Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv11711 Davidia involucrata HOM05D005682 ORTHO05D007050 2.2e-277 958.4 493 100.0
GSVIVG01010197001 Vitis vinifera HOM05D005682 ORTHO05D007050 4.0e-170 602.1 497 64.2
Lj6A721G56 Lonicera japonica HOM05D005682 ORTHO05D007050 4.5e-166 588.6 525 62.9
Actinidia04079 Actinidia chinensis HOM05D005682 ORTHO05D007050 1.5e-164 583.6 510 62.9
Rhsim09G0074000 Rhododendron simsii HOM05D005682 ORTHO05D007050 6.0e-150 535.0 501 58.5
TAR622G0093 Trochodendron aralioides HOM05D005682 ORTHO05D007050 5.0e-149 531.9 501 56.9
Sabra07G0059000 Salix brachista HOM05D005682 ORTHO05D007050 2.8e-147 526.2 497 56.7
Potri.007G070400 Populus trichocarpa HOM05D005682 ORTHO05D007050 3.6e-147 525.8 496 56.9
Cfa008712 Carpinus fangiana HOM05D005682 ORTHO05D007050 2.3e-146 523.1 493 58.0
Prupe.1G345800 Prunus persica HOM05D005682 ORTHO05D007050 6.8e-146 521.5 500 57.8
Haze_11722 Corylus avellana HOM05D005682 ORTHO05D007050 8.3e-144 514.6 490 58.2
CiPaw.05G167300 Carya illinoinensis HOM05D005682 ORTHO05D007050 3.9e-141 505.8 492 57.9
Duzib132G1218 Durio zibethinus HOM05D005682 ORTHO05D007050 1.1e-140 504.2 475 55.8
Oeu033538.1 Olea europaea HOM05D005682 ORTHO05D007050 7.3e-140 501.5 490 56.1
TWI74G0147 Tripterygium wilfordii HOM05D005682 ORTHO05D007050 3.1e-138 496.1 492 54.3
CANSAT64G0530 Cannabis sativa HOM05D005682 ORTHO05D007050 5.8e-137 491.9 498 54.2
DCAR_002567 Daucus carota HOM05D005682 ORTHO05D007050 4.9e-136 488.8 495 54.3
QL03p043857 Quercus lobata HOM05D005682 ORTHO05D007050 6.4e-136 488.4 508 55.9
arahy.Tifrunner.gnm1.ann1.H4B4B0 Arachis hypogaea HOM05D005682 ORTHO05D007050 1.9e-135 486.9 492 53.7
Nn4g24940 Nelumbo nucifera HOM05D005682 ORTHO05D007050 9.2e-135 484.6 497 52.5
Atru.chr11.1182 Acer truncatum HOM05D005682 ORTHO05D007050 3.5e-134 482.6 495 54.7
Sabra07G0059100 Salix brachista HOM05D005682 ORTHO05D007050 1.1e-132 477.6 491 53.8
MD13G1007100 Malus domestica HOM05D005682 ORTHO05D007050 1.6e-131 473.8 500 54.2
RcHm_v2.0_Chr4g0446491 Rosa chinensis HOM05D005682 ORTHO05D007050 3.1e-130 469.5 496 53.4
ECA246G2025 Erigeron canadensis HOM05D005682 ORTHO05D007050 8.4e-128 461.5 457 55.1
Gohir.A13G059600 Gossypium hirsutum HOM05D005682 ORTHO05D007050 1.1e-127 461.1 474 52.3
PSO063G1542 Papaver somniferum HOM05D005682 ORTHO05D007050 1.1e-127 461.1 499 51.1
Duzib052G0545 Durio zibethinus HOM05D005682 ORTHO05D007050 2.4e-127 459.9 478 51.3
Gorai.013G070900 Gossypium raimondii HOM05D005682 ORTHO05D007050 4.2e-127 459.1 474 52.1
MSTRG.433 Avicennia marina HOM05D005682 ORTHO05D007050 5.4e-127 458.8 488 51.2
Migut.L00859 Erythranthe guttata HOM05D005682 ORTHO05D007050 1.7e-125 453.8 486 49.2
HanXRQChr17g0540811 Helianthus annuus HOM05D005682 ORTHO05D007050 1.7e-125 453.8 491 52.1
vmacro10900 Vaccinium macrocarpon HOM05D005682 ORTHO05D007050 2.3e-125 453.4 571 47.5
Gohir.D13G062400 Gossypium hirsutum HOM05D005682 ORTHO05D007050 8.7e-125 451.4 474 51.5
Phvul.011G031200 Phaseolus vulgaris HOM05D005682 ORTHO05D007050 1.9e-124 450.3 493 50.5
Eucgr.J00855 Eucalyptus grandis HOM05D005682 ORTHO05D007050 3.3e-124 449.5 496 51.2
Glyma.11G102200 Glycine max HOM05D005682 ORTHO05D007050 5.6e-124 448.7 497 50.9
FvH4_4g36771 Fragaria vesca HOM05D005682 ORTHO05D007050 3.6e-123 446.0 499 49.9
PSO782G3049 Papaver somniferum HOM05D005682 ORTHO05D007050 3.6e-123 446.0 493 51.5
VMungo1127G0377 Vigna mungo HOM05D005682 ORTHO05D007050 6.9e-122 441.8 493 50.1
Lsat_1_v5_gn_3_33580 Lactuca sativa HOM05D005682 ORTHO05D007050 3.4e-121 439.5 480 51.9
Lalb_Chr01g0001491 Lupinus albus HOM05D005682 ORTHO05D007050 1.7e-120 437.2 493 51.5
Sc06g0007890 Simmondsia chinensis HOM05D005682 ORTHO05D007050 1.1e-119 434.5 480 49.6
FAN17G1521 Fragaria x ananassa HOM05D005682 ORTHO05D007050 5.4e-119 432.2 496 49.2
PGR044G2237 Punica granatum HOM05D005682 ORTHO05D007050 5.4e-119 432.2 492 50.8
ClCG09G004600 Citrullus lanatus HOM05D005682 ORTHO05D007050 1.2e-118 431.0 496 49.4
THA.LOC104826522 Tarenaya hassleriana HOM05D005682 ORTHO05D007050 1.2e-118 431.0 494 48.6
SalBow2G1379 Salvia bowleyana HOM05D005682 ORTHO05D007050 3.0e-117 426.4 493 49.3
Lj3g0015709 Lotus japonicus HOM05D005682 ORTHO05D007050 7.3e-116 421.8 491 49.7
MELO3C023602.2 Cucumis melo HOM05D005682 ORTHO05D007050 1.6e-115 420.6 497 48.7
FAN07G1253 Fragaria x ananassa HOM05D005682 ORTHO05D007050 2.8e-115 419.9 495 48.3
Hund13152 Selenicereus undatus HOM05D005682 ORTHO05D007050 9.0e-114 414.8 477 48.2
Aqoxy2G03805 Aquilegia oxysepala HOM05D005682 ORTHO05D007050 3.2e-111 406.4 469 49.5
Psat7g173480 Pisum sativum HOM05D005682 ORTHO05D007050 7.1e-111 405.2 490 47.8
Sed0007950 Sechium edule HOM05D005682 ORTHO05D007050 1.6e-110 404.1 496 47.4
Medtr4g074610 Medicago truncatula HOM05D005682 ORTHO05D007050 2.1e-110 403.7 494 46.6
TPR.G32358 Trifolium pratense HOM05D005682 ORTHO05D007050 2.7e-110 403.3 478 47.3
AL3G33230 Arabidopsis lyrata HOM05D005682 ORTHO05D007050 6.7e-109 398.7 475 47.4
EL10Ac9g20684 Beta vulgaris HOM05D005682 ORTHO05D007050 3.7e-107 392.9 485 46.2
Ca_03025_v3 Cicer arietinum L. HOM05D005682 ORTHO05D007050 1.7e-104 384.0 493 44.8
BcaB06g26047 Brassica carinata HOM05D005682 ORTHO05D007050 4.9e-104 382.5 474 45.8
BraA05t21829Z Brassica rapa HOM05D005682 ORTHO05D007050 4.9e-104 382.5 475 45.9
Carub.0003s1966 Capsella rubella HOM05D005682 ORTHO05D007050 1.1e-103 381.3 476 45.8
Ah.14g085910 Amaranthus hybridus HOM05D005682 ORTHO05D007050 3.2e-103 379.8 494 43.3
BcaC05g28416 Brassica carinata HOM05D005682 ORTHO05D007050 3.2e-103 379.8 476 45.4
BolC5t33225H Brassica oleracea HOM05D005682 ORTHO05D007050 6.0e-102 375.6 479 44.9
CsaV3_7G030540 Cucumis sativus L. HOM05D005682 ORTHO05D007050 1.0e-101 374.8 454 49.1
Thhalv10019965m.g Eutrema salsugineum HOM05D005682 ORTHO05D007050 6.7e-101 372.1 487 43.1
AT3G19780 Arabidopsis thaliana HOM05D005682 ORTHO05D007050 1.3e-99 367.9 471 43.9
AUR62018178 Chenopodium quinoa HOM05D005682 ORTHO05D007050 1.6e-99 367.5 530 41.3
Aa31LG8G6560 Aethionema arabicum HOM05D005682 ORTHO05D007050 1.6e-94 350.9 474 42.6
Thecc.02G161600 Theobroma cacao HOM05D005682 ORTHO05D007050 2.5e-92 343.6 316 57.9
Sp3g17800 Schrenkiella parvula HOM05D005682 ORTHO05D007050 5.7e-92 342.4 477 42.6
AUR62038663 Chenopodium quinoa HOM05D005682 ORTHO05D007050 4.1e-90 336.3 487 41.5
Cc11_g00090 Coffea canephora HOM05D005682 ORTHO05D007050 7.7e-89 332.0 452 46.0
ATR0618G435 Amborella trichopoda HOM05D005682 ORTHO05D000625 1.1e-87 328.2 507 38.9
Ciclev10030666m.g Citrus clementina HOM05D005682 ORTHO05D007050 7.2e-87 325.5 325 56.9
arahy.Tifrunner.gnm1.ann1.3I7IYH Arachis hypogaea HOM05D005682 ORTHO05D007050 1.7e-83 314.3 354 51.7
Sopen02g009170 Solanum pennellii HOM05D005682 ORTHO05D007050 5.3e-82 309.3 328 54.3
Manes.11G108701 Manihot esculenta HOM05D005682 ORTHO05D007050 6.9e-82 308.9 303 56.1
Peaxi162Scf00363g00730 Petunia axillaris HOM05D005682 ORTHO05D007050 1.7e-80 304.3 303 56.4
HPP92_008562 Vanilla planifolia HOM05D005682 ORTHO05D007050 1.1e-79 301.6 466 39.3
CAN.G157.17 Capsicum annuum HOM05D005682 ORTHO05D007050 3.9e-77 293.1 253 59.7
Zm00001eb221340 Zea mays HOM05D005682 ORTHO05D007050 1.1e-74 285.0 489 35.8
unitig_699.g19973 Utricularia gibba HOM05D005682 ORTHO05D007050 2.1e-70 270.8 489 35.6
BcaC05g28407 Brassica carinata HOM05D005682 ORTHO05D007050 3.3e-68 263.5 301 45.8
CSS0001307 Camellia sinensis var. sinensis HOM05D005682 ORTHO05D007050 1.2e-65 255.0 223 61.9
Solyc02g055460.3 Solanum lycopersicum HOM05D005682 ORTHO05D007050 5.9e-65 252.7 308 48.4
BraA05t21816Z Brassica rapa HOM05D005682 ORTHO05D007050 3.8e-64 250.0 301 46.2
C05p45010 Brassica napus HOM05D005682 ORTHO05D007050 4.7e-62 243.0 303 44.2
A05p29780 Brassica napus HOM05D005682 ORTHO05D007050 1.8e-61 241.1 304 44.4
Cc11_g04390 Coffea canephora HOM05D005682 ORTHO05D007050 2.0e-60 237.7 260 50.4
SHI13894 Sapria himalayana HOM05D005682 ORTHO05D007050 2.6e-60 237.3 307 43.6
CARHR095290 Cardamine hirsuta HOM05D005682 ORTHO05D007050 2.8e-59 233.8 298 45.0
CDE04G1313 Ceratophyllum demersum HOM05D005682 ORTHO05D007050 3.4e-52 210.3 240 45.8
Nitab4.5_0002392g0020 Nicotiana tabacum HOM05D005682 ORTHO05D007050 2.2e-51 207.6 195 55.9
SEGI_38899 Sequoiadendron giganteum HOM05D005682 ORTHO05D007050 2.8e-51 207.2 557 29.4
Sopen02g009200 Solanum pennellii HOM05D005682 ORTHO05D007050 4.2e-47 193.4 139 67.6
Solyc02g055470.2 Solanum lycopersicum HOM05D005682 ORTHO05D007050 7.2e-47 192.6 138 68.1
Nitab4.5_0028170g0010 Nicotiana tabacum HOM05D005682 ORTHO05D007050 4.9e-43 179.9 207 52.2
Nitab4.5_0000139g0140 Nicotiana tabacum HOM05D005682 ORTHO05D007050 5.4e-42 176.4 190 54.2
CAN.G157.16 Capsicum annuum HOM05D005682 ORTHO05D007050 2.9e-40 170.6 195 52.8
Nitab4.5_0000139g0150 Nicotiana tabacum HOM05D005682 ORTHO05D007050 2.9e-40 170.6 132 63.6
CSS0026201 Camellia sinensis var. sinensis HOM05D005682 ORTHO05D007050 6.6e-40 169.5 132 64.4
COL.COLO4_08119 Corchorus olitorius HOM05D005682 ORTHO05D007050 6.6e-40 169.5 134 57.5
A05p29790 Brassica napus HOM05D005682 ORTHO05D007050 1.4e-34 151.8 162 50.6
Peaxi162Scf00363g00073 Petunia axillaris HOM05D005682 ORTHO05D007050 1.1e-31 142.1 120 60.8
AagrBONN_evm.TU.Sc2ySwM_340.174 Anthoceros agrestis HOM05D005682 ORTHO05D007050 2.0e-28 131.3 523 25.8
C05p44920 Brassica napus HOM05D005682 ORTHO05D007050 5.8e-28 129.8 154 42.2
CSS0031646 Camellia sinensis var. sinensis HOM05D005682 ORTHO05D007050 5.6e-23 113.2 98 65.3
Pp3c7_6630 Physcomitrium patens HOM05D005682 ORTHO05D007050 1.2e-22 112.1 384 26.6
CARHR095300 Cardamine hirsuta HOM05D005682 ORTHO05D007050 6.8e-21 106.3 168 39.9
SHI13893 Sapria himalayana HOM05D005682 ORTHO05D007050 4.4e-20 103.6 184 38.0
Aqoxy2G03797 Aquilegia oxysepala HOM05D005682 ORTHO05D007050 2.7e-17 94.4 106 48.1
COL.COLO4_08120 Corchorus olitorius HOM05D005682 ORTHO05D007050 4.4e-12 77.0 155 32.9
HPP92_008566 Vanilla planifolia HOM05D005682 ORTHO05D007050 2.9e-11 74.3 172 34.3
SMO367G0225 Selaginella moellendorffii HOM05D004192 ORTHO05D004917 5.4e-10 70.1 358 24.0
FvH4_4g15932 Fragaria vesca HOM05D005682 ORTHO05D007050 2.1e-09 68.2 106 37.7
CBR_g66815 Chara braunii HOM05D005682 ORTHO05D007050 8.7e-08 62.8 120 28.3
FvH4_6g37553 Fragaria vesca HOM05D005682 ORTHO05D007050 4.3e-07 60.5 61 49.2


User provided reference genes

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