Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv11620 Davidia involucrata HOM05D008288 ORTHO05D010469 8.8e-114 413.7 217 100.0
CSS0049569 Camellia sinensis var. sinensis HOM05D008288 ORTHO05D010469 1.3e-96 356.7 216 85.6
Hma1.2p1_0000F.1_g000730 Hydrangea macrophylla HOM05D008288 ORTHO05D010469 1.7e-96 356.3 213 87.3
Actinidia22367 Actinidia chinensis HOM05D008288 ORTHO05D010469 3.1e-95 352.1 215 85.1
Thecc.09G149300 Theobroma cacao HOM05D008288 ORTHO05D010469 3.0e-90 335.5 217 79.3
FvH4_2g29591 Fragaria vesca HOM05D008288 ORTHO05D010469 4.4e-89 331.6 216 79.2
Potri.006G251000 Populus trichocarpa HOM05D008288 ORTHO05D010469 5.7e-89 331.3 216 79.2
RcHm_v2.0_Chr6g0298581 Rosa chinensis HOM05D008288 ORTHO05D010469 1.3e-88 330.1 217 78.8
FAN27G1450 Fragaria x ananassa HOM05D008288 ORTHO05D010469 2.9e-88 328.9 217 78.3
MD15G1120900 Malus domestica HOM05D008288 ORTHO05D010469 2.9e-88 328.9 217 77.9
FAN15G2470 Fragaria x ananassa HOM05D008288 ORTHO05D010469 6.4e-88 327.8 217 78.3
MD08G1145200 Malus domestica HOM05D008288 ORTHO05D010469 2.3e-85 319.3 212 77.4
COL.COLO4_23981 Corchorus olitorius HOM05D008288 ORTHO05D010469 3.3e-84 315.5 215 76.3
Prupe.1G473500 Prunus persica HOM05D008288 ORTHO05D010469 1.8e-82 309.7 189 82.5
Gorai.009G050100 Gossypium raimondii HOM05D008288 ORTHO05D010469 4.0e-82 308.5 218 73.4
Gohir.A05G047000 Gossypium hirsutum HOM05D008288 ORTHO05D010469 5.2e-82 308.1 218 72.9
Atru.chr7.2381 Acer truncatum HOM05D008288 ORTHO05D010469 6.8e-82 307.8 217 73.7
Gohir.D05G048766 Gossypium hirsutum HOM05D008288 ORTHO05D010469 8.9e-82 307.4 218 72.9
Duzib150G0406 Durio zibethinus HOM05D008288 ORTHO05D010469 1.5e-81 306.6 214 75.2
TAR625G1133 Trochodendron aralioides HOM05D008288 ORTHO05D010469 7.5e-81 304.3 214 76.2
Nitab4.5_0015147g0010 Nicotiana tabacum HOM05D008288 ORTHO05D010469 6.4e-80 301.2 204 77.5
ClCG05G017080 Citrullus lanatus HOM05D008288 ORTHO05D010469 2.4e-79 299.3 216 72.7
PGR031G1353 Punica granatum HOM05D008288 ORTHO05D010469 4.1e-79 298.5 218 72.5
Sopen08g021110 Solanum pennellii HOM05D008288 ORTHO05D010469 4.1e-79 298.5 221 73.3
TWI34G1005 Tripterygium wilfordii HOM05D008288 ORTHO05D010469 4.1e-79 298.5 205 76.6
CsaV3_3G046560 Cucumis sativus L. HOM05D008288 ORTHO05D010469 2.0e-78 296.2 216 71.8
Peaxi162Scf00341g00011 Petunia axillaris HOM05D008288 ORTHO05D010469 7.8e-78 294.3 209 74.2
Aqoxy7G02071 Aquilegia oxysepala HOM05D008288 ORTHO05D010469 1.3e-77 293.5 217 68.7
Solyc08g067170.3 Solanum lycopersicum HOM05D008288 ORTHO05D010469 3.0e-77 292.4 204 75.0
MELO3C003683.2 Cucumis melo HOM05D008288 ORTHO05D010469 3.9e-77 292.0 217 71.4
QL02p022482 Quercus lobata HOM05D008288 ORTHO05D010469 8.6e-77 290.8 205 75.1
MBI04_g10412_MAGBIO Magnolia biondii HOM05D008288 ORTHO05D010469 1.1e-76 290.4 219 68.9
Sed0020459 Sechium edule HOM05D008288 ORTHO05D010469 1.1e-76 290.4 214 70.6
Ciclev10010324m.g Citrus clementina HOM05D008288 ORTHO05D010469 2.1e-75 286.2 217 69.1
CAN.G348.1 Capsicum annuum HOM05D008288 ORTHO05D010469 4.0e-74 282.0 204 72.1
Cpa.g.sc91.46 Carica papaya HOM05D008288 ORTHO05D010469 1.3e-72 276.9 192 76.6
Nitab4.5_0000151g0060 Nicotiana tabacum HOM05D008288 ORTHO05D010469 1.9e-71 273.1 183 77.0
Phvul.009G095100 Phaseolus vulgaris HOM05D008288 ORTHO05D010469 2.7e-70 269.2 209 69.9
Migut.A00319 Erythranthe guttata HOM05D008288 ORTHO05D010469 7.8e-70 267.7 203 70.4
Eucgr.C01784 Eucalyptus grandis HOM05D008288 ORTHO05D010469 1.7e-69 266.5 217 66.8
DCAR_007695 Daucus carota HOM05D008288 ORTHO05D010469 1.9e-68 263.1 181 81.2
SalBow4G3001 Salvia bowleyana HOM05D008288 ORTHO05D010469 1.9e-68 263.1 202 68.8
VMungo1309G1559 Vigna mungo HOM05D008288 ORTHO05D010469 2.5e-68 262.7 206 68.4
TPR.G31773 Trifolium pratense HOM05D008288 ORTHO05D010469 2.9e-64 249.2 214 64.5
Psat0ss3186g0240 Pisum sativum HOM05D008288 ORTHO05D010469 8.4e-64 247.7 216 63.4
Ca_15724_v3 Cicer arietinum L. HOM05D008288 ORTHO05D010469 1.1e-63 247.3 214 65.4
PSO455G0067 Papaver somniferum HOM05D008288 ORTHO05D010469 2.1e-62 243.0 214 58.9
Medtr3g107650 Medicago truncatula HOM05D008288 ORTHO05D010469 2.3e-61 239.6 213 61.5
Manes.16G119800 Manihot esculenta HOM05D008288 ORTHO05D010469 1.6e-59 233.4 152 77.0
PSO170G5425 Papaver somniferum HOM05D008288 ORTHO05D010469 1.8e-58 229.9 214 58.4
CANSAT54G0155 Cannabis sativa HOM05D008288 ORTHO05D010469 1.5e-57 226.9 192 63.0
Haze_21560 Corylus avellana HOM05D008288 ORTHO05D010469 7.6e-57 224.6 207 63.3
Dinv30173 Davidia involucrata HOM05D008288 ORTHO05D010469 1.6e-54 216.9 217 59.0
Glyma.04G068600 Glycine max HOM05D008288 ORTHO05D010469 3.0e-45 186.0 152 66.4
Cfa013175 Carpinus fangiana HOM05D008288 ORTHO05D010469 9.0e-42 174.5 127 74.8
Lj1g0026401 Lotus japonicus HOM05D008288 ORTHO05D010469 2.6e-41 172.9 149 63.1
Lsat_1_v5_gn_1_45101 Lactuca sativa HOM05D008288 ORTHO05D010469 1.3e-35 154.1 115 71.3
Solyc08g069220.2 Solanum lycopersicum HOM05D008288 ORTHO05D010469 1.5e-25 120.6 82 75.6
ATR0815G056 Amborella trichopoda HOM05D008288 ORTHO05D010469 3.4e-25 119.4 197 38.1
Sopen08g022840 Solanum pennellii HOM05D008288 ORTHO05D010469 3.0e-21 106.3 85 68.2
SEGI_16453 Sequoiadendron giganteum HOM05D008288 ORTHO05D010469 4.6e-14 82.4 164 34.8
Lalb_Chr20g0122541 Lupinus albus HOM05D000215 ORTHO05D007108 1.9e-07 60.5 159 32.7
ClCG11G006020 Citrullus lanatus HOM05D000215 ORTHO05D008904 3.2e-07 59.7 191 27.7
CDE10G0830 Ceratophyllum demersum HOM05D000215 ORTHO05D002239 4.2e-07 59.3 195 27.7
vmacro10024 Vaccinium macrocarpon HOM05D000215 ORTHO05D008904 4.2e-07 59.3 181 29.3
Pp3c26_8290 Physcomitrium patens HOM05D006338 ORTHO05D007946 9.4e-07 58.2 191 29.3
MELO3C008310.2 Cucumis melo HOM05D000215 ORTHO05D008904 1.2e-06 57.8 181 28.2
arahy.Tifrunner.gnm1.ann1.6FWF4F Arachis hypogaea HOM05D000215 ORTHO05D008904 1.6e-06 57.4 124 32.3
arahy.Tifrunner.gnm1.ann1.KX6XMY Arachis hypogaea HOM05D000215 ORTHO05D008904 1.6e-06 57.4 124 32.3
CDE01G0134 Ceratophyllum demersum HOM05D000215 ORTHO05D003454 3.6e-06 56.2 183 26.8
Dinv24588 Davidia involucrata HOM05D000215 ORTHO05D002239 3.6e-06 56.2 142 29.6


User provided reference genes

Program Settings