Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv11812 Davidia involucrata HOM05D000017 ORTHO05D011894 2.7e-39 164.9 81 100.0
Dinv26433 Davidia involucrata HOM05D000017 ORTHO05D000013 3.7e-33 144.4 75 92.0
Hma1.2p1_1816F.1_g303950 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.3e-17 92.8 58 70.7
Hma1.2p1_0472F.1_g159930 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.7e-17 92.4 58 69.0
Dinv09533 Davidia involucrata HOM05D000017 ORTHO05D011894 2.9e-17 91.7 68 61.8
Dinv06075 Davidia involucrata HOM05D000017 ORTHO05D000013 6.4e-17 90.5 67 59.7
Dinv09582 Davidia involucrata HOM05D000017 ORTHO05D011894 1.9e-16 89.0 80 53.8
Hma1.2p1_1218F.1_g267660 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.4e-16 88.6 58 67.2
Dinv22726 Davidia involucrata HOM05D000017 ORTHO05D000013 1.7e-14 82.4 65 58.5
Hma1.2p1_0223F.1_g094250 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.7e-14 82.4 80 53.8
Hma1.2p1_0438F.1_g153120 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.0e-14 80.9 80 52.5
Dinv11291 Davidia involucrata HOM05D000017 ORTHO05D011894 8.6e-14 80.1 76 55.3
Hma1.2p1_0049F.1_g028220 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.9e-13 79.0 73 49.3
Hma1.2p1_0361F.1_g135970 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.3e-13 78.2 80 52.5
Hma1.2p1_2873F.1_g329720 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.3e-13 78.2 97 45.4
Hma1.2p1_1051F.1_g252080 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.5e-13 76.6 71 49.3
Dinv14599 Davidia involucrata HOM05D000017 ORTHO05D000013 1.2e-10 69.7 65 49.2
Dinv29333 Davidia involucrata HOM05D000017 ORTHO05D000013 1.5e-10 69.3 66 51.5
Hma1.2p1_0026F.1_g016405 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.7e-09 65.9 78 42.3
Hma1.2p1_0292F.1_g115670 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.7e-09 65.9 78 42.3
Hma1.2p1_1000F.1_g246450 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.7e-09 65.9 65 46.2
Hma1.2p1_1314F.1_g275035 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.7e-09 65.9 78 42.3
Hma1.2p1_2048F.1_g312460 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.7e-09 65.9 73 45.2
Sed0005941 Sechium edule HOM05D000017 ORTHO05D000013 1.7e-09 65.9 65 41.5
Hma1.2p1_1233F.1_g268990 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.7e-09 64.7 78 42.3
Hma1.2p1_0046F.1_g027230 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.4e-09 63.9 55 49.1
Hma1.2p1_0593F.1_g185740 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.4e-09 63.9 69 44.9
Hma1.2p1_2684F.1_g326900 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.4e-09 63.9 69 44.9
Dinv10124 Davidia involucrata HOM05D000017 ORTHO05D000013 8.3e-09 63.5 78 38.5
Hma1.2p1_2038F.1_g312050 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 8.3e-09 63.5 51 54.9
Hma1.2p1_2904F.1_g330080 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 8.3e-09 63.5 64 46.9
Hma1.2p1_0257F.1_g103480 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.1e-08 63.2 74 44.6
Hma1.2p1_0436F.1_g152740 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.1e-08 63.2 68 44.1
Hma1.2p1_0624F.1_g191260 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.1e-08 63.2 68 45.6
Hma1.2p1_2155F.1_g315350 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.1e-08 63.2 77 42.9
Hma1.2p1_0085F.1_g044120 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.4e-08 62.8 55 50.9
Hma1.2p1_0085F.1_g044131 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.4e-08 62.8 55 50.9
Hma1.2p1_0175F.1_g077075 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.4e-08 62.0 40 67.5
Hma1.2p1_1218F.1_g267670 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.4e-08 62.0 40 67.5
Hma1.2p1_0157F.1_g068990 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.1e-08 61.2 51 52.9
Hma1.2p1_0257F.1_g103810 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.4e-08 60.8 67 43.3
Dinv03203 Davidia involucrata HOM05D007604 ORTHO05D008966 1.2e-07 59.7 58 51.7
Actinidia29263 Actinidia chinensis HOM05D000017 ORTHO05D000013 1.6e-07 59.3 80 40.0
Hma1.2p1_0048F.1_g028050 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.1e-07 58.9 82 40.2
Hma1.2p1_0936F.1_g238946 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.7e-07 58.5 57 43.9
Hma1.2p1_0936F.1_g238949 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.7e-07 58.5 57 43.9
Hma1.2p1_0192F.1_g083640 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.5e-07 58.2 76 42.1
Hma1.2p1_0449F.1_g155270 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.6e-07 57.8 69 40.6
Lj6g0026475 Lotus japonicus HOM05D008026 ORTHO05D011894 4.6e-07 57.8 52 51.9
Dinv08428 Davidia involucrata HOM05D004264 ORTHO05D008966 6.0e-07 57.4 72 38.9
Hma1.2p1_0068F.1_g037160 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 7.8e-07 57.0 69 39.1
Hma1.2p1_0542F.1_g174870 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.0e-06 56.6 57 43.9
QL06p002257 Quercus lobata HOM05D000017 ORTHO05D011894 1.0e-06 56.6 55 47.3
Rhsim05G0097900 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.0e-06 56.6 55 47.3
Rhsim13G0069300 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.0e-06 56.6 78 35.9
PGR004G0931 Punica granatum HOM05D000017 ORTHO05D000013 1.3e-06 56.2 79 40.5
TPR.G39608 Trifolium pratense HOM05D000017 ORTHO05D000013 1.3e-06 56.2 58 44.8
Dinv17905 Davidia involucrata HOM05D007604 ORTHO05D008966 1.7e-06 55.8 62 48.4
Hma1.2p1_0580F.1_g182840 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.7e-06 55.8 74 37.8
Dinv02016 Davidia involucrata HOM05D007604 ORTHO05D008966 2.3e-06 55.5 58 46.6
Hma1.2p1_0973F.1_g242990 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.3e-06 55.5 74 39.2
Rhsim07G0160300 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.3e-06 55.5 52 50.0
Peaxi162Scf00070g00037 Petunia axillaris HOM05D000017 ORTHO05D000013 3.0e-06 55.1 59 45.8
Cc06_g15030 Coffea canephora HOM05D000017 ORTHO05D000013 3.9e-06 54.7 69 40.6
Hma1.2p1_0561F.1_g178910 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.9e-06 54.7 71 40.8
Medtr5g081480 Medicago truncatula HOM05D000017 ORTHO05D009934 3.9e-06 54.7 76 40.8
Dinv22791 Davidia involucrata HOM05D000017 ORTHO05D000013 5.1e-06 54.3 77 37.7
QL04p086441 Quercus lobata HOM05D000017 ORTHO05D000013 5.1e-06 54.3 77 37.7
FvH4_1g09982 Fragaria vesca HOM05D011213 ORTHO05D012867 8.6e-06 53.5 64 45.3
FvH4_2g11355 Fragaria vesca HOM05D000017 ORTHO05D000013 8.6e-06 53.5 64 45.3
Medtr3g436320 Medicago truncatula HOM05D000017 ORTHO05D010633 8.6e-06 53.5 65 41.5
Rhsim13G0222200 Rhododendron simsii HOM05D000017 ORTHO05D000013 8.6e-06 53.5 57 45.6
TPR.G28103 Trifolium pratense HOM05D000017 ORTHO05D000013 8.6e-06 53.5 54 46.3


User provided reference genes

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