093300 Gossypium hirsutum HOM05D003892 ORTHO05D004522 2.2e-124 449.9 406 59.6
TWI15G0645 Tripterygium wilfordii HOM05D003892 ORTHO05D004522 2.8e-124 449.5 415 60.5
Solyc01g006700.3 Solanum lycopersicum HOM05D003892 ORTHO05D004522 8.2e-124 448.0 410 56.6
Nn2g14423 Nelumbo nucifera HOM05D003892 ORTHO05D004522 1.4e-123 447.2 429 58.5
Gohir.A01G199500 Gossypium hirsutum HOM05D003892 ORTHO05D004522 7.0e-123 444.9 406 59.4
Gohir.D01G189600 Gossypium hirsutum HOM05D003892 ORTHO05D004522 9.1e-123 444.5 406 59.6
Cc06_g06980 Coffea canephora HOM05D003892 ORTHO05D004522 1.2e-122 444.1 404 60.4
Haze_20130 Corylus avellana HOM05D003892 ORTHO05D004522 1.2e-122 444.1 448 56.0
Gorai.002G233300 Gossypium raimondii HOM05D003892 ORTHO05D004522 2.6e-122 443.0 406 59.6
Nitab4.5_0003430g0010 Nicotiana tabacum HOM05D003892 ORTHO05D004522 7.7e-122 441.4 411 57.2
Gorai.009G395500 Gossypium raimondii HOM05D003892 ORTHO05D004522 1.7e-121 440.3 406 58.6
HanXRQChr02g0052851 Helianthus annuus HOM05D003892 ORTHO05D004522 6.5e-121 438.3 417 59.0
HanXRQChr13g0398781 Helianthus annuus HOM05D003892 ORTHO05D004522 6.5e-121 438.3 417 58.3
TWI81G0594 Tripterygium wilfordii HOM05D003892 ORTHO05D004522 8.5e-121 438.0 416 57.9
CAN.G388.52 Capsicum annuum HOM05D003892 ORTHO05D004522 1.5e-120 437.2 416 55.8
Eucgr.A02543 Eucalyptus grandis HOM05D003892 ORTHO05D004522 1.2e-119 434.1 420 53.8
CANSAT64G1569 Cannabis sativa HOM05D003892 ORTHO05D004522 8.8e-118 427.9 416 57.0
CSS0004478 Camellia sinensis var. sinensis HOM05D003892 ORTHO05D004522 1.5e-117 427.2 324 69.8
MD14G1044900 Malus domestica HOM05D003892 ORTHO05D004522 5.7e-117 425.2 417 55.2
Atru.chr8.1281 Acer truncatum HOM05D003892 ORTHO05D004522 1.1e-115 421.0 434 55.3
Prupe.7G089700 Prunus persica HOM05D003892 ORTHO05D004522 2.7e-114 416.4 416 55.8
ClCG10G017850 Citrullus lanatus HOM05D003892 ORTHO05D004522 1.7e-113 413.7 409 56.2
Sabra16G0067100 Salix brachista HOM05D003892 ORTHO05D004522 1.1e-112 411.0 398 59.3
Aqoxy2G02397 Aquilegia oxysepala HOM05D003892 ORTHO05D004522 1.5e-112 410.6 421 54.4
THA.LOC104824220 Tarenaya hassleriana HOM05D003892 ORTHO05D004522 3.2e-112 409.5 426 52.3
GSVIVG01020969001 Vitis vinifera HOM05D003892 ORTHO05D004522 1.0e-110 404.4 362 61.6
MD12G1046200 Malus domestica HOM05D003892 ORTHO05D004522 1.4e-110 404.1 416 53.6
THA.LOC104825242 Tarenaya hassleriana HOM05D003892 ORTHO05D004522 1.4e-110 404.1 426 53.3
Oeu058130.1 Olea europaea HOM05D003892 ORTHO05D004522 3.0e-110 402.9 460 51.3
Sabra06G0153100 Salix brachista HOM05D003892 ORTHO05D004522 6.8e-110 401.7 416 57.9
Thhalv10010226m.g Eutrema salsugineum HOM05D003892 ORTHO05D004522 2.0e-109 400.2 410 52.7
Sc22g0003030 Simmondsia chinensis HOM05D003892 ORTHO05D004522 4.4e-109 399.1 413 54.7
Sp5g07700 Schrenkiella parvula HOM05D003892 ORTHO05D004522 9.8e-109 397.9 409 53.3
ECA233G3816 Erigeron canadensis HOM05D003892 ORTHO05D004522 1.7e-108 397.1 415 54.5
arahy.Tifrunner.gnm1.ann1.IGZ3F9 Arachis hypogaea HOM05D003892 ORTHO05D004522 2.8e-108 396.4 424 54.2
Lj1g0007585 Lotus japonicus HOM05D003892 ORTHO05D004522 4.8e-108 395.6 421 54.6
CsaV3_3G038440 Cucumis sativus L. HOM05D003892 ORTHO05D004522 8.3e-108 394.8 409 54.8
Lalb_Chr01g0017711 Lupinus albus HOM05D003892 ORTHO05D004522 8.3e-108 394.8 415 54.5
Lalb_Chr25g0287841 Lupinus albus HOM05D003892 ORTHO05D004522 8.3e-108 394.8 416 54.3
Hund10790 Selenicereus undatus HOM05D003892 ORTHO05D004522 1.1e-107 394.4 419 53.2
AT3G54750 Arabidopsis thaliana HOM05D003892 ORTHO05D004522 1.4e-107 394.0 410 51.5
Glyma.19G202400 Glycine max HOM05D003892 ORTHO05D004522 1.4e-107 394.0 413 55.0
MBI11_g33439_MAGBIO Magnolia biondii HOM05D003892 ORTHO05D004522 1.8e-107 393.7 324 64.5
AUR62038416 Chenopodium quinoa HOM05D003892 ORTHO05D004522 5.4e-107 392.1 416 53.8
Carub.0005s2135 Capsella rubella HOM05D003892 ORTHO05D004522 7.0e-107 391.7 407 52.1
MELO3C009588.2 Cucumis melo HOM05D003892 ORTHO05D004522 7.0e-107 391.7 409 54.3
AL5G35820 Arabidopsis lyrata HOM05D003892 ORTHO05D004522 9.1e-107 391.3 413 50.8
Aa31LG11G3840 Aethionema arabicum HOM05D003892 ORTHO05D004522 3.5e-106 389.4 410 53.7
EL10Ac5g11803 Beta vulgaris HOM05D003892 ORTHO05D004522 3.5e-106 389.4 400 54.5
Glyma.03G205000 Glycine max HOM05D003892 ORTHO05D004522 3.5e-106 389.4 412 55.1
Lsat_1_v5_gn_6_34240 Lactuca sativa HOM05D003892 ORTHO05D004522 4.5e-106 389.0 401 54.9
A09p47680 Brassica napus HOM05D003892 ORTHO05D004522 5.9e-106 388.7 409 51.1
BraA09t40224Z Brassica rapa HOM05D003892 ORTHO05D004522 5.9e-106 388.7 409 51.1
AUR62036307 Chenopodium quinoa HOM05D003892 ORTHO05D004522 7.7e-106 388.3 418 53.6
arahy.Tifrunner.gnm1.ann1.H4389H Arachis hypogaea HOM05D003892 ORTHO05D004522 1.0e-105 387.9 446 52.0
Phvul.001G198500 Phaseolus vulgaris HOM05D003892 ORTHO05D004522 3.8e-105 386.0 411 54.7
Aqoxy1G00583 Aquilegia oxysepala HOM05D003892 ORTHO05D004522 6.6e-105 385.2 421 52.7
VMungo1383G0340 Vigna mungo HOM05D003892 ORTHO05D004522 8.6e-105 384.8 409 54.8
BcaB01g00163 Brassica carinata HOM05D003892 ORTHO05D004522 1.1e-104 384.4 409 51.8
PSO210G1032 Papaver somniferum HOM05D003892 ORTHO05D004522 1.5e-104 384.0 419 51.8
CARHR164690 Cardamine hirsuta HOM05D003892 ORTHO05D004522 1.9e-104 383.6 417 50.8
Peaxi162Scf00210g00093 Petunia axillaris HOM05D003892 ORTHO05D004522 1.9e-104 383.6 412 51.9
Peaxi162Scf00751g00063 Petunia axillaris HOM05D003892 ORTHO05D004522 1.9e-104 383.6 412 51.9
PSO832G2838 Papaver somniferum HOM05D003892 ORTHO05D004522 1.6e-103 380.6 421 51.5
MBI11_g43834_MAGBIO Magnolia biondii HOM05D003892 ORTHO05D004522 2.1e-103 380.2 417 52.8
PGR004G2391 Punica granatum HOM05D003892 ORTHO05D004522 2.8e-103 379.8 408 52.2
MSTRG.5909 Avicennia marina HOM05D003892 ORTHO05D004522 5.2e-102 375.6 403 53.3
arahy.Tifrunner.gnm1.ann1.L9LT45 Arachis hypogaea HOM05D003892 ORTHO05D004522 6.8e-102 375.2 459 50.5
Sed0022353 Sechium edule HOM05D003892 ORTHO05D004522 4.4e-101 372.5 412 52.2
Ca_09081_v3 Cicer arietinum L. HOM05D003892 ORTHO05D004522 1.3e-100 370.9 418 52.9
FAN05G2923 Fragaria x ananassa HOM05D003892 ORTHO05D004522 1.7e-100 370.5 416 51.9
BcaC07g39789 Brassica carinata HOM05D003892 ORTHO05D004522 5.4e-99 365.5 406 50.7
BolC8t50600H Brassica oleracea HOM05D003892 ORTHO05D004522 1.2e-98 364.4 406 50.5
Medtr7g106900 Medicago truncatula HOM05D003892 ORTHO05D004522 1.6e-98 364.0 418 51.2
C08p29890 Brassica napus HOM05D003892 ORTHO05D004522 4.5e-98 362.5 406 51.0
Migut.J00728 Erythranthe guttata HOM05D003892 ORTHO05D004522 1.7e-97 360.5 414 51.0
RcHm_v2.0_Chr3g0477411 Rosa chinensis HOM05D003892 ORTHO05D004522 2.3e-97 360.1 406 52.7
A04p05070 Brassica napus HOM05D003892 ORTHO05D004522 5.0e-97 359.0 400 50.2
BcaB02g08458 Brassica carinata HOM05D003892 ORTHO05D004522 8.6e-97 358.2 400 50.5
FvH4_6g21040 Fragaria vesca HOM05D003892 ORTHO05D004522 1.1e-96 357.8 416 51.0
SGA_v2.0_scaffold112G31566 Striga asiatica HOM05D003892 ORTHO05D004522 2.5e-96 356.7 413 50.1
TPR.G34451 Trifolium pratense HOM05D003892 ORTHO05D004522 4.3e-96 355.9 418 50.2
SalBow1G1519 Salvia bowleyana HOM05D003892 ORTHO05D004522 5.6e-96 355.5 417 51.3
SalBow1G7123 Salvia bowleyana HOM05D003892 ORTHO05D004522 5.6e-96 355.5 417 51.3
FAN02G1525 Fragaria x ananassa HOM05D003892 ORTHO05D004522 1.6e-95 354.0 416 50.5
Psat3g027080 Pisum sativum HOM05D003892 ORTHO05D004522 1.6e-95 354.0 418 50.5
BraA04t16218Z Brassica rapa HOM05D003892 ORTHO05D004522 3.6e-95 352.8 400 49.8
Lj6g0017825 Lotus japonicus HOM05D003892 ORTHO05D004522 1.0e-94 351.3 409 51.6
ECA238G3852 Erigeron canadensis HOM05D003892 ORTHO05D004522 1.5e-93 347.4 419 49.6
Ah.12g059580 Amaranthus hybridus HOM05D003892 ORTHO05D004522 2.0e-93 347.1 404 51.0
FAN05G3327 Fragaria x ananassa HOM05D003892 ORTHO05D004522 2.0e-93 347.1 447 47.9
Lsat_1_v5_gn_2_121661 Lactuca sativa HOM05D003892 ORTHO05D004522 1.3e-92 344.4 418 51.4
FAN14G4612 Fragaria x ananassa HOM05D003892 ORTHO05D004522 2.2e-92 343.6 449 47.7
BcaC02g09701 Brassica carinata HOM05D003892 ORTHO05D004522 6.4e-92 342.0 400 49.0
CDE07G1113 Ceratophyllum demersum HOM05D003892 ORTHO05D004522 8.3e-92 341.7 432 47.7
C04p37570 Brassica napus HOM05D003892 ORTHO05D004522 3.2e-91 339.7 400 48.8
SGA_v2.0_scaffold31G12827 Striga asiatica HOM05D003892 ORTHO05D004522 4.1e-91 339.3 410 48.5
HPP92_013933 Vanilla planifolia HOM05D003892 ORTHO05D004522 4.1e-91 339.3 411 47.9
Nitab4.5_0000300g0030 Nicotiana tabacum HOM05D003892 ORTHO05D004522 2.7e-90 336.7 381 50.9
TAR636G2427 Trochodendron aralioides HOM05D003892 ORTHO05D004522 6.2e-87 325.5 227 72.2
ATR0580G241 Amborella trichopoda HOM05D003892 ORTHO05D004522 4.4e-85 319.3 418 45.7
Os12g0621700 Oryza sativa ssp. japonica HOM05D003892 ORTHO05D004522 1.7e-84 317.4 413 48.2
arahy.Tifrunner.gnm1.ann1.P5VIE6 Arachis hypogaea HOM05D003892 ORTHO05D004522 2.2e-84 317.0 419 48.0
Aa31LG2G20030 Aethionema arabicum HOM05D003892 ORTHO05D004522 1.9e-83 313.9 389 47.6
Zm00001eb032200 Zea mays HOM05D003892 ORTHO05D004522 6.6e-81 305.4 411 46.0
Cpa.g.sc222.13 Carica papaya HOM05D003892 ORTHO05D004522 2.9e-76 290.0 409 44.7
Sed0005279 Sechium edule HOM05D000521 ORTHO05D004522 4.1e-75 286.2 338 50.3
Sed0022528 Sechium edule HOM05D003892 ORTHO05D004522 2.5e-72 276.9 413 45.0
Gohir.D07G211433 Gossypium hirsutum HOM05D003892 ORTHO05D004522 2.0e-69 267.3 345 49.0
Nitab4.5_0000429g0010 Nicotiana tabacum HOM05D003892 ORTHO05D004522 2.0e-69 267.3 336 46.7
arahy.Tifrunner.gnm1.ann1.75SLRD Arachis hypogaea HOM05D003892 ORTHO05D004522 1.0e-65 255.0 261 55.9
Actinidia37779 Actinidia chinensis HOM05D003892 ORTHO05D004522 3.0e-57 226.9 141 78.7
Gohir.A04G055942 Gossypium hirsutum HOM05D003892 ORTHO05D004522 1.6e-55 221.1 156 71.2
Medtr7g029625 Medicago truncatula HOM05D003892 ORTHO05D004522 3.1e-54 216.9 329 43.2
vmacro07512 Vaccinium macrocarpon HOM05D003892 ORTHO05D004522 1.9e-51 207.6 201 59.2
SMO351G0585 Selaginella moellendorffii HOM05D003892 ORTHO05D004522 2.4e-51 207.2 384 37.5
Pp3c26_8020 Physcomitrium patens HOM05D003892 ORTHO05D004522 2.1e-47 194.1 446 31.2
SHI28320 Sapria himalayana HOM05D003892 ORTHO05D004522 1.8e-46 191.0 412 33.7
Actinidia37778 Actinidia chinensis HOM05D003892 ORTHO05D004522 1.4e-43 181.4 170 60.6
AagrBONN_evm.TU.Sc2ySwM_228.3493 Anthoceros agrestis HOM05D003892 ORTHO05D004522 2.7e-42 177.2 253 40.7
Gohir.A04G055921 Gossypium hirsutum HOM05D003892 ORTHO05D004522 2.7e-42 177.2 198 51.5
Pp3c4_31220 Physcomitrium patens HOM05D003892 ORTHO05D004522 1.0e-41 175.3 262 40.1
arahy.Tifrunner.gnm1.ann1.84GXZP Arachis hypogaea HOM05D003892 ORTHO05D004522 4.3e-40 169.9 266 43.2
Mapoly0011s0047 Marchantia polymorpha HOM05D003892 ORTHO05D004522 4.8e-39 166.4 414 32.1
arahy.Tifrunner.gnm1.ann1.C1NY7P Arachis hypogaea HOM05D003892 ORTHO05D004522 1.1e-38 165.2 274 41.2
arahy.Tifrunner.gnm1.ann1.R2HNIM Arachis hypogaea HOM05D003892 ORTHO05D004522 4.0e-38 163.3 287 40.8
Nitab4.5_0003430g0040 Nicotiana tabacum HOM05D003892 ORTHO05D004522 9.0e-38 162.2 195 46.2
vmacro07513 Vaccinium macrocarpon HOM05D003892 ORTHO05D004522 6.1e-34 149.4 224 46.4
Aqoxy2G02169 Aquilegia oxysepala HOM05D001785 ORTHO05D001933 3.3e-32 143.7 202 45.5
HPP92_012152 Vanilla planifolia HOM05D003892 ORTHO05D004522 5.7e-32 142.9 137 53.3
TAR636G1189 Trochodendron aralioides HOM05D003892 ORTHO05D004522 8.5e-28 129.0 146 49.3
CBR_g20103 Chara braunii HOM05D003892 ORTHO05D004522 9.7e-24 115.5 214 34.6
arahy.Tifrunner.gnm1.ann1.Z2YKN3 Arachis hypogaea HOM05D003892 ORTHO05D004522 3.7e-23 113.6 224 37.9
arahy.Tifrunner.gnm1.ann1.U7JCXR Arachis hypogaea HOM05D003892 ORTHO05D004522 8.2e-23 112.5 188 41.5
GSVIVG01020966001 Vitis vinifera HOM05D003892 ORTHO05D004522 1.4e-22 111.7 66 80.3
GSVIVG01020973001 Vitis vinifera HOM05D003892 ORTHO05D004522 1.8e-22 111.3 66 81.8
CSS0016552 Camellia sinensis var. sinensis HOM05D003892 ORTHO05D004522 8.5e-20 102.4 62 80.6
unitig_26.g9151 Utricularia gibba HOM05D003892 ORTHO05D004522 5.5e-19 99.8 77 63.6
SEGI_25684 Sequoiadendron giganteum HOM05D003892 ORTHO05D004522 7.2e-19 99.4 218 34.4
SEGI_30208 Sequoiadendron giganteum HOM05D003892 ORTHO05D004522 1.6e-18 98.2 84 58.3
unitig_749.g14208 Utricularia gibba HOM05D003892 ORTHO05D004522 3.6e-18 97.1 71 66.2
arahy.Tifrunner.gnm1.ann1.RB1WVK Arachis hypogaea HOM05D003892 ORTHO05D004522 1.1e-14 85.5 157 39.5
Cre03.g197600 Chlamydomonas reinhardtii HOM05D003892 ORTHO05D004522 3.6e-10 70.5 156 35.9
Cfa017831 Carpinus fangiana HOM05D003892 ORTHO05D004522 8.8e-09 65.9 38 73.7
ATR1154G039 Amborella trichopoda HOM05D003892 ORTHO05D004522 4.4e-08 63.5 158 32.3
Glyma.10G214400 Glycine max HOM05D003892 ORTHO05D004522 1.1e-06 58.9 35 77.1


User provided reference genes

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