Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv11566 Davidia involucrata HOM05D008850 ORTHO05D004107 1.2e-80 303.1 144 100.0
Dinv40403 Davidia involucrata HOM05D008850 ORTHO05D004107 8.6e-34 147.5 89 85.4
Dinv05613 Davidia involucrata HOM05D008850 ORTHO05D004107 1.2e-32 143.7 85 75.3
Dinv01152 Davidia involucrata HOM05D008850 ORTHO05D004107 6.1e-32 141.4 215 41.9
Dinv12898 Davidia involucrata HOM05D008850 ORTHO05D004107 4.0e-31 138.7 98 77.6
Dinv12394 Davidia involucrata HOM05D008850 ORTHO05D004107 3.0e-26 122.5 70 77.1
Dinv18502 Davidia involucrata HOM05D008850 ORTHO05D004107 8.6e-26 120.9 194 40.2
Dinv21773 Davidia involucrata HOM05D008850 ORTHO05D004107 6.8e-23 111.3 189 39.7
Hma1.2p1_0133F.1_g061350 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.9e-20 103.2 178 37.1
Hma1.2p1_0400F.1_g144590 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.2e-20 102.4 178 36.5
Hma1.2p1_0185F.1_g081470 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.2e-16 88.2 143 37.1
Dinv11430 Davidia involucrata HOM05D008850 ORTHO05D004107 2.3e-15 86.3 94 48.9
Hma1.2p1_0060F.1_g032860 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.8e-15 84.7 160 33.1
CSS0012068 Camellia sinensis var. sinensis HOM05D000793 ORTHO05D000783 3.7e-13 79.0 150 32.7
CSS0040604 Camellia sinensis var. sinensis HOM05D000793 ORTHO05D000783 3.7e-13 79.0 150 32.7
Hma1.2p1_0071F.1_g038190 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 8.3e-13 77.8 157 31.8
CSS0024995 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 1.1e-12 77.4 147 34.7
Hma1.2p1_0199F.1_g085640 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.1e-12 77.4 69 46.4
Hma1.2p1_0512F.1_g169320 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.9e-12 76.6 82 47.6
Dinv17963 Davidia involucrata HOM05D008850 ORTHO05D004107 3.2e-12 75.9 68 52.9
Dinv37592 Davidia involucrata HOM05D001916 ORTHO05D003272 5.4e-12 75.1 68 51.5
Hma1.2p1_0181F.1_g079980 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.6e-11 73.6 68 50.0
Dinv05208 Davidia involucrata HOM05D008850 ORTHO05D004107 3.5e-11 72.4 91 42.9
Dinv24545 Davidia involucrata HOM05D008850 ORTHO05D004107 1.0e-10 70.9 99 40.4
Hma1.2p1_0014F.1_g010150 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.3e-10 70.5 68 48.5
Dinv41030 Davidia involucrata HOM05D009581 ORTHO05D004107 1.5e-09 67.0 65 46.2
Dinv22994 Davidia involucrata HOM05D009809 ORTHO05D004107 7.3e-09 64.7 64 46.9
Lj8C477G0 Lonicera japonica HOM05D016084 ORTHO05D004107 9.5e-09 64.3 70 41.4
Dinv15984 Davidia involucrata HOM05D008850 ORTHO05D004107 1.6e-08 63.5 85 44.7
FvH4_2g00550 Fragaria vesca HOM05D000005 ORTHO05D000012 1.6e-08 63.5 95 34.7
Hma1.2p1_1076F.1_g254590 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.1e-08 63.2 68 38.2
Hma1.2p1_2684F.1_g326900 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.8e-08 62.8 66 43.9
Dinv39745 Davidia involucrata HOM05D009581 ORTHO05D004107 3.6e-08 62.4 65 41.5
Dinv03803 Davidia involucrata HOM05D009581 ORTHO05D004107 4.7e-08 62.0 65 43.1
Dinv31185 Davidia involucrata HOM05D008850 ORTHO05D004107 6.2e-08 61.6 155 32.9
Dinv09483 Davidia involucrata HOM05D012890 ORTHO05D004107 8.1e-08 61.2 69 42.0
Dinv14600 Davidia involucrata HOM05D019159 ORTHO05D004107 8.1e-08 61.2 65 46.2
RhsimUnG0208000 Rhododendron simsii HOM05D008850 ORTHO05D004107 8.1e-08 61.2 66 37.9
Dinv22791 Davidia involucrata HOM05D000017 ORTHO05D000013 1.1e-07 60.8 81 40.7
Dinv31502 Davidia involucrata HOM05D025573 ORTHO05D004107 1.1e-07 60.8 121 33.1
Dinv09177 Davidia involucrata HOM05D019159 ORTHO05D004107 1.4e-07 60.5 113 38.1
Dinv15380 Davidia involucrata HOM05D009581 ORTHO05D004107 1.4e-07 60.5 65 43.1
ECA247G2333 Erigeron canadensis HOM05D000017 ORTHO05D004107 1.4e-07 60.5 91 33.0
Rhsim02G0022000 Rhododendron simsii HOM05D009581 ORTHO05D004107 1.4e-07 60.5 73 38.4
Dinv17061 Davidia involucrata HOM05D001632 ORTHO05D001534 1.8e-07 60.1 66 42.4
Dinv43005 Davidia involucrata HOM05D001632 ORTHO05D001534 1.8e-07 60.1 66 42.4
Dinv43092 Davidia involucrata HOM05D001632 ORTHO05D001534 1.8e-07 60.1 66 42.4
ECA236G1612 Erigeron canadensis HOM05D000017 ORTHO05D000013 3.1e-07 59.3 69 39.1
Rhsim06G0115000 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.1e-07 59.3 67 41.8
Dinv13743 Davidia involucrata HOM05D012890 ORTHO05D011043 4.0e-07 58.9 69 40.6
Prupe.4G046500 Prunus persica HOM05D000017 ORTHO05D000013 4.0e-07 58.9 62 41.9
Rhsim05G0009400 Rhododendron simsii HOM05D000017 ORTHO05D000013 4.0e-07 58.9 67 41.8
FAN24G0435 Fragaria x ananassa HOM05D008813 ORTHO05D010456 6.8e-07 58.2 93 33.3
Rhsim12G0183900 Rhododendron simsii HOM05D009581 ORTHO05D004107 6.8e-07 58.2 69 39.1
FAN02G0012 Fragaria x ananassa HOM05D008813 ORTHO05D010456 8.9e-07 57.8 95 33.7
Rhsim04G0035600 Rhododendron simsii HOM05D000054 ORTHO05D000171 8.9e-07 57.8 75 37.3
Rhsim11G0046200 Rhododendron simsii HOM05D000017 ORTHO05D000013 8.9e-07 57.8 149 30.2
DCAR_012597 Daucus carota HOM05D023779 ORTHO05D004107 1.2e-06 57.4 103 31.1
Dinv12297 Davidia involucrata HOM05D000061 ORTHO05D000915 1.2e-06 57.4 116 35.3
Dinv08419 Davidia involucrata HOM05D025573 ORTHO05D004107 1.5e-06 57.0 115 35.7
Dinv13277 Davidia involucrata HOM05D014922 ORTHO05D004107 1.5e-06 57.0 60 40.0
Hma1.2p1_0184F.1_g081220 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.5e-06 57.0 63 36.5
Rhsim01G0019400 Rhododendron simsii HOM05D008850 ORTHO05D004107 1.5e-06 57.0 137 29.9
RcHm_v2.0_Chr1g0352511 Rosa chinensis HOM05D000017 ORTHO05D000013 1.5e-06 57.0 98 32.7
SGA_v2.0_scaffold57G20302 Striga asiatica HOM05D017547 ORTHO05D014211 1.5e-06 57.0 81 38.3
DCAR_017137 Daucus carota HOM05D037401 ORTHO05D004107 2.0e-06 56.6 93 33.3
Dinv14622 Davidia involucrata HOM05D015629 ORTHO05D004107 2.0e-06 56.6 68 35.3
Hma1.2p1_0525F.1_g172635 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.6e-06 56.2 60 40.0
Hma1.2p1_0973F.1_g242990 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.6e-06 56.2 60 40.0
QL10p022804 Quercus lobata HOM05D000017 ORTHO05D000013 2.6e-06 56.2 68 36.8
Dinv22944 Davidia involucrata HOM05D000017 ORTHO05D004107 3.4e-06 55.8 81 39.5
RcHm_v2.0_Chr5g0079631 Rosa chinensis HOM05D008813 ORTHO05D010456 3.4e-06 55.8 98 32.7
DCAR_022427 Daucus carota HOM05D040464 ORTHO05D035013 4.4e-06 55.5 130 30.8
Dinv39679 Davidia involucrata HOM05D000020 ORTHO05D004107 4.4e-06 55.5 39 64.1
Hma1.2p1_0192F.1_g083640 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.4e-06 55.5 61 37.7
Rhsim13G0199100 Rhododendron simsii HOM05D000017 ORTHO05D000013 4.4e-06 55.5 101 30.7
Dinv23671 Davidia involucrata HOM05D012890 ORTHO05D004107 5.8e-06 55.1 63 34.9
ECA247G3881 Erigeron canadensis HOM05D005921 ORTHO05D007374 5.8e-06 55.1 75 36.0
Ah.10g025880 Amaranthus hybridus HOM05D009581 ORTHO05D004107 7.6e-06 54.7 63 38.1
Dinv02870 Davidia involucrata HOM05D008850 ORTHO05D004107 7.6e-06 54.7 44 63.6
Dinv39706 Davidia involucrata HOM05D008850 ORTHO05D004107 7.6e-06 54.7 32 78.1
QL09p032027 Quercus lobata HOM05D000017 ORTHO05D000013 7.6e-06 54.7 66 36.4
Rhsim02G0014700 Rhododendron simsii HOM05D000017 ORTHO05D000013 7.6e-06 54.7 66 36.4
Rhsim12G0081600 Rhododendron simsii HOM05D000709 ORTHO05D002401 7.6e-06 54.7 66 36.4
Dinv09198 Davidia involucrata HOM05D000606 ORTHO05D001265 9.9e-06 54.3 48 45.8
FAN16G3596 Fragaria x ananassa HOM05D008813 ORTHO05D010456 9.9e-06 54.3 89 34.8


User provided reference genes

Program Settings