Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv11595 Davidia involucrata HOM05D007454 ORTHO05D009382 1.4e-62 242.7 117 100.0
Thecc.09G146500 Theobroma cacao HOM05D007454 ORTHO05D009382 3.3e-30 135.2 110 56.4
CSS0001844 Camellia sinensis var. sinensis HOM05D007454 ORTHO05D009382 3.6e-29 131.7 115 54.8
Actinidia13275 Actinidia chinensis HOM05D007454 ORTHO05D009382 4.7e-29 131.3 110 58.2
Gohir.D11G320200 Gossypium hirsutum HOM05D007454 ORTHO05D009382 1.8e-28 129.4 106 54.7
TAR383G0100 Trochodendron aralioides HOM05D007454 ORTHO05D009382 4.0e-28 128.3 108 60.2
Rhsim02G0189300 Rhododendron simsii HOM05D007454 ORTHO05D009382 5.2e-28 127.9 114 57.0
COL.COLO4_24027 Corchorus olitorius HOM05D007454 ORTHO05D009382 8.9e-28 127.1 110 53.6
Actinidia29311 Actinidia chinensis HOM05D007454 ORTHO05D009382 2.6e-27 125.6 109 57.8
Manes.16G117700 Manihot esculenta HOM05D007454 ORTHO05D009382 4.4e-27 124.8 114 57.0
Potri.006G248300 Populus trichocarpa HOM05D007454 ORTHO05D009382 4.4e-27 124.8 112 58.9
Duzib150G0674 Durio zibethinus HOM05D007454 ORTHO05D009382 9.8e-27 123.6 113 51.3
Gorai.007G350400 Gossypium raimondii HOM05D007454 ORTHO05D009382 1.3e-26 123.2 111 52.3
QL12p031592 Quercus lobata HOM05D007454 ORTHO05D009382 1.7e-26 122.9 113 54.9
MD15G1117600 Malus domestica HOM05D007454 ORTHO05D009382 4.9e-26 121.3 109 54.1
Nn2g11862 Nelumbo nucifera HOM05D007454 ORTHO05D009382 8.3e-26 120.6 120 49.2
HanXRQChr01g0030031 Helianthus annuus HOM05D007454 ORTHO05D009382 1.1e-25 120.2 118 51.7
Oeu032495.1 Olea europaea HOM05D007454 ORTHO05D009382 1.1e-25 120.2 111 54.1
FAN27G1093 Fragaria x ananassa HOM05D007454 ORTHO05D009382 1.9e-25 119.4 108 56.5
FvH4_2g29860 Fragaria vesca HOM05D007454 ORTHO05D009382 2.4e-25 119.0 108 55.6
Gohir.A11G304800 Gossypium hirsutum HOM05D007454 ORTHO05D009382 2.4e-25 119.0 111 51.4
FAN20G1122 Fragaria x ananassa HOM05D007454 ORTHO05D009382 4.1e-25 118.2 108 55.6
ECA248G0251 Erigeron canadensis HOM05D007454 ORTHO05D009382 5.4e-25 117.9 116 53.4
Manes.03G018900 Manihot esculenta HOM05D007454 ORTHO05D009382 5.4e-25 117.9 114 56.1
FAN15G1931 Fragaria x ananassa HOM05D007454 ORTHO05D009382 9.2e-25 117.1 107 55.1
RcHm_v2.0_Chr6g0298931 Rosa chinensis HOM05D007454 ORTHO05D009382 9.2e-25 117.1 108 53.7
TAR626G1515 Trochodendron aralioides HOM05D007454 ORTHO05D009382 9.2e-25 117.1 108 54.6
Nitab4.5_0003201g0010 Nicotiana tabacum HOM05D007454 ORTHO05D009382 1.2e-24 116.7 106 54.7
Sabra06G0194300 Salix brachista HOM05D007454 ORTHO05D009382 1.6e-24 116.3 112 55.4
Atru.chr7.2345 Acer truncatum HOM05D007454 ORTHO05D009382 3.5e-24 115.2 125 50.4
Lsat_1_v5_gn_1_45380 Lactuca sativa HOM05D007454 ORTHO05D009382 4.6e-24 114.8 116 51.7
Nitab4.5_0000125g0360 Nicotiana tabacum HOM05D007454 ORTHO05D009382 7.8e-24 114.0 113 51.3
TWI34G0809 Tripterygium wilfordii HOM05D007454 ORTHO05D009382 7.8e-24 114.0 118 50.8
CiPaw.08G014500 Carya illinoinensis HOM05D007454 ORTHO05D009382 1.0e-23 113.6 125 48.0
Migut.A00288 Erythranthe guttata HOM05D007454 ORTHO05D009382 2.3e-23 112.5 113 49.6
FAN24G1693 Fragaria x ananassa HOM05D007454 ORTHO05D009382 6.6e-23 110.9 108 51.9
CAN.G506.13 Capsicum annuum HOM05D007454 ORTHO05D009382 1.9e-22 109.4 113 51.3
Haze_21608 Corylus avellana HOM05D007454 ORTHO05D009382 2.5e-22 109.0 108 55.6
PGSC0003DMG400002261 Solanum tuberosum HOM05D007454 ORTHO05D009382 2.5e-22 109.0 116 49.1
Cfa013203 Carpinus fangiana HOM05D007454 ORTHO05D009382 9.5e-22 107.1 106 53.8
Solyc08g067630.3 Solanum lycopersicum HOM05D007454 ORTHO05D009382 1.6e-21 106.3 116 49.1
Cc11_g01380 Coffea canephora HOM05D007454 ORTHO05D009382 2.8e-21 105.5 117 47.9
Prupe.1G471000 Prunus persica HOM05D007454 ORTHO05D009382 4.7e-21 104.8 111 49.5
CiPaw.07G219000 Carya illinoinensis HOM05D007454 ORTHO05D009382 5.2e-20 101.3 106 51.9
Ciclev10009811m.g Citrus clementina HOM05D007454 ORTHO05D009382 5.2e-20 101.3 116 49.1
MD08G1140700 Malus domestica HOM05D007454 ORTHO05D009382 1.5e-19 99.8 110 49.1
DCAR_001472 Daucus carota HOM05D007454 ORTHO05D009382 2.0e-19 99.4 93 48.4
EL10Ac2g02557 Beta vulgaris HOM05D007454 ORTHO05D009382 7.5e-19 97.4 101 49.5
Glyma.06G072000 Glycine max HOM05D007454 ORTHO05D009382 9.8e-19 97.1 118 47.5
Aqoxy7G01923 Aquilegia oxysepala HOM05D007454 ORTHO05D009382 8.3e-18 94.0 115 46.1
Cpa.g.sc603.1 Carica papaya HOM05D007454 ORTHO05D009382 1.1e-17 93.6 104 43.3
Hund25693 Selenicereus undatus HOM05D007454 ORTHO05D009382 1.1e-17 93.6 118 45.8
Sed0012550 Sechium edule HOM05D007454 ORTHO05D009382 7.0e-17 90.9 123 44.7
MELO3C011223.2 Cucumis melo HOM05D007454 ORTHO05D009382 9.2e-17 90.5 101 43.6
unitig_748.g8205 Utricularia gibba HOM05D007454 ORTHO05D009382 1.2e-16 90.1 107 42.1
Glyma.04G070000 Glycine max HOM05D007454 ORTHO05D009382 2.1e-16 89.4 119 46.2
ClCG05G017140 Citrullus lanatus HOM05D007454 ORTHO05D009382 3.5e-16 88.6 115 45.2
Eucgr.C01807 Eucalyptus grandis HOM05D007454 ORTHO05D009382 4.6e-16 88.2 106 49.1
Sed0003243 Sechium edule HOM05D007454 ORTHO05D009382 4.6e-16 88.2 113 39.8
Phvul.009G096400 Phaseolus vulgaris HOM05D007454 ORTHO05D009382 1.7e-15 86.3 119 45.4
Sopen08g021580 Solanum pennellii HOM05D007454 ORTHO05D009382 1.7e-15 86.3 103 49.5
MELO3C003676.2 Cucumis melo HOM05D007454 ORTHO05D009382 2.3e-15 85.9 119 44.5
SalBow4G3079 Salvia bowleyana HOM05D007454 ORTHO05D009382 3.0e-15 85.5 77 54.5
THA.LOC104803822 Tarenaya hassleriana HOM05D007454 ORTHO05D009382 3.9e-15 85.1 113 44.2
CsaV3_3G046620 Cucumis sativus L. HOM05D007454 ORTHO05D009382 6.6e-15 84.3 127 41.7
VMungo1309G0733 Vigna mungo HOM05D007454 ORTHO05D009382 1.1e-14 83.6 116 44.8
Lj1g0018180 Lotus japonicus HOM05D007454 ORTHO05D009382 1.9e-14 82.8 135 40.0
CsaV3_2G031720 Cucumis sativus L. HOM05D007454 ORTHO05D009382 4.3e-14 81.6 98 40.8
Sc09g0008740 Simmondsia chinensis HOM05D007454 ORTHO05D009382 5.6e-14 81.3 103 46.6
arahy.Tifrunner.gnm1.ann1.X4UCF1 Arachis hypogaea HOM05D007454 ORTHO05D009382 7.3e-14 80.9 120 40.8
ClCG08G012990 Citrullus lanatus HOM05D007454 ORTHO05D009382 2.8e-13 79.0 106 38.7
CDE07G1568 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 8.1e-13 77.4 111 41.4
Lalb_Chr23g0268861 Lupinus albus HOM05D007454 ORTHO05D009382 8.1e-13 77.4 123 42.3
Medtr3g107890 Medicago truncatula HOM05D007454 ORTHO05D009382 8.1e-13 77.4 124 41.9
Zm00001eb296620 Zea mays HOM05D007454 ORTHO05D009382 1.4e-12 76.6 114 37.7
AL4G17110 Arabidopsis lyrata HOM05D007454 ORTHO05D009382 3.1e-12 75.5 118 40.7
arahy.Tifrunner.gnm1.ann1.AC8RV3 Arachis hypogaea HOM05D007454 ORTHO05D009382 3.1e-12 75.5 124 37.9
PSO017G6963 Papaver somniferum HOM05D007454 ORTHO05D009382 4.0e-12 75.1 120 45.8
PSO170G5517 Papaver somniferum HOM05D007454 ORTHO05D009382 6.8e-12 74.3 120 45.0
AT2G25625 Arabidopsis thaliana HOM05D007454 ORTHO05D009382 1.2e-11 73.6 117 39.3
Sp4g05200 Schrenkiella parvula HOM05D007454 ORTHO05D009382 1.5e-11 73.2 111 40.5
BcaC02g08336 Brassica carinata HOM05D007454 ORTHO05D009382 2.0e-11 72.8 67 58.2
C04p55570 Brassica napus HOM05D007454 ORTHO05D009382 2.0e-11 72.8 67 58.2
BolC4t27081H Brassica oleracea HOM05D007454 ORTHO05D009382 2.0e-11 72.8 67 58.2
Ca_15708_v3 Cicer arietinum L. HOM05D007454 ORTHO05D009382 3.4e-11 72.0 128 39.8
Thhalv10000347m.g Eutrema salsugineum HOM05D007454 ORTHO05D009382 3.4e-11 72.0 113 42.5
BcaB06g28081 Brassica carinata HOM05D007454 ORTHO05D009382 4.4e-11 71.6 111 40.5
A04p19830 Brassica napus HOM05D007454 ORTHO05D009382 4.4e-11 71.6 67 56.7
BraA04t17571Z Brassica rapa HOM05D007454 ORTHO05D009382 4.4e-11 71.6 67 56.7
Carub.0004s0541 Capsella rubella HOM05D007454 ORTHO05D009382 4.4e-11 71.6 90 46.7
Aa31LG1G8530 Aethionema arabicum HOM05D007454 ORTHO05D009382 5.8e-11 71.2 81 43.2
MBI01_g03566_MAGBIO Magnolia biondii HOM05D007454 ORTHO05D009382 7.5e-11 70.9 116 38.8
CARHR115660 Cardamine hirsuta HOM05D007454 ORTHO05D009382 1.7e-10 69.7 129 36.4
TPR.G27330 Trifolium pratense HOM05D007454 ORTHO05D009382 2.2e-10 69.3 66 54.5
CDE06G2386 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 2.9e-10 68.9 83 44.6
Psat5g027000 Pisum sativum HOM05D007454 ORTHO05D009382 3.7e-10 68.6 91 46.2
CANSAT11G0218 Cannabis sativa HOM05D007454 ORTHO05D009382 6.4e-10 67.8 70 48.6
Os05g0575000 Oryza sativa ssp. japonica HOM05D007454 ORTHO05D009382 1.4e-09 66.6 36 72.2
CDE06G2168 Ceratophyllum demersum HOM05D007454 ORTHO05D009382 2.4e-09 65.9 58 51.7
Sed0011711 Sechium edule HOM05D007454 ORTHO05D009382 2.4e-09 65.9 77 39.0
TPR.G34694 Trifolium pratense HOM05D007454 ORTHO05D009382 2.1e-08 62.8 39 71.8
ATR0083G010 Amborella trichopoda HOM05D007454 ORTHO05D009382 5.1e-07 58.2 80 36.2
ATR0260G001 Amborella trichopoda HOM05D007454 ORTHO05D009382 2.5e-06 55.8 73 38.4


User provided reference genes

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