Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv11885 Davidia involucrata HOM05D001890 ORTHO05D008163 4.7e-149 531.2 271 100.0
Actinidia03972 Actinidia chinensis HOM05D001890 ORTHO05D008163 1.2e-99 367.1 274 71.5
Actinidia03864 Actinidia chinensis HOM05D001890 ORTHO05D008163 3.8e-98 362.1 275 70.5
GSVIVG01022555001 Vitis vinifera HOM05D001890 ORTHO05D008163 1.1e-86 323.9 275 65.5
Haze_20108 Corylus avellana HOM05D001890 ORTHO05D008163 2.8e-85 319.3 267 66.3
Atru.chr8.1300 Acer truncatum HOM05D001890 ORTHO05D008163 1.8e-84 316.6 272 63.6
QL07p026864 Quercus lobata HOM05D001890 ORTHO05D008163 1.8e-84 316.6 277 65.0
Prupe.7G091100 Prunus persica HOM05D001890 ORTHO05D008163 2.4e-84 316.2 266 65.0
Ciclev10012448m.g Citrus clementina HOM05D001890 ORTHO05D008163 7.0e-84 314.7 270 63.7
Thecc.05G108500 Theobroma cacao HOM05D001890 ORTHO05D008163 5.9e-83 311.6 272 65.8
TAR369G0922 Trochodendron aralioides HOM05D001890 ORTHO05D008163 7.7e-83 311.2 262 65.3
Manes.08G036100 Manihot esculenta HOM05D001890 ORTHO05D008163 6.5e-82 308.1 222 69.8
HanXRQChr02g0053101 Helianthus annuus HOM05D001890 ORTHO05D008163 1.2e-80 303.9 276 58.3
Rhsim03G0062200 Rhododendron simsii HOM05D001890 ORTHO05D008163 1.6e-80 303.5 279 62.7
CANSAT64G1416 Cannabis sativa HOM05D001890 ORTHO05D008163 2.1e-80 303.1 268 61.9
Gorai.002G233900 Gossypium raimondii HOM05D001890 ORTHO05D008163 2.1e-80 303.1 271 63.8
Lalb_Chr06g0173221 Lupinus albus HOM05D001890 ORTHO05D008163 4.7e-80 302.0 281 60.5
TWI74G0853 Tripterygium wilfordii HOM05D001890 ORTHO05D008163 4.7e-80 302.0 263 63.9
Dinv25069 Davidia involucrata HOM05D001890 ORTHO05D003442 8.0e-80 301.2 209 76.1
MD12G1044000 Malus domestica HOM05D001890 ORTHO05D008163 1.0e-79 300.8 265 62.3
MELO3C009561.2 Cucumis melo HOM05D001890 ORTHO05D008163 2.3e-79 299.7 274 61.3
Hma1.2p1_2851F.1_g329460 Hydrangea macrophylla HOM05D001890 ORTHO05D008163 3.0e-79 299.3 178 85.4
Cc06_g06850 Coffea canephora HOM05D001890 ORTHO05D008163 3.9e-79 298.9 259 63.7
CsaV3_3G038180 Cucumis sativus L. HOM05D001890 ORTHO05D008163 5.2e-79 298.5 272 61.8
DCAR_013451 Daucus carota HOM05D001890 ORTHO05D008163 6.7e-79 298.1 273 62.6
Gohir.D01G190200 Gossypium hirsutum HOM05D001890 ORTHO05D008163 6.7e-79 298.1 270 64.1
CiPaw.09G022900 Carya illinoinensis HOM05D001890 ORTHO05D008163 2.0e-78 296.6 263 63.1
Gohir.A01G200100 Gossypium hirsutum HOM05D001890 ORTHO05D008163 4.4e-78 295.4 271 62.4
MD14G1043000 Malus domestica HOM05D001890 ORTHO05D008163 4.4e-78 295.4 265 62.3
Nn2g14391 Nelumbo nucifera HOM05D001890 ORTHO05D008163 7.4e-78 294.7 262 61.8
Lsat_1_v5_gn_6_34681 Lactuca sativa HOM05D001890 ORTHO05D008163 9.7e-78 294.3 266 59.0
RcHm_v2.0_Chr3g0476781 Rosa chinensis HOM05D001890 ORTHO05D008163 9.7e-78 294.3 277 60.3
Aqoxy1G01947 Aquilegia oxysepala HOM05D001890 ORTHO05D008163 1.3e-77 293.9 257 62.3
Potri.006G200900 Populus trichocarpa HOM05D001890 ORTHO05D008163 2.4e-76 289.7 277 58.8
Sed0014416 Sechium edule HOM05D001890 ORTHO05D008163 2.4e-76 289.7 203 72.9
FAN05G2088 Fragaria x ananassa HOM05D001890 ORTHO05D008163 5.3e-76 288.5 270 58.9
COL.COLO4_29517 Corchorus olitorius HOM05D001890 ORTHO05D008163 7.0e-76 288.1 271 62.4
Eucgr.A02558 Eucalyptus grandis HOM05D001890 ORTHO05D008163 4.5e-75 285.4 281 59.1
Glyma.10G083800 Glycine max HOM05D001890 ORTHO05D008163 5.9e-75 285.0 265 58.1
FAN14G3769 Fragaria x ananassa HOM05D001890 ORTHO05D008163 1.0e-74 284.3 272 58.1
FAN09G2968 Fragaria x ananassa HOM05D001890 ORTHO05D008163 1.3e-74 283.9 196 71.4
PSO170G4460 Papaver somniferum HOM05D001890 ORTHO05D008163 1.3e-74 283.9 262 60.3
arahy.Tifrunner.gnm1.ann1.59XBIZ Arachis hypogaea HOM05D001890 ORTHO05D008163 2.9e-74 282.7 273 57.9
MSTRG.19331 Avicennia marina HOM05D001890 ORTHO05D008163 5.0e-74 282.0 300 54.0
Sabra06G0154600 Salix brachista HOM05D001890 ORTHO05D008163 6.5e-74 281.6 216 67.1
PGSC0003DMG400021337 Solanum tuberosum HOM05D001890 ORTHO05D008163 6.5e-74 281.6 273 60.1
TPR.G21244 Trifolium pratense HOM05D001890 ORTHO05D003442 1.5e-73 280.4 205 67.3
FvH4_6g20780 Fragaria vesca HOM05D001890 ORTHO05D008163 1.9e-73 280.0 273 57.9
Aa31LG5G17190 Aethionema arabicum HOM05D001890 ORTHO05D008163 2.5e-73 279.6 267 54.3
Oeu045017.1 Olea europaea HOM05D001890 ORTHO05D008163 4.2e-73 278.9 291 56.7
arahy.Tifrunner.gnm1.ann1.XW59SW Arachis hypogaea HOM05D001890 ORTHO05D008163 5.5e-73 278.5 278 57.6
MBI05_g37895_MAGBIO Magnolia biondii HOM05D001890 ORTHO05D008163 5.5e-73 278.5 263 59.3
CARHR207150 Cardamine hirsuta HOM05D001890 ORTHO05D008163 7.2e-73 278.1 213 65.3
Migut.J00743 Erythranthe guttata HOM05D001890 ORTHO05D008163 7.2e-73 278.1 300 54.7
Sopen01g002850 Solanum pennellii HOM05D001890 ORTHO05D008163 7.2e-73 278.1 247 63.2
Nitab4.5_0009788g0030 Nicotiana tabacum HOM05D001890 ORTHO05D008163 9.4e-73 277.7 244 62.3
Solyc01g006860.3 Solanum lycopersicum HOM05D001890 ORTHO05D008163 1.2e-72 277.3 273 59.7
ECA233G0010 Erigeron canadensis HOM05D001890 ORTHO05D008163 3.6e-72 275.8 280 56.4
Lj5g0002159 Lotus japonicus HOM05D001890 ORTHO05D008163 1.0e-71 274.2 274 55.5
vmacro07500 Vaccinium macrocarpon HOM05D001890 ORTHO05D008163 1.8e-71 273.5 292 57.9
AL6G16500 Arabidopsis lyrata HOM05D001890 ORTHO05D008163 3.0e-71 272.7 269 56.5
AT5G06410 Arabidopsis thaliana HOM05D001890 ORTHO05D008163 3.0e-71 272.7 266 57.1
Glyma.02G193000 Glycine max HOM05D001890 ORTHO05D008163 6.7e-71 271.6 279 55.9
Nitab4.5_0005218g0010 Nicotiana tabacum HOM05D001890 ORTHO05D008163 1.5e-70 270.4 277 58.1
EL10Ac5g11823 Beta vulgaris HOM05D001890 ORTHO05D008163 3.3e-70 269.2 271 57.9
PSO407G0155 Papaver somniferum HOM05D001890 ORTHO05D008163 5.7e-70 268.5 262 58.4
Thhalv10014422m.g Eutrema salsugineum HOM05D001890 ORTHO05D008163 7.5e-70 268.1 202 64.9
THA.LOC104816627 Tarenaya hassleriana HOM05D001890 ORTHO05D008163 7.5e-70 268.1 267 57.3
Oeu020166.1 Olea europaea HOM05D001890 ORTHO05D008163 1.7e-69 266.9 254 57.9
SGA_v2.0_scaffold18G08441 Striga asiatica HOM05D001890 ORTHO05D008163 3.7e-69 265.8 291 52.6
VMungo0251G0199 Vigna mungo HOM05D001890 ORTHO05D008163 6.3e-69 265.0 222 60.4
BcaB01g05992 Brassica carinata HOM05D001890 ORTHO05D008163 2.4e-68 263.1 268 52.2
BolC3t12860H Brassica oleracea HOM05D001890 ORTHO05D003442 2.4e-68 263.1 204 63.2
Medtr1g055300 Medicago truncatula HOM05D001890 ORTHO05D008163 2.4e-68 263.1 195 64.6
Phvul.007G266300 Phaseolus vulgaris HOM05D001890 ORTHO05D008163 4.1e-68 262.3 264 54.5
BraA03t09635Z Brassica rapa HOM05D001890 ORTHO05D008163 1.6e-67 260.4 203 62.6
C03p03150 Brassica napus HOM05D001890 ORTHO05D003442 3.5e-67 259.2 268 51.9
CAN.G911.27 Capsicum annuum HOM05D001890 ORTHO05D008163 4.5e-67 258.8 283 55.8
SHI39226 Sapria himalayana HOM05D001890 ORTHO05D008163 4.5e-67 258.8 211 60.7
A03p02720 Brassica napus HOM05D001890 ORTHO05D008163 5.9e-67 258.5 204 62.3
unitig_578.g15805 Utricularia gibba HOM05D001890 ORTHO05D008163 4.2e-65 252.3 285 51.2
ClCG10G018120 Citrullus lanatus HOM05D001890 ORTHO05D008163 7.2e-65 251.5 272 55.1
PGR004G2365 Punica granatum HOM05D001890 ORTHO05D008163 9.4e-65 251.1 276 55.4
BraA10t45037Z Brassica rapa HOM05D001890 ORTHO05D008163 1.6e-64 250.4 267 52.4
ATR0697G265 Amborella trichopoda HOM05D001890 ORTHO05D008163 2.7e-64 249.6 260 53.8
SGA_v2.0_scaffold116G32259 Striga asiatica HOM05D001890 ORTHO05D008163 3.6e-64 249.2 317 48.3
BolC9t59784H Brassica oleracea HOM05D001890 ORTHO05D008163 6.1e-64 248.4 266 52.3
Ah.12g054380 Amaranthus hybridus HOM05D001890 ORTHO05D008163 2.3e-63 246.5 202 63.9
CSS0004156 Camellia sinensis var. sinensis HOM05D001890 ORTHO05D008163 5.2e-63 245.4 154 85.1
HPP92_018252 Vanilla planifolia HOM05D001890 ORTHO05D008163 3.4e-62 242.7 284 49.6
RcHm_v2.0_Chr3g0476751 Rosa chinensis HOM05D001890 ORTHO05D008163 1.1e-60 237.7 280 53.9
Zm00001eb161520 Zea mays HOM05D001890 ORTHO05D008163 2.0e-59 233.4 217 58.1
Actinidia37766 Actinidia chinensis HOM05D001890 ORTHO05D008163 5.0e-58 228.8 189 65.6
FAN02G4586 Fragaria x ananassa HOM05D001890 ORTHO05D003442 2.5e-57 226.5 209 60.3
Psat6g128200 Pisum sativum HOM05D001890 ORTHO05D008163 2.1e-56 223.4 290 46.9
Lj3C241T9 Lonicera japonica HOM05D001890 ORTHO05D008163 4.0e-55 219.2 210 60.0
Sc22g0003100 Simmondsia chinensis HOM05D001890 ORTHO05D008163 8.9e-55 218.0 153 75.2
Os12g0456200 Oryza sativa ssp. japonica HOM05D001890 ORTHO05D008163 4.4e-54 215.7 167 64.7
AUR62036336 Chenopodium quinoa HOM05D001890 ORTHO05D008163 2.4e-52 209.9 154 70.1
SEGI_25149 Sequoiadendron giganteum HOM05D001890 ORTHO05D008163 3.1e-52 209.5 191 53.4
Hma1.2p1_2851F.1_g329450 Hydrangea macrophylla HOM05D001890 ORTHO05D008163 1.6e-51 207.2 283 51.6
FAN05G2830 Fragaria x ananassa HOM05D001890 ORTHO05D008163 3.5e-51 206.1 144 72.9
Cpa.g.sc104.2 Carica papaya HOM05D001890 ORTHO05D008163 3.8e-50 202.6 174 63.2
Hund10835 Selenicereus undatus HOM05D001890 ORTHO05D008163 8.6e-50 201.4 177 61.6
CDE06G1636 Ceratophyllum demersum HOM05D001890 ORTHO05D000511 4.7e-48 195.7 275 45.1
Psat2g142840 Pisum sativum HOM05D001890 ORTHO05D008163 3.4e-46 189.5 146 61.6
AagrBONN_evm.TU.Sc2ySwM_117.1093 Anthoceros agrestis HOM05D001890 ORTHO05D008163 4.9e-45 185.7 206 46.1
Sp6g36440 Schrenkiella parvula HOM05D001890 ORTHO05D008163 1.4e-44 184.1 203 48.3
Pp3c16_9340 Physcomitrium patens HOM05D001890 ORTHO05D008163 2.3e-42 176.8 204 45.6
AUR62030695 Chenopodium quinoa HOM05D001890 ORTHO05D008163 6.4e-37 158.7 113 70.8
CBR_g70174 Chara braunii HOM05D001890 ORTHO05D008163 3.0e-34 149.8 219 39.7
Mapoly0055s0040 Marchantia polymorpha HOM05D001890 ORTHO05D008163 8.6e-34 148.3 191 41.9
Psat1g223560 Pisum sativum HOM05D001890 ORTHO05D008163 3.6e-24 116.3 118 48.3
Cre11.g467718 Chlamydomonas reinhardtii HOM05D001890 ORTHO05D008163 8.1e-24 115.2 198 37.4
Cre12.g507559 Chlamydomonas reinhardtii HOM05D001890 ORTHO05D008163 8.1e-24 115.2 198 37.4
Peaxi162Scf00675g00610 Petunia axillaris HOM05D001890 ORTHO05D008163 8.9e-23 111.7 112 56.2
Lj3C241T8 Lonicera japonica HOM05D001890 ORTHO05D008163 8.4e-21 105.1 121 51.2
Lj1g0015991 Lotus japonicus HOM05D001890 ORTHO05D008163 1.4e-20 104.4 81 66.7
SMO353G0218 Selaginella moellendorffii HOM05D001890 ORTHO05D008163 2.7e-19 100.1 123 40.7
Peaxi162Scf00675g00611 Petunia axillaris HOM05D001890 ORTHO05D008163 1.5e-17 94.4 100 56.0
Lalb_Chr25g0282121 Lupinus albus HOM05D001890 ORTHO05D008163 1.1e-15 88.2 105 48.6
MCO10G285 Micromonas commoda HOM05D001890 ORTHO05D008163 4.4e-14 82.8 228 27.6
Peaxi162Scf00767g00522 Petunia axillaris HOM05D001890 ORTHO05D008163 1.9e-12 77.4 260 30.0
CBR_g31284 Chara braunii HOM05D001890 ORTHO05D008163 2.4e-12 77.0 154 33.8
SalBow1G6520 Salvia bowleyana HOM05D001890 ORTHO05D008163 9.0e-07 58.5 96 40.6


User provided reference genes

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