Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv11828 Davidia involucrata HOM05D001603 ORTHO05D001393 1.0e-81 306.6 149 100.0
Dinv11829 Davidia involucrata HOM05D001603 ORTHO05D001393 5.7e-56 221.1 109 96.3
Dinv11830 Davidia involucrata HOM05D001603 ORTHO05D001393 5.7e-56 221.1 109 96.3
Dinv11832 Davidia involucrata HOM05D001603 ORTHO05D001393 6.4e-55 217.6 109 94.5
Dinv11831 Davidia involucrata HOM05D001603 ORTHO05D001393 1.1e-49 200.3 103 92.2
Dinv11833 Davidia involucrata HOM05D001603 ORTHO05D001393 1.2e-26 123.6 145 47.6
Thecc.09G136800 Theobroma cacao HOM05D001603 ORTHO05D001393 9.9e-16 87.4 110 41.8
Aqoxy6G02756 Aquilegia oxysepala HOM05D001603 ORTHO05D001393 1.4e-14 83.6 107 38.3
Thecc.09G136900 Theobroma cacao HOM05D001603 ORTHO05D001393 1.4e-14 83.6 106 40.6
Aqoxy6G02757 Aquilegia oxysepala HOM05D001603 ORTHO05D001393 3.2e-14 82.4 119 39.5
Duzib187G1932 Durio zibethinus HOM05D001603 ORTHO05D001393 5.4e-14 81.6 110 39.1
Duzib187G1233 Durio zibethinus HOM05D001603 ORTHO05D001393 2.1e-13 79.7 103 40.8
Gorai.004G109100 Gossypium raimondii HOM05D001603 ORTHO05D001393 2.7e-13 79.3 107 38.3
Carub.0004s0795 Capsella rubella HOM05D001603 ORTHO05D001393 3.5e-13 79.0 108 38.0
Gorai.N025500 Gossypium raimondii HOM05D001603 ORTHO05D001393 6.0e-13 78.2 107 38.3
Thhalv10005546m.g Eutrema salsugineum HOM05D001603 ORTHO05D001393 7.9e-13 77.8 108 37.0
Gohir.D13G021050 Gossypium hirsutum HOM05D001603 ORTHO05D001393 7.9e-13 77.8 107 39.3
AT2G14378 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 1.0e-12 77.4 108 38.0
AT2G27315 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 1.8e-12 76.6 107 35.5
FAN06G4924 Fragaria x ananassa HOM05D001603 ORTHO05D001393 1.8e-12 76.6 102 36.3
CiPaw.03G252200 Carya illinoinensis HOM05D001603 ORTHO05D001393 3.0e-12 75.9 78 39.7
COL.COLO4_33371 Corchorus olitorius HOM05D001603 ORTHO05D001393 3.0e-12 75.9 79 40.5
Gohir.D08G101100 Gossypium hirsutum HOM05D001603 ORTHO05D001393 3.9e-12 75.5 107 36.4
Atru.chr7.1960 Acer truncatum HOM05D001603 ORTHO05D001393 5.1e-12 75.1 104 36.5
Atru.chr7.2004 Acer truncatum HOM05D001603 ORTHO05D001393 5.1e-12 75.1 133 34.6
AT4G35165 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 5.1e-12 75.1 108 37.0
CARHR277370 Cardamine hirsuta HOM05D001603 ORTHO05D001393 6.7e-12 74.7 103 32.0
AL8G27490 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 8.7e-12 74.3 109 35.8
Gohir.A13G020450 Gossypium hirsutum HOM05D001603 ORTHO05D001393 8.7e-12 74.3 107 37.4
Lj7A438G59 Lonicera japonica HOM05D001603 ORTHO05D001393 8.7e-12 74.3 109 35.8
Atru.chr11.1201 Acer truncatum HOM05D001603 ORTHO05D001393 1.1e-11 73.9 114 34.2
Atru.chr7.1961 Acer truncatum HOM05D001603 ORTHO05D001393 1.9e-11 73.2 104 35.6
BcaB01g04253 Brassica carinata HOM05D001603 ORTHO05D001393 1.9e-11 73.2 105 33.3
CARHR181490 Cardamine hirsuta HOM05D001603 ORTHO05D001393 1.9e-11 73.2 107 35.5
Thhalv10005396m.g Eutrema salsugineum HOM05D001603 ORTHO05D001393 1.9e-11 73.2 108 35.2
TWI63G0036 Tripterygium wilfordii HOM05D001603 ORTHO05D001393 2.5e-11 72.8 86 37.2
AL7G16040 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 3.3e-11 72.4 108 35.2
CARHR265940 Cardamine hirsuta HOM05D001603 ORTHO05D001393 3.3e-11 72.4 106 36.8
Carub.0008s2423 Capsella rubella HOM05D001603 ORTHO05D001393 4.3e-11 72.0 109 35.8
AL4G21270 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 5.6e-11 71.6 107 35.5
AL5G28100 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 5.6e-11 71.6 106 33.0
Nn2g12175 Nelumbo nucifera HOM05D001603 ORTHO05D001393 5.6e-11 71.6 106 37.7
AT3G42565 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 7.4e-11 71.2 102 39.2
Gorai.004G109000 Gossypium raimondii HOM05D001603 ORTHO05D001393 7.4e-11 71.2 139 32.4
Rhsim01G0055000 Rhododendron simsii HOM05D001603 ORTHO05D001393 7.4e-11 71.2 97 33.0
BcaC01g06264 Brassica carinata HOM05D001603 ORTHO05D001393 9.6e-11 70.9 105 31.4
C03p17510 Brassica napus HOM05D001603 ORTHO05D001393 9.6e-11 70.9 105 31.4
Carub.0008s1315 Capsella rubella HOM05D001603 ORTHO05D001393 9.6e-11 70.9 68 41.2
Sp6g15130 Schrenkiella parvula HOM05D001603 ORTHO05D001393 9.6e-11 70.9 105 34.3
BolC3t14164H Brassica oleracea HOM05D001603 ORTHO05D001393 1.6e-10 70.1 105 31.4
CARHR119910 Cardamine hirsuta HOM05D001603 ORTHO05D001393 1.6e-10 70.1 108 35.2
Carub.0008s1317 Capsella rubella HOM05D001603 ORTHO05D001393 2.1e-10 69.7 106 33.0
CARHR243480 Cardamine hirsuta HOM05D001603 ORTHO05D001393 2.1e-10 69.7 107 34.6
TWI34G1530 Tripterygium wilfordii HOM05D001603 ORTHO05D001393 2.1e-10 69.7 70 44.3
A03p15020 Brassica napus HOM05D001603 ORTHO05D001393 2.8e-10 69.3 105 31.4
BraA03t10796Z Brassica rapa HOM05D001603 ORTHO05D001393 2.8e-10 69.3 105 31.4
Gohir.D08G101050 Gossypium hirsutum HOM05D001603 ORTHO05D001393 2.8e-10 69.3 139 32.4
Sp6g09890 Schrenkiella parvula HOM05D001603 ORTHO05D001393 2.8e-10 69.3 67 40.3
Gorai.013G023500 Gossypium raimondii HOM05D001603 ORTHO05D001393 3.7e-10 68.9 93 37.6
AT5G36500 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 4.8e-10 68.6 108 36.1
A02p42790 Brassica napus HOM05D001603 ORTHO05D001393 4.8e-10 68.6 66 39.4
BraA02t09205Z Brassica rapa HOM05D001603 ORTHO05D001393 4.8e-10 68.6 66 39.4
AT5G36490 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 6.2e-10 68.2 108 36.1
AT5G36658 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 6.2e-10 68.2 101 39.6
Lj7C438T17 Lonicera japonica HOM05D001603 ORTHO05D001393 6.2e-10 68.2 113 32.7
AT5G36350 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 8.1e-10 67.8 108 36.1
AT5G36360 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 8.1e-10 67.8 108 36.1
AT5G36380 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 8.1e-10 67.8 108 36.1
AT5G36390 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 8.1e-10 67.8 108 36.1
AT5G36400 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 8.1e-10 67.8 108 36.1
AT5G36410 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 8.1e-10 67.8 108 36.1
AT5G36420 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 8.1e-10 67.8 108 36.1
AT5G36430 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 8.1e-10 67.8 108 36.1
AT5G36440 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 8.1e-10 67.8 108 36.1
AT5G36450 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 8.1e-10 67.8 108 36.1
AT5G36460 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 8.1e-10 67.8 108 36.1
AT5G36470 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 8.1e-10 67.8 108 36.1
AT5G36520 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 8.1e-10 67.8 108 36.1
Carub.0008s0802 Capsella rubella HOM05D001603 ORTHO05D001393 8.1e-10 67.8 66 39.4
Carub.0008s1450 Capsella rubella HOM05D001603 ORTHO05D001393 8.1e-10 67.8 67 37.3
AT5G36370 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 1.1e-09 67.4 107 36.4
Sc18g0000140 Simmondsia chinensis HOM05D001603 ORTHO05D001393 1.1e-09 67.4 75 38.7
TWI34G1934 Tripterygium wilfordii HOM05D001603 ORTHO05D001393 1.1e-09 67.4 63 46.0
BcaC03g18210 Brassica carinata HOM05D001603 ORTHO05D001393 1.4e-09 67.0 66 39.4
CARHR256980 Cardamine hirsuta HOM05D001603 ORTHO05D001393 1.8e-09 66.6 112 33.0
CARHR266380 Cardamine hirsuta HOM05D001603 ORTHO05D001393 1.8e-09 66.6 101 34.7
AT5G42895 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 2.4e-09 66.2 67 44.8
RcHm_v2.0_Chr2g0149601 Rosa chinensis HOM05D001603 ORTHO05D001393 2.4e-09 66.2 67 41.8
AT5G36657 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 3.1e-09 65.9 67 46.3
BcaC02g08400 Brassica carinata HOM05D001603 ORTHO05D001393 3.1e-09 65.9 107 31.8
BcaC02g08405 Brassica carinata HOM05D001603 ORTHO05D001393 3.1e-09 65.9 107 31.8
BcaC02g08407 Brassica carinata HOM05D001603 ORTHO05D001393 3.1e-09 65.9 107 31.8
C04p54690 Brassica napus HOM05D001603 ORTHO05D001393 3.1e-09 65.9 107 31.8
BolC4t27006H Brassica oleracea HOM05D001603 ORTHO05D001393 3.1e-09 65.9 107 31.8
BolC4t27013H Brassica oleracea HOM05D001603 ORTHO05D001393 3.1e-09 65.9 107 31.8
AT5G36480 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 4.0e-09 65.5 108 35.2
BcaC02g08401 Brassica carinata HOM05D001603 ORTHO05D001393 4.0e-09 65.5 107 31.8
BcaC02g08403 Brassica carinata HOM05D001603 ORTHO05D001393 4.0e-09 65.5 107 31.8
BolC4t27011H Brassica oleracea HOM05D001603 ORTHO05D001393 4.0e-09 65.5 107 31.8
CARHR267050 Cardamine hirsuta HOM05D001603 ORTHO05D001393 4.0e-09 65.5 67 38.8
AT4G09545 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 5.3e-09 65.1 110 34.5
AT5G44495 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 5.3e-09 65.1 113 34.5
Atru.chr11.1514 Acer truncatum HOM05D001603 ORTHO05D001393 6.9e-09 64.7 106 31.1
Aqoxy6G02760 Aquilegia oxysepala HOM05D001603 ORTHO05D001393 6.9e-09 64.7 67 41.8
Gorai.013G023700 Gossypium raimondii HOM05D001603 ORTHO05D001393 6.9e-09 64.7 137 28.5
BolC4t27003H Brassica oleracea HOM05D001603 ORTHO05D001393 9.0e-09 64.3 107 30.8
CARHR265960 Cardamine hirsuta HOM05D001603 ORTHO05D001393 9.0e-09 64.3 107 34.6
Peaxi162Scf01694g00006 Petunia axillaris HOM05D001603 ORTHO05D001393 1.5e-08 63.5 71 36.6
Sp1g35035 Schrenkiella parvula HOM05D001603 ORTHO05D001393 1.5e-08 63.5 111 36.0
THA.LOC104809637 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 1.5e-08 63.5 94 35.1
MD02G1018800 Malus domestica HOM05D001603 ORTHO05D001393 2.0e-08 63.2 66 37.9
C04p54670 Brassica napus HOM05D001603 ORTHO05D001393 2.6e-08 62.8 110 30.9
COL.COLO4_24892 Corchorus olitorius HOM05D001603 ORTHO05D001393 3.4e-08 62.4 61 44.3
Gorai.013G023600 Gossypium raimondii HOM05D001603 ORTHO05D001393 3.4e-08 62.4 70 38.6
TWI34G1802 Tripterygium wilfordii HOM05D001603 ORTHO05D001393 3.4e-08 62.4 63 42.9
THA.LOC104811298 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 5.8e-08 61.6 68 39.7
C04p54600 Brassica napus HOM05D001603 ORTHO05D001393 7.6e-08 61.2 106 30.2
C04p54650 Brassica napus HOM05D001603 ORTHO05D001393 9.9e-08 60.8 67 32.8
CARHR154350 Cardamine hirsuta HOM05D001603 ORTHO05D001393 9.9e-08 60.8 64 35.9
Rhsim03G0252800 Rhododendron simsii HOM05D001603 ORTHO05D001393 9.9e-08 60.8 63 39.7
CAN.G467.8 Capsicum annuum HOM05D004213 ORTHO05D005091 3.8e-07 58.9 83 32.5
Sc03g0004410 Simmondsia chinensis HOM05D001603 ORTHO05D001393 4.9e-07 58.5 106 35.8
AT5G36320 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 6.4e-07 58.2 106 34.0
THA.LOC104811131 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 6.4e-07 58.2 65 38.5
THA.LOC104811299 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 6.4e-07 58.2 65 38.5
CARHR256970 Cardamine hirsuta HOM05D001603 ORTHO05D001393 8.4e-07 57.8 55 45.5
vmacro07748 Vaccinium macrocarpon HOM05D001603 ORTHO05D001393 8.4e-07 57.8 68 38.2
Thecc.09G137000 Theobroma cacao HOM05D001603 ORTHO05D001393 1.4e-06 57.0 87 33.3
Aa31sc88G60 Aethionema arabicum HOM05D001603 ORTHO05D001393 1.9e-06 56.6 107 32.7
Peaxi162Scf00088g00821 Petunia axillaris HOM05D001603 ORTHO05D001393 2.4e-06 56.2 78 33.3
THA.LOC104811296 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 2.4e-06 56.2 68 38.2
THA.LOC104811297 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 2.4e-06 56.2 58 41.4
PGSC0003DMG401030716 Solanum tuberosum HOM05D001603 ORTHO05D001393 5.5e-06 55.1 81 30.9
QL02p066142 Quercus lobata HOM05D001603 ORTHO05D001393 9.3e-06 54.3 66 37.9


User provided reference genes

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