Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv11704 Davidia involucrata HOM05D006978 ORTHO05D008723 2.6e-222 775.0 377 100.0
Hma1.2p1_0065F.1_g034960 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 3.7e-168 595.1 340 85.0
CSS0048975 Camellia sinensis var. sinensis HOM05D006978 ORTHO05D008723 2.8e-160 568.9 338 80.5
QL03p051315 Quercus lobata HOM05D006978 ORTHO05D008723 5.4e-159 564.7 334 81.1
Cfa009396 Carpinus fangiana HOM05D006978 ORTHO05D008723 5.6e-156 554.7 332 79.2
TAR371G0953 Trochodendron aralioides HOM05D006978 ORTHO05D008723 3.6e-155 552.0 336 79.2
CiPaw.05G106100 Carya illinoinensis HOM05D006978 ORTHO05D008723 8.0e-155 550.8 334 79.0
Actinidia09621 Actinidia chinensis HOM05D006978 ORTHO05D008723 4.9e-152 541.6 336 78.3
Ciclev10031990m.g Citrus clementina HOM05D006978 ORTHO05D008723 3.2e-151 538.9 336 79.5
RcHm_v2.0_Chr4g0429651 Rosa chinensis HOM05D006978 ORTHO05D008723 1.6e-150 536.6 305 83.6
Lj3A1073G42 Lonicera japonica HOM05D006978 ORTHO05D008723 5.9e-150 534.6 298 84.2
FvH4_4g23290 Fragaria vesca HOM05D006978 ORTHO05D008723 3.0e-149 532.3 314 80.6
FAN07G2913 Fragaria x ananassa HOM05D006978 ORTHO05D008723 1.1e-148 530.4 314 80.3
FAN17G0898 Fragaria x ananassa HOM05D006978 ORTHO05D008723 2.5e-148 529.3 314 79.9
Thecc.02G200200 Theobroma cacao HOM05D006978 ORTHO05D008723 3.3e-148 528.9 342 74.0
Prupe.1G221700 Prunus persica HOM05D006978 ORTHO05D008723 5.6e-148 528.1 339 75.5
GSVIVG01000920001 Vitis vinifera HOM05D006978 ORTHO05D008723 5.6e-148 528.1 297 83.5
FAN12G0972 Fragaria x ananassa HOM05D006978 ORTHO05D008723 1.6e-147 526.6 314 79.9
PSO017G5946 Papaver somniferum HOM05D006978 ORTHO05D008723 2.8e-147 525.8 330 75.8
Nn3g16378 Nelumbo nucifera HOM05D006978 ORTHO05D008723 4.0e-146 521.9 340 73.5
TWI36G1146 Tripterygium wilfordii HOM05D006978 ORTHO05D008723 4.0e-146 521.9 303 80.9
PSO478G2402 Papaver somniferum HOM05D006978 ORTHO05D008723 6.8e-146 521.2 336 74.7
Potri.003G167600 Populus trichocarpa HOM05D006978 ORTHO05D008723 1.5e-145 520.0 304 81.6
Sabra03G0122900 Salix brachista HOM05D006978 ORTHO05D008723 2.0e-145 519.6 303 80.9
HanXRQChr08g0210001 Helianthus annuus HOM05D006978 ORTHO05D008723 1.7e-144 516.5 345 74.2
Duzib248G1034 Durio zibethinus HOM05D006978 ORTHO05D008723 1.4e-143 513.5 339 72.6
Sopen01g005540 Solanum pennellii HOM05D006978 ORTHO05D008723 7.0e-143 511.1 345 73.6
Solyc01g009970.3 Solanum lycopersicum HOM05D006978 ORTHO05D008723 9.2e-143 510.8 346 73.7
CAN.G373.1 Capsicum annuum HOM05D006978 ORTHO05D008723 2.0e-142 509.6 284 82.4
vmacro16091 Vaccinium macrocarpon HOM05D006978 ORTHO05D008723 3.5e-142 508.8 361 71.5
Nitab4.5_0001771g0130 Nicotiana tabacum HOM05D006978 ORTHO05D008723 1.7e-141 506.5 338 72.2
CANSAT01G1132 Cannabis sativa HOM05D006978 ORTHO05D008723 2.3e-141 506.1 304 76.3
PGR102G2599 Punica granatum HOM05D006978 ORTHO05D008723 6.6e-141 504.6 332 71.4
Cc11_g17300 Coffea canephora HOM05D006978 ORTHO05D008723 1.9e-140 503.1 291 80.1
TPR.G2900 Trifolium pratense HOM05D006978 ORTHO05D008723 1.9e-140 503.1 329 74.5
Gorai.005G194100 Gossypium raimondii HOM05D006978 ORTHO05D008723 3.3e-140 502.3 305 77.4
Nitab4.5_0004878g0040 Nicotiana tabacum HOM05D006978 ORTHO05D008723 3.3e-140 502.3 342 70.8
Aqoxy5G03257 Aquilegia oxysepala HOM05D006978 ORTHO05D008723 4.3e-140 501.9 289 79.9
Gohir.A03G149500 Gossypium hirsutum HOM05D006978 ORTHO05D008723 5.6e-140 501.5 305 77.0
Gohir.D02G172400 Gossypium hirsutum HOM05D006978 ORTHO05D008723 4.7e-139 498.4 312 75.6
Lj1g0015384 Lotus japonicus HOM05D006978 ORTHO05D008723 4.7e-139 498.4 305 77.4
PGSC0003DMG400005222 Solanum tuberosum HOM05D006978 ORTHO05D008723 4.7e-139 498.4 288 80.9
Migut.K01011 Erythranthe guttata HOM05D006978 ORTHO05D008723 8.1e-139 497.7 342 71.1
AUR62005659 Chenopodium quinoa HOM05D006978 ORTHO05D008723 4.0e-138 495.4 315 73.0
MD16G1123900 Malus domestica HOM05D006978 ORTHO05D008723 4.0e-138 495.4 336 73.2
ECA233G0335 Erigeron canadensis HOM05D006978 ORTHO05D008723 5.2e-138 495.0 284 82.0
Medtr7g022480 Medicago truncatula HOM05D006978 ORTHO05D008723 8.9e-138 494.2 312 75.0
Ca_07142_v3 Cicer arietinum L. HOM05D006978 ORTHO05D008723 1.5e-137 493.4 320 74.7
Psat3g186920 Pisum sativum HOM05D006978 ORTHO05D008723 4.4e-137 491.9 314 75.8
EL10Ac6g13545 Beta vulgaris HOM05D006978 ORTHO05D008723 5.8e-137 491.5 317 71.6
Oeu011352.1 Olea europaea HOM05D006978 ORTHO05D008723 1.7e-136 490.0 281 81.9
DCAR_031207 Daucus carota HOM05D006978 ORTHO05D008723 3.7e-136 488.8 284 78.5
Eucgr.B03530 Eucalyptus grandis HOM05D006978 ORTHO05D008723 6.4e-136 488.0 300 76.7
CsaV3_4G002940 Cucumis sativus L. HOM05D006978 ORTHO05D008723 1.4e-135 486.9 312 72.4
VMungo1383G2882 Vigna mungo HOM05D000485 ORTHO05D000341 1.9e-135 486.5 301 77.4
ClCG07G015370 Citrullus lanatus HOM05D006978 ORTHO05D008723 4.1e-135 485.3 334 68.3
AUR62028894 Chenopodium quinoa HOM05D006978 ORTHO05D008723 5.4e-135 485.0 287 76.3
MELO3C017748.2 Cucumis melo HOM05D006978 ORTHO05D008723 5.4e-135 485.0 287 76.3
arahy.Tifrunner.gnm1.ann1.2517Z7 Arachis hypogaea HOM05D006978 ORTHO05D008723 4.6e-134 481.9 307 73.9
arahy.Tifrunner.gnm1.ann1.HCE1UU Arachis hypogaea HOM05D006978 ORTHO05D008723 4.6e-134 481.9 307 73.9
CARHR129600 Cardamine hirsuta HOM05D006978 ORTHO05D008723 6.6e-133 478.0 302 75.8
Lalb_Chr10g0092011 Lupinus albus HOM05D006978 ORTHO05D008723 6.6e-133 478.0 310 72.6
Thhalv10016892m.g Eutrema salsugineum HOM05D006978 ORTHO05D008723 1.1e-132 477.2 302 74.2
A05p10300 Brassica napus HOM05D006978 ORTHO05D008723 3.3e-132 475.7 303 74.9
AL4G31500 Arabidopsis lyrata HOM05D006978 ORTHO05D008723 5.6e-132 474.9 288 76.7
BcaB02g09429 Brassica carinata HOM05D006978 ORTHO05D008723 5.6e-132 474.9 302 74.5
Carub.0004s1713 Capsella rubella HOM05D006978 ORTHO05D008723 1.2e-131 473.8 302 72.8
BcaC02g11649 Brassica carinata HOM05D006978 ORTHO05D008723 2.8e-131 472.6 302 73.8
BraA05t19968Z Brassica rapa HOM05D006978 ORTHO05D008723 2.8e-131 472.6 303 74.6
THA.LOC104814198 Tarenaya hassleriana HOM05D006978 ORTHO05D008723 2.8e-131 472.6 301 73.8
Sp4g17670 Schrenkiella parvula HOM05D006978 ORTHO05D008723 1.1e-130 470.7 302 73.8
Haze_12456 Corylus avellana HOM05D006978 ORTHO05D008723 2.3e-130 469.5 285 76.8
SalBow2G2397 Salvia bowleyana HOM05D006978 ORTHO05D008723 2.3e-130 469.5 360 65.6
BolC4t22921H Brassica oleracea HOM05D006978 ORTHO05D008723 1.2e-129 467.2 303 73.6
AT2G35450 Arabidopsis thaliana HOM05D006978 ORTHO05D008723 2.6e-129 466.1 302 73.2
C04p12730 Brassica napus HOM05D006978 ORTHO05D008723 3.4e-129 465.7 303 73.3
Aa31LG9G13360 Aethionema arabicum HOM05D006978 ORTHO05D008723 1.3e-128 463.8 301 73.1
Atru.BG.287.p Acer truncatum HOM05D006978 ORTHO05D008723 1.7e-128 463.4 269 78.8
Os04g0391900 Oryza sativa ssp. japonica HOM05D006978 ORTHO05D008723 1.4e-127 460.3 286 70.6
Glyma.18G285000 Glycine max HOM05D006978 ORTHO05D008723 1.0e-125 454.1 292 70.9
Sc11g0000330 Simmondsia chinensis HOM05D006978 ORTHO05D008723 6.6e-125 451.4 283 72.8
Hund06110 Selenicereus undatus HOM05D006978 ORTHO05D008723 1.3e-120 437.2 310 70.0
Peaxi162Scf00255g00025 Petunia axillaris HOM05D006978 ORTHO05D008723 1.6e-118 430.3 247 81.8
SEGI_15057 Sequoiadendron giganteum HOM05D006978 ORTHO05D008723 1.7e-117 426.8 301 64.8
Sed0026660 Sechium edule HOM05D006978 ORTHO05D008723 2.8e-115 419.5 283 68.9
Glyma.18G284800 Glycine max HOM05D006978 ORTHO05D008723 1.2e-113 414.1 305 66.2
Phvul.008G016700 Phaseolus vulgaris HOM05D006978 ORTHO05D008723 4.4e-113 412.1 243 79.4
Atru.chr11.2376 Acer truncatum HOM05D006978 ORTHO05D008723 5.8e-113 411.8 243 77.8
Mapoly0133s0049 Marchantia polymorpha HOM05D006978 ORTHO05D008723 1.3e-112 410.6 302 62.3
ATR0582G006 Amborella trichopoda HOM05D006978 ORTHO05D008723 1.4e-111 407.1 247 76.1
Pp3c1_20610 Physcomitrium patens HOM05D006978 ORTHO05D008723 2.4e-111 406.4 302 63.6
CDE06G2364 Ceratophyllum demersum HOM05D006978 ORTHO05D008723 1.8e-106 390.2 306 61.1
SMO118G0021 Selaginella moellendorffii HOM05D006978 ORTHO05D008723 1.9e-103 380.2 288 59.0
Ah.02g130990 Amaranthus hybridus HOM05D006978 ORTHO05D008723 2.1e-102 376.7 315 59.7
Manes.13G007900 Manihot esculenta HOM05D006978 ORTHO05D008723 4.3e-100 369.0 252 71.8
AagrBONN_evm.TU.Sc2ySwM_117.2371 Anthoceros agrestis HOM05D006978 ORTHO05D008723 7.9e-94 348.2 284 56.0
Zm00001eb421220 Zea mays HOM05D006978 ORTHO05D008723 3.0e-85 319.7 195 74.4
MCO09G507 Micromonas commoda HOM05D006978 ORTHO05D008723 6.5e-72 275.4 294 48.0
MSTRG.476 Avicennia marina HOM05D006978 ORTHO05D008723 7.2e-71 271.9 173 76.3
Hma1.2p1_0065F.1_g034970 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 9.1e-66 255.0 156 80.1
Cpa.g.sc99.56 Carica papaya HOM05D006978 ORTHO05D008723 5.2e-61 239.2 142 80.3
MBI11_g38268_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 3.7e-51 206.5 109 83.5
Glyma.02G096500 Glycine max HOM05D006978 ORTHO05D008723 4.1e-50 203.0 115 76.5
SalBow2G1646 Salvia bowleyana HOM05D006978 ORTHO05D008723 3.0e-45 186.8 105 83.8
PRCOL_00001136 Prasinoderma coloniale HOM05D006978 ORTHO05D008723 1.7e-40 171.0 282 36.5
Actinidia34017 Actinidia chinensis HOM05D006978 ORTHO05D008723 2.1e-38 164.1 156 56.4
MBI11_g38269_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 2.1e-38 164.1 107 73.8
Rhsim12G0096200 Rhododendron simsii HOM05D006978 ORTHO05D008723 5.7e-36 156.0 156 56.4
arahy.Tifrunner.gnm1.ann1.5L80US Arachis hypogaea HOM05D006978 ORTHO05D008723 3.3e-31 140.2 91 73.6
Cpa.g.sc99.55 Carica papaya HOM05D006978 ORTHO05D008723 1.5e-23 114.8 139 46.8
Peaxi162Scf00255g00026 Petunia axillaris HOM05D006978 ORTHO05D008723 2.6e-20 104.0 100 55.0
arahy.Tifrunner.gnm1.ann1.0RBU3Z Arachis hypogaea HOM05D006978 ORTHO05D008723 1.0e-16 92.0 55 72.7
RcHm_v2.0_Chr2g0135531 Rosa chinensis HOM05D006978 ORTHO05D008723 1.3e-11 75.1 40 77.5
MBI11_g31938_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.7e-11 74.7 45 80.0
MBI11_g31937_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 7.1e-10 69.3 42 71.4


User provided reference genes

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