Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv11693 Davidia involucrata HOM05D005688 ORTHO05D006630 9.0e-198 693.3 340 100.0
Dinv17591 Davidia involucrata HOM05D005688 ORTHO05D006630 1.3e-180 636.3 340 90.6
Hma1.2p1_0065F.1_g035040 Hydrangea macrophylla HOM05D005688 ORTHO05D006630 8.2e-175 617.1 344 86.9
Actinidia09624 Actinidia chinensis HOM05D005688 ORTHO05D006630 5.9e-165 584.3 343 83.4
CSS0038243 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 8.5e-164 580.5 346 82.1
Lj6A830T28 Lonicera japonica HOM05D005688 ORTHO05D006630 1.6e-162 576.2 345 83.5
CSS0036763 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 6.8e-161 570.9 345 83.2
TAR629G3099 Trochodendron aralioides HOM05D005688 ORTHO05D006630 4.8e-159 564.7 347 79.8
Lsat_1_v5_gn_4_280 Lactuca sativa HOM05D005688 ORTHO05D006630 2.9e-156 555.4 353 78.2
Nitab4.5_0002277g0010 Nicotiana tabacum HOM05D005688 ORTHO05D006630 1.9e-155 552.7 350 77.7
Nitab4.5_0000251g0050 Nicotiana tabacum HOM05D005688 ORTHO05D006630 9.4e-155 550.4 352 76.7
Haze_12451 Corylus avellana HOM05D005688 ORTHO05D006630 1.4e-153 546.6 351 77.8
Cfa009390 Carpinus fangiana HOM05D005688 ORTHO05D006630 3.4e-152 542.0 351 76.9
Rhsim12G0023600 Rhododendron simsii HOM05D005688 ORTHO05D006630 1.7e-151 539.7 352 76.1
HanXRQChr17g0568911 Helianthus annuus HOM05D005688 ORTHO05D006630 2.2e-151 539.3 343 77.6
Actinidia39795 Actinidia chinensis HOM05D005688 ORTHO05D006630 2.8e-151 538.9 322 82.3
Sopen05g011970 Solanum pennellii HOM05D005688 ORTHO05D006630 1.1e-150 537.0 347 76.4
PGSC0003DMG400010801 Solanum tuberosum HOM05D005688 ORTHO05D006630 1.1e-150 537.0 347 76.4
Solyc05g015980.3 Solanum lycopersicum HOM05D005688 ORTHO05D006630 5.4e-150 534.6 347 76.1
TAR371G0171 Trochodendron aralioides HOM05D005688 ORTHO05D006630 7.0e-150 534.3 347 77.2
Manes.12G008200 Manihot esculenta HOM05D005688 ORTHO05D006630 5.9e-149 531.2 353 75.6
Phvul.008G017000 Phaseolus vulgaris HOM05D005688 ORTHO05D006630 5.9e-149 531.2 357 74.8
ECA234G1377 Erigeron canadensis HOM05D005688 ORTHO05D006630 1.7e-148 529.6 341 76.5
MSTRG.481 Avicennia marina HOM05D005688 ORTHO05D006630 2.9e-148 528.9 337 76.0
Prupe.1G222300 Prunus persica HOM05D005688 ORTHO05D006630 1.5e-147 526.6 358 72.6
Potri.001G059700 Populus trichocarpa HOM05D005688 ORTHO05D006630 2.5e-147 525.8 354 75.1
Duzib251G0174 Durio zibethinus HOM05D005688 ORTHO05D006630 9.5e-147 523.9 351 72.9
Thecc.02G201300 Theobroma cacao HOM05D005688 ORTHO05D006630 1.2e-146 523.5 353 73.9
CANSAT80G0816 Cannabis sativa HOM05D005688 ORTHO05D006630 1.6e-146 523.1 347 74.9
SalBow2G0527 Salvia bowleyana HOM05D005688 ORTHO05D006630 1.6e-146 523.1 337 76.3
Migut.E00005 Erythranthe guttata HOM05D005688 ORTHO05D006630 2.1e-146 522.7 345 74.8
FAN17G3098 Fragaria x ananassa HOM05D005688 ORTHO05D006630 2.1e-146 522.7 357 72.0
Lalb_Chr10g0092021 Lupinus albus HOM05D005688 ORTHO05D006630 2.8e-146 522.3 359 73.5
Gohir.A04G100300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 4.7e-146 521.5 350 72.6
MD16G1123300 Malus domestica HOM05D005688 ORTHO05D006630 4.7e-146 521.5 356 73.3
FAN07G0693 Fragaria x ananassa HOM05D005688 ORTHO05D006630 6.1e-146 521.2 357 72.0
Gohir.D04G139300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 1.4e-145 520.0 350 72.6
vmacro01046 Vaccinium macrocarpon HOM05D005688 ORTHO05D006630 1.8e-145 519.6 366 73.2
Gorai.012G124400 Gossypium raimondii HOM05D005688 ORTHO05D006630 2.3e-145 519.2 350 72.9
FvH4_4g23370 Fragaria vesca HOM05D005688 ORTHO05D006630 3.0e-145 518.8 356 72.2
FAN12G1631 Fragaria x ananassa HOM05D005688 ORTHO05D006630 3.0e-145 518.8 356 72.2
Potri.003G168300 Populus trichocarpa HOM05D005688 ORTHO05D006630 5.2e-145 518.1 355 75.2
DCAR_024659 Daucus carota HOM05D005688 ORTHO05D006630 1.5e-144 516.5 341 75.7
Glyma.18G284500 Glycine max HOM05D005688 ORTHO05D006630 1.5e-144 516.5 358 74.6
Ca_07133_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 2.0e-144 516.2 360 73.6
Ca_28122_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 2.0e-144 516.2 360 73.6
Sc04g0010310 Simmondsia chinensis HOM05D005688 ORTHO05D006630 9.8e-144 513.8 341 74.2
MELO3C017746.2 Cucumis melo HOM05D005688 ORTHO05D006630 1.3e-143 513.5 358 71.5
RcHm_v2.0_Chr4g0429761 Rosa chinensis HOM05D005688 ORTHO05D006630 1.7e-143 513.1 356 73.3
Ciclev10032000m.g Citrus clementina HOM05D005688 ORTHO05D006630 2.8e-143 512.3 355 72.1
Glyma.02G097000 Glycine max HOM05D005688 ORTHO05D006630 3.7e-143 511.9 359 74.4
TWI75G1512 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 8.3e-143 510.8 353 72.8
CiPaw.05G106800 Carya illinoinensis HOM05D005688 ORTHO05D006630 1.1e-142 510.4 355 73.0
Lalb_Chr17g0336391 Lupinus albus HOM05D005688 ORTHO05D006630 2.4e-142 509.2 354 72.9
arahy.Tifrunner.gnm1.ann1.97E8EB Arachis hypogaea HOM05D005688 ORTHO05D006630 4.1e-142 508.4 374 71.7
arahy.Tifrunner.gnm1.ann1.N9VQT0 Arachis hypogaea HOM05D005688 ORTHO05D006630 4.1e-142 508.4 374 71.7
CsaV3_4G002970 Cucumis sativus L. HOM05D005688 ORTHO05D006630 7.0e-142 507.7 360 70.6
QL03p051598 Quercus lobata HOM05D005688 ORTHO05D006630 1.2e-141 506.9 365 70.4
Medtr7g022390 Medicago truncatula HOM05D005688 ORTHO05D006630 1.6e-141 506.5 361 72.3
Nn3g16394 Nelumbo nucifera HOM05D005688 ORTHO05D006630 2.0e-141 506.1 347 73.2
PGR102G0765 Punica granatum HOM05D005688 ORTHO05D006630 4.5e-141 505.0 350 71.1
TWI36G1544 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 5.9e-141 504.6 356 71.9
Duzib248G1308 Durio zibethinus HOM05D005688 ORTHO05D006630 1.0e-140 503.8 353 71.4
Sed0014060 Sechium edule HOM05D005688 ORTHO05D006630 1.1e-139 500.4 358 70.9
THA.LOC104810209 Tarenaya hassleriana HOM05D005688 ORTHO05D006630 1.5e-139 500.0 353 69.4
Lj1g0000862 Lotus japonicus HOM05D005688 ORTHO05D006630 1.9e-139 499.6 367 71.1
Peaxi162Scf00128g01523 Petunia axillaris HOM05D005688 ORTHO05D006630 3.3e-139 498.8 354 70.9
Aa31LG3G14570 Aethionema arabicum HOM05D005688 ORTHO05D006630 1.6e-138 496.5 357 69.5
CARHR200370 Cardamine hirsuta HOM05D005688 ORTHO05D006630 4.7e-138 495.0 359 68.5
BolC9t59237H Brassica oleracea HOM05D005688 ORTHO05D006630 8.0e-138 494.2 358 67.0
Carub.0006s1127 Capsella rubella HOM05D005688 ORTHO05D006630 1.8e-137 493.0 358 68.2
Sp6g30880 Schrenkiella parvula HOM05D005688 ORTHO05D006630 1.8e-137 493.0 362 67.4
BraA03t09920Z Brassica rapa HOM05D000918 ORTHO05D006630 3.1e-137 492.3 359 67.7
Thhalv10013944m.g Eutrema salsugineum HOM05D005688 ORTHO05D006630 3.1e-137 492.3 360 68.1
C03p06760 Brassica napus HOM05D000918 ORTHO05D006630 5.2e-137 491.5 359 67.7
BolC3t13183H Brassica oleracea HOM05D000918 ORTHO05D006630 5.2e-137 491.5 359 67.7
AL6G23700 Arabidopsis lyrata HOM05D005688 ORTHO05D006630 6.8e-137 491.1 359 67.7
Aqoxy3G01629 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 8.9e-137 490.7 350 70.9
unitig_26.g10416 Utricularia gibba HOM05D005688 ORTHO05D006630 1.5e-136 490.0 343 71.7
TPR.G2946 Trifolium pratense HOM05D005688 ORTHO05D006630 2.6e-136 489.2 348 72.1
AT5G13100 Arabidopsis thaliana HOM05D005688 ORTHO05D006630 3.4e-136 488.8 359 67.7
A03p05810 Brassica napus HOM05D000918 ORTHO05D000791 4.4e-136 488.4 359 67.1
C09p63990 Brassica napus HOM05D000918 ORTHO05D006630 4.4e-136 488.4 350 66.9
BraA10t44572Z Brassica rapa HOM05D005688 ORTHO05D006630 5.8e-136 488.0 360 66.4
Hund06107 Selenicereus undatus HOM05D005688 ORTHO05D006630 3.7e-135 485.3 354 70.1
A10p25100 Brassica napus HOM05D000918 ORTHO05D006630 1.1e-134 483.8 356 65.4
COL.COLO4_27347 Corchorus olitorius HOM05D005688 ORTHO05D006630 2.4e-134 482.6 355 70.7
MBI07_g18747_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 2.4e-134 482.6 350 69.7
CDE05G3530 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 1.6e-133 479.9 347 68.9
Eucgr.B03525 Eucalyptus grandis HOM05D005688 ORTHO05D006630 3.0e-132 475.7 357 68.1
Sabra03G0123400 Salix brachista HOM05D005688 ORTHO05D006630 3.0e-132 475.7 437 60.0
CDE05G2516 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 5.0e-132 474.9 347 68.3
CAN.G163.3 Capsicum annuum HOM05D005688 ORTHO05D006630 1.9e-131 473.0 323 73.7
EL10Ac6g13540 Beta vulgaris HOM05D005688 ORTHO05D006630 1.4e-129 466.8 356 66.6
AUR62028899 Chenopodium quinoa HOM05D005688 ORTHO05D006630 7.5e-128 461.1 353 67.1
ClCG07G015390 Citrullus lanatus HOM05D005688 ORTHO05D006630 1.3e-127 460.3 325 71.4
PSO017G1106 Papaver somniferum HOM05D005688 ORTHO05D006630 2.4e-126 456.1 363 66.7
Sabra01G0042800 Salix brachista HOM05D005688 ORTHO05D006630 2.4e-126 456.1 324 74.4
BcaB01g05377 Brassica carinata HOM05D005688 ORTHO05D006630 4.1e-126 455.3 360 63.6
PSO478G0501 Papaver somniferum HOM05D005688 ORTHO05D006630 7.1e-126 454.5 366 66.1
Psat3g187080 Pisum sativum HOM05D005688 ORTHO05D006630 4.6e-125 451.8 326 71.5
ATR0582G145 Amborella trichopoda HOM05D005688 ORTHO05D006630 2.3e-124 449.5 344 65.1
Sed0011472 Sechium edule HOM05D005688 ORTHO05D006630 3.6e-122 442.2 322 68.9
Ah.03g135940 Amaranthus hybridus HOM05D005688 ORTHO05D006630 2.6e-120 436.0 353 62.9
Os01g0102500 Oryza sativa ssp. japonica HOM05D005688 ORTHO05D006630 7.3e-115 417.9 340 60.6
Zm00001eb127020 Zea mays HOM05D005688 ORTHO05D006630 2.0e-112 409.8 355 56.6
Ah.02g130750 Amaranthus hybridus HOM05D005688 ORTHO05D006630 6.4e-111 404.8 348 59.2
SEGI_34677 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 8.4e-111 404.4 298 65.1
CiPaw.06G105500 Carya illinoinensis HOM05D005688 ORTHO05D006630 1.1e-110 404.1 283 71.7
SEGI_28374 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 1.1e-110 404.1 301 64.8
HPP92_011533 Vanilla planifolia HOM05D005688 ORTHO05D006630 6.0e-109 398.3 317 63.4
Manes.13G008600 Manihot esculenta HOM05D005688 ORTHO05D006630 1.6e-106 390.2 284 70.4
Atru.chr11.2370 Acer truncatum HOM05D005688 ORTHO05D006630 1.1e-105 387.5 284 69.7
HPP92_011539 Vanilla planifolia HOM05D005688 ORTHO05D006630 2.9e-103 379.4 347 57.1
Cpa.g.sc99.54 Carica papaya HOM05D005688 ORTHO05D006630 3.2e-102 375.9 194 91.2
AUR62005654 Chenopodium quinoa HOM05D005688 ORTHO05D006630 3.9e-100 369.0 233 76.8
Cc11_g17240 Coffea canephora HOM05D005688 ORTHO05D006630 3.9e-100 369.0 194 88.7
MBI04_g07882_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 5.1e-100 368.6 343 54.2
Mapoly0015s0197 Marchantia polymorpha HOM05D005688 ORTHO05D006630 4.3e-99 365.5 339 57.2
AagrBONN_evm.TU.Sc2ySwM_340.298 Anthoceros agrestis HOM05D005688 ORTHO05D006630 7.3e-99 364.8 300 59.0
GSVIVG01000906001 Vitis vinifera HOM05D005688 ORTHO05D006630 9.6e-99 364.4 194 88.1
ATR0579G080 Amborella trichopoda HOM05D005688 ORTHO05D006630 3.6e-98 362.5 302 57.3
BcaC04g19152 Brassica carinata HOM05D005688 ORTHO05D006630 4.0e-97 359.0 352 54.8
CBR_g40425 Chara braunii HOM05D005688 ORTHO05D006630 1.5e-96 357.1 292 59.9
SMO367G0614 Selaginella moellendorffii HOM05D005688 ORTHO05D006630 3.3e-91 339.3 299 53.2
unitig_8.g2899 Utricularia gibba HOM05D005688 ORTHO05D006630 5.5e-70 268.9 153 83.0
Actinidia30626 Actinidia chinensis HOM05D001095 ORTHO05D000976 6.9e-65 251.9 210 62.4
Actinidia08051 Actinidia chinensis HOM05D005688 ORTHO05D006630 5.5e-62 242.3 126 88.1
Oeu012651.1 Olea europaea HOM05D005688 ORTHO05D006630 1.8e-60 237.3 200 59.5
unitig_8.g2900 Utricularia gibba HOM05D005688 ORTHO05D006630 7.2e-54 215.3 175 64.6
Actinidia34019 Actinidia chinensis HOM05D005688 ORTHO05D006630 2.3e-52 210.3 331 41.7
Nn4g22254 Nelumbo nucifera HOM05D005688 ORTHO05D006630 6.5e-47 192.2 100 89.0
Actinidia08052 Actinidia chinensis HOM05D005688 ORTHO05D006630 3.1e-41 173.3 128 68.0
Cpa.g.sc99.53 Carica papaya HOM05D005688 ORTHO05D006630 1.9e-38 164.1 136 60.3
Aqoxy1G03766 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 8.3e-34 148.7 137 59.9
GSVIVG01010535001 Vitis vinifera HOM05D005688 ORTHO05D006630 1.8e-33 147.5 101 76.2
VMungo1383G3355 Vigna mungo HOM05D005688 ORTHO05D006630 1.0e-31 141.7 226 42.9
VMungo1215G2942 Vigna mungo HOM05D005688 ORTHO05D006630 3.3e-30 136.7 88 73.9
BcaB03g14943 Brassica carinata HOM05D005688 ORTHO05D006630 2.6e-27 127.1 73 75.3
BcaB07g33260 Brassica carinata HOM05D005688 ORTHO05D006630 4.4e-27 126.3 73 75.3
Ah.02g130760 Amaranthus hybridus HOM05D005688 ORTHO05D006630 2.2e-18 97.4 122 44.3
QL06p005212 Quercus lobata HOM05D005688 ORTHO05D006630 5.2e-12 76.3 41 82.9
Actinidia05457 Actinidia chinensis HOM05D005688 ORTHO05D054920 1.3e-10 71.6 70 60.0


User provided reference genes

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