Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv11496 Davidia involucrata HOM05D006813 ORTHO05D008657 2.2e-196 688.7 339 100.0
CSS0034099 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 8.3e-135 484.2 318 77.7
CSS0013443 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 8.9e-129 464.2 312 75.6
Actinidia06110 Actinidia chinensis HOM05D006813 ORTHO05D008657 3.7e-127 458.8 311 76.5
Actinidia01957 Actinidia chinensis HOM05D006813 ORTHO05D008657 3.5e-125 452.2 311 75.6
TAR371G1040 Trochodendron aralioides HOM05D006813 ORTHO05D008657 7.8e-125 451.1 312 74.0
Haze_14484 Corylus avellana HOM05D006813 ORTHO05D008657 8.6e-124 447.6 315 74.0
QL02p085115 Quercus lobata HOM05D006813 ORTHO05D008657 1.5e-123 446.8 329 71.7
Cfa007604 Carpinus fangiana HOM05D006813 ORTHO05D008657 3.1e-121 439.1 315 72.7
MD09G1056700 Malus domestica HOM05D006813 ORTHO05D008657 3.1e-121 439.1 307 70.7
Nn4g23302 Nelumbo nucifera HOM05D006813 ORTHO05D008657 5.8e-120 434.9 312 70.8
Ciclev10013781m.g Citrus clementina HOM05D006813 ORTHO05D008657 1.7e-119 433.3 299 72.6
Nitab4.5_0001591g0010 Nicotiana tabacum HOM05D006813 ORTHO05D008657 4.1e-118 428.7 287 72.8
DCAR_025399 Daucus carota HOM05D006813 ORTHO05D008657 1.6e-117 426.8 284 74.3
GSVIVG01011472001 Vitis vinifera HOM05D006813 ORTHO05D008657 2.3e-116 422.9 314 68.8
Rhsim10G0035200 Rhododendron simsii HOM05D006813 ORTHO05D008657 5.0e-116 421.8 327 68.5
Nitab4.5_0000568g0240 Nicotiana tabacum HOM05D006813 ORTHO05D008657 6.6e-116 421.4 280 73.6
MD17G1054200 Malus domestica HOM05D006813 ORTHO05D008657 1.9e-115 419.9 334 65.0
Manes.02G049900 Manihot esculenta HOM05D006813 ORTHO05D008657 1.9e-115 419.9 314 69.1
PGSC0003DMG400001435 Solanum tuberosum HOM05D006813 ORTHO05D008657 7.3e-115 417.9 313 67.1
CiPaw.03G021100 Carya illinoinensis HOM05D006813 ORTHO05D008657 1.2e-114 417.2 316 69.9
RcHm_v2.0_Chr2g0166981 Rosa chinensis HOM05D006813 ORTHO05D008657 1.6e-114 416.8 308 67.9
EL10Ac2g03036 Beta vulgaris HOM05D006813 ORTHO05D008657 2.1e-114 416.4 320 65.0
Sabra04G0067300 Salix brachista HOM05D006813 ORTHO05D008657 3.6e-114 415.6 291 73.2
FvH4_6g47790 Fragaria vesca HOM05D006813 ORTHO05D008657 8.1e-114 414.5 307 68.4
FAN14G3538 Fragaria x ananassa HOM05D006813 ORTHO05D008657 8.1e-114 414.5 307 68.4
Potri.004G120900 Populus trichocarpa HOM05D006813 ORTHO05D008657 8.1e-114 414.5 293 73.7
Sc14g0006120 Simmondsia chinensis HOM05D006813 ORTHO05D008657 5.2e-113 411.8 287 68.6
TWI34G0739 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 2.0e-112 409.8 312 69.2
Lju41A8T104 Lonicera japonica HOM05D006813 ORTHO05D008657 5.8e-112 408.3 318 67.9
TWI34G0213 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 5.8e-112 408.3 312 69.6
Lsat_1_v5_gn_4_170001 Lactuca sativa HOM05D006813 ORTHO05D008657 7.5e-112 407.9 284 72.9
Solyc02g088350.4 Solanum lycopersicum HOM05D006813 ORTHO05D008657 1.3e-111 407.1 282 71.6
MSTRG.3341 Avicennia marina HOM05D006813 ORTHO05D008657 2.2e-111 406.4 296 69.9
PGR004G2573 Punica granatum HOM05D006813 ORTHO05D008657 2.9e-111 406.0 324 66.0
Sopen02g033040 Solanum pennellii HOM05D006813 ORTHO05D008657 2.9e-111 406.0 282 70.6
MBI07_g46965_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 1.4e-110 403.7 304 69.1
CAN.G206.184 Capsicum annuum HOM05D006813 ORTHO05D008657 1.9e-110 403.3 285 69.1
Cc07_g03730 Coffea canephora HOM05D006813 ORTHO05D008657 2.4e-110 402.9 319 66.5
vmacro05678 Vaccinium macrocarpon HOM05D006813 ORTHO05D008657 4.1e-110 402.1 319 67.4
Thecc.04G088600 Theobroma cacao HOM05D006813 ORTHO05D008657 7.1e-110 401.4 313 65.2
AUR62034457 Chenopodium quinoa HOM05D006813 ORTHO05D008657 9.2e-110 401.0 318 64.8
Oeu023718.1 Olea europaea HOM05D006813 ORTHO05D008657 1.2e-109 400.6 301 68.1
Dinv33795 Davidia involucrata HOM05D006813 ORTHO05D008657 1.6e-109 400.2 213 91.5
Migut.K01297 Erythranthe guttata HOM05D006813 ORTHO05D008657 2.1e-109 399.8 318 64.5
SalBow1G5727 Salvia bowleyana HOM05D006813 ORTHO05D008657 2.1e-109 399.8 318 65.4
Atru.chr8.345 Acer truncatum HOM05D006813 ORTHO05D008657 4.6e-109 398.7 274 72.3
THA.LOC104805490 Tarenaya hassleriana HOM05D006813 ORTHO05D008657 1.3e-108 397.1 311 64.3
FAN05G4860 Fragaria x ananassa HOM05D006813 ORTHO05D008657 8.6e-108 394.4 336 61.9
ECA232G0359 Erigeron canadensis HOM05D006813 ORTHO05D008657 2.5e-107 392.9 260 72.3
Gorai.012G051400 Gossypium raimondii HOM05D006813 ORTHO05D008657 3.3e-107 392.5 313 63.6
Gohir.D04G046200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 9.5e-107 391.0 313 63.6
CANSAT64G1527 Cannabis sativa HOM05D006813 ORTHO05D008657 1.2e-106 390.6 287 70.0
ATR0730G176 Amborella trichopoda HOM05D006813 ORTHO05D008657 6.2e-106 388.3 252 75.4
SalBow1G0723 Salvia bowleyana HOM05D006813 ORTHO05D008657 1.1e-105 387.5 319 63.9
Gohir.A05G369200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 1.4e-105 387.1 280 68.2
Glyma.19G026800 Glycine max HOM05D006813 ORTHO05D008657 4.0e-105 385.6 270 70.0
AT3G29185 Arabidopsis thaliana HOM05D006813 ORTHO05D008657 5.2e-105 385.2 286 66.4
Aqoxy3G03517 Aquilegia oxysepala HOM05D006813 ORTHO05D008657 1.5e-104 383.6 244 76.2
AL5G19100 Arabidopsis lyrata HOM05D006813 ORTHO05D008657 1.5e-104 383.6 281 67.6
ClCG11G004590 Citrullus lanatus HOM05D006813 ORTHO05D008657 1.5e-104 383.6 315 66.3
Glyma.13G060100 Glycine max HOM05D006813 ORTHO05D008657 2.0e-104 383.3 282 68.1
Lalb_Chr02g0159111 Lupinus albus HOM05D006813 ORTHO05D008657 2.6e-104 382.9 267 70.8
Duzib264G0095 Durio zibethinus HOM05D006813 ORTHO05D008657 9.9e-104 380.9 287 67.6
HanXRQChr09g0264041 Helianthus annuus HOM05D006813 ORTHO05D008657 2.9e-103 379.4 273 68.9
arahy.Tifrunner.gnm1.ann1.GGC6H3 Arachis hypogaea HOM05D006813 ORTHO05D008657 3.8e-103 379.0 311 64.0
VMungo0464G0720 Vigna mungo HOM05D006813 ORTHO05D008657 4.9e-103 378.6 300 65.3
SGA_v2.0_scaffold154G37082 Striga asiatica HOM05D006813 ORTHO05D008657 8.4e-103 377.9 306 64.7
arahy.Tifrunner.gnm1.ann1.DSSH0H Arachis hypogaea HOM05D006813 ORTHO05D008657 1.4e-102 377.1 311 64.0
Thhalv10004355m.g Eutrema salsugineum HOM05D006813 ORTHO05D008657 1.9e-102 376.7 254 69.7
Medtr6g013150 Medicago truncatula HOM05D006813 ORTHO05D008657 4.2e-102 375.6 270 68.5
Phvul.004G032400 Phaseolus vulgaris HOM05D006813 ORTHO05D008657 9.2e-102 374.4 273 70.3
MELO3C022015.2 Cucumis melo HOM05D006813 ORTHO05D008657 1.2e-101 374.0 275 68.7
Sp2g17800 Schrenkiella parvula HOM05D006813 ORTHO05D008657 1.2e-101 374.0 297 63.3
Lj2g0012161 Lotus japonicus HOM05D006813 ORTHO05D008657 1.6e-101 373.6 296 65.2
C07p38090 Brassica napus HOM05D006813 ORTHO05D008657 7.8e-101 371.3 285 63.2
BolC7t44331H Brassica oleracea HOM05D006813 ORTHO05D008657 7.8e-101 371.3 285 63.2
CsaV3_5G038340 Cucumis sativus L. HOM05D006813 ORTHO05D008657 7.8e-101 371.3 283 67.1
Hund13179 Selenicereus undatus HOM05D006813 ORTHO05D008657 7.8e-101 371.3 293 64.5
BcaC06g33677 Brassica carinata HOM05D006813 ORTHO05D008657 3.9e-100 369.0 287 62.7
BcaC06g30887 Brassica carinata HOM05D006813 ORTHO05D008657 1.9e-99 366.7 288 62.5
CDE04G0700 Ceratophyllum demersum HOM05D006813 ORTHO05D008657 3.3e-99 365.9 269 66.5
Psat1g069960 Pisum sativum HOM05D006813 ORTHO05D008657 3.3e-99 365.9 303 63.0
A06p40070 Brassica napus HOM05D006813 ORTHO05D008657 9.6e-99 364.4 285 62.1
BraA06t26922Z Brassica rapa HOM05D006813 ORTHO05D008657 9.6e-99 364.4 285 62.1
AUR62018125 Chenopodium quinoa HOM05D006813 ORTHO05D008657 6.2e-98 361.7 231 77.1
Peaxi162Scf00166g00933 Petunia axillaris HOM05D006813 ORTHO05D008657 8.1e-98 361.3 221 77.4
HPP92_015887 Vanilla planifolia HOM05D006813 ORTHO05D008657 8.1e-98 361.3 270 66.3
PSO063G1088 Papaver somniferum HOM05D006813 ORTHO05D008657 1.8e-97 360.1 251 69.7
Aa31LG2G4040 Aethionema arabicum HOM05D006813 ORTHO05D008657 2.4e-97 359.8 305 60.0
PSO063G3583 Papaver somniferum HOM05D006813 ORTHO05D008657 1.5e-96 357.1 250 69.6
COL.COLO4_12242 Corchorus olitorius HOM05D006813 ORTHO05D008657 2.0e-96 356.7 221 76.9
MBI07_g25549_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 7.6e-96 354.8 303 64.0
unitig_0.g2631 Utricularia gibba HOM05D004633 ORTHO05D005503 2.1e-93 346.7 331 57.4
Zm00001eb057930 Zea mays HOM05D006813 ORTHO05D008657 2.3e-92 343.2 248 67.7
Os03g0758900 Oryza sativa ssp. japonica HOM05D006813 ORTHO05D008657 4.3e-91 339.0 247 64.8
CARHR152350 Cardamine hirsuta HOM05D006813 ORTHO05D008657 3.3e-83 312.8 312 55.8
TPR.G26959 Trifolium pratense HOM05D006813 ORTHO05D008657 1.2e-80 304.3 195 75.4
Zm00001eb214510 Zea mays HOM05D006813 ORTHO05D008657 1.2e-80 304.3 317 53.3
SEGI_06128 Sequoiadendron giganteum HOM05D006813 ORTHO05D008657 6.9e-73 278.5 269 52.8
Prupe.3G262000 Prunus persica HOM05D006813 ORTHO05D008657 3.2e-70 269.6 151 82.8
Carub.0005s0792 Capsella rubella HOM05D006813 ORTHO05D008657 9.0e-65 251.5 159 73.6
Mapoly0015s0143 Marchantia polymorpha HOM05D006813 ORTHO05D008657 4.6e-61 239.2 292 42.1
Sed0010301 Sechium edule HOM05D006813 ORTHO05D008657 4.6e-61 239.2 165 69.1
Pp3c27_2000 Physcomitrium patens HOM05D006813 ORTHO05D008657 1.5e-59 234.2 259 44.0
Ca_04860_v3 Cicer arietinum L. HOM05D006813 ORTHO05D002040 3.4e-56 223.0 297 45.5
SMO347G0068 Selaginella moellendorffii HOM05D006813 ORTHO05D008657 5.5e-46 189.1 248 36.7
Haze_14493 Corylus avellana HOM05D006813 ORTHO05D008657 4.7e-45 186.0 152 63.2
MD09G1057100 Malus domestica HOM05D006813 ORTHO05D008657 1.8e-41 174.1 158 58.2
AagrBONN_evm.TU.Sc2ySwM_117.3657 Anthoceros agrestis HOM05D006813 ORTHO05D008657 3.1e-41 173.3 214 42.5
HPP92_015897 Vanilla planifolia HOM05D006813 ORTHO05D008657 1.2e-32 144.8 112 64.3
FAN10G0034 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.2e-31 140.6 89 71.9
HPP92_015898 Vanilla planifolia HOM05D006813 ORTHO05D008657 1.6e-21 107.8 95 55.8
HanXRQChr08g0223741 Helianthus annuus HOM05D006813 ORTHO05D008657 8.0e-21 105.5 80 62.5
TAR633G2432 Trochodendron aralioides HOM05D006813 ORTHO05D414814 2.4e-17 94.0 93 54.8
BcaC06g30885 Brassica carinata HOM05D006813 ORTHO05D008657 3.9e-15 86.7 84 50.0
Haze_14448 Corylus avellana HOM05D006813 ORTHO05D008657 2.2e-10 70.9 135 43.0


User provided reference genes

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