Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv11487 Davidia involucrata HOM05D005960 ORTHO05D007537 6.5e-185 650.6 330 100.0
Lj4C116G4 Lonicera japonica HOM05D005960 ORTHO05D007537 1.3e-148 530.0 330 80.6
GSVIVG01011490001 Vitis vinifera HOM05D005960 ORTHO05D007537 1.9e-147 526.2 314 87.9
TAR371G0518 Trochodendron aralioides HOM05D005960 ORTHO05D007537 3.5e-146 521.9 309 85.4
Actinidia01975 Actinidia chinensis HOM05D005960 ORTHO05D007537 1.0e-145 520.4 319 85.9
Cfa007624 Carpinus fangiana HOM05D005960 ORTHO05D007537 7.3e-144 514.2 315 83.8
Hma1.2p1_3044F.1_g332080 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 9.5e-144 513.8 312 86.2
Atru.chr8.386 Acer truncatum HOM05D005960 ORTHO05D007537 8.0e-143 510.8 315 83.2
CSS0003743 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 3.1e-142 508.8 315 85.7
CSS0005506 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 3.1e-142 508.8 315 85.7
vmacro05665 Vaccinium macrocarpon HOM05D005960 ORTHO05D007537 5.2e-142 508.1 309 85.1
Cpa.g.sc14.144 Carica papaya HOM05D005960 ORTHO05D007537 1.3e-140 503.4 311 82.0
Oeu000854.1 Olea europaea HOM05D005960 ORTHO05D007537 2.9e-140 502.3 311 81.7
Rhsim10G0047200 Rhododendron simsii HOM05D005960 ORTHO05D007537 6.4e-140 501.1 330 79.1
Manes.01G099100 Manihot esculenta HOM05D005960 ORTHO05D007537 1.1e-139 500.4 315 81.6
CiPaw.04G058500 Carya illinoinensis HOM05D005960 ORTHO05D007537 1.9e-139 499.6 312 81.7
Ca_04868_v3 Cicer arietinum L. HOM05D005960 ORTHO05D007537 2.4e-139 499.2 309 81.2
Eucgr.I01985 Eucalyptus grandis HOM05D005960 ORTHO05D007537 5.4e-139 498.0 315 81.0
MD17G1056600 Malus domestica HOM05D005960 ORTHO05D007537 5.4e-139 498.0 312 81.4
Rhsim10G0046600 Rhododendron simsii HOM05D005960 ORTHO05D007537 2.1e-138 496.1 330 78.8
Thecc.04G090800 Theobroma cacao HOM05D005960 ORTHO05D007537 7.8e-138 494.2 318 79.6
FvH4_6g47510 Fragaria vesca HOM05D005960 ORTHO05D007537 1.0e-137 493.8 314 79.9
RcHm_v2.0_Chr2g0166541 Rosa chinensis HOM05D005960 ORTHO05D007537 1.0e-137 493.8 314 80.3
Phvul.004G033300 Phaseolus vulgaris HOM05D005960 ORTHO05D007537 1.7e-137 493.0 311 81.0
Glyma.19G027400 Glycine max HOM05D005960 ORTHO05D007537 3.0e-137 492.3 311 80.1
QL02p039477 Quercus lobata HOM05D005960 ORTHO05D007537 6.6e-137 491.1 320 80.3
QL02p039732 Quercus lobata HOM05D005960 ORTHO05D007537 1.1e-136 490.3 320 79.4
VMungo0464G0831 Vigna mungo HOM05D005960 ORTHO05D007537 1.1e-136 490.3 313 80.5
FAN05G2671 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.9e-136 489.6 314 79.3
Lj2g0023614 Lotus japonicus HOM05D005960 ORTHO05D007537 3.3e-136 488.8 313 80.5
TPR.G26197 Trifolium pratense HOM05D005960 ORTHO05D007537 3.3e-136 488.8 312 80.8
Potri.017G090100 Populus trichocarpa HOM05D005960 ORTHO05D007537 4.3e-136 488.4 317 81.4
Glyma.13G059000 Glycine max HOM05D005960 ORTHO05D007537 7.3e-136 487.6 311 79.4
CANSAT64G2728 Cannabis sativa HOM05D005960 ORTHO05D007537 1.2e-135 486.9 313 81.8
PGR004G2687 Punica granatum HOM05D005960 ORTHO05D007537 1.2e-135 486.9 316 79.4
AUR62018147 Chenopodium quinoa HOM05D005960 ORTHO05D007537 3.6e-135 485.3 308 80.2
MBI16_g15532_MAGBIO Magnolia biondii HOM05D005960 ORTHO05D007537 1.4e-134 483.4 311 79.7
Cc07_g03890 Coffea canephora HOM05D005960 ORTHO05D007537 1.8e-134 483.0 313 80.2
Medtr6g013750 Medicago truncatula HOM05D005960 ORTHO05D007537 1.8e-134 483.0 312 79.5
Psat1g068640 Pisum sativum HOM05D005960 ORTHO05D007537 3.1e-134 482.3 313 78.9
arahy.Tifrunner.gnm1.ann1.8N3EDT Arachis hypogaea HOM05D005960 ORTHO05D007537 5.2e-134 481.5 317 80.1
AUR62042562 Chenopodium quinoa HOM05D005960 ORTHO05D007537 8.9e-134 480.7 303 80.5
Duzib147G1008 Durio zibethinus HOM05D005960 ORTHO05D007537 1.2e-133 480.3 316 78.2
Aqoxy3G00406 Aquilegia oxysepala HOM05D005960 ORTHO05D007537 2.0e-133 479.6 309 77.7
arahy.Tifrunner.gnm1.ann1.7U9LX7 Arachis hypogaea HOM05D005960 ORTHO05D007537 2.0e-133 479.6 317 80.1
Ciclev10011697m.g Citrus clementina HOM05D005960 ORTHO05D007537 2.0e-133 479.6 315 78.7
COL.COLO4_21375 Corchorus olitorius HOM05D005960 ORTHO05D007537 1.3e-132 476.9 314 77.1
ClCG11G004630 Citrullus lanatus HOM05D005960 ORTHO05D007537 4.9e-132 474.9 313 79.6
CAN.G734.6 Capsicum annuum HOM05D005960 ORTHO05D007537 6.4e-132 474.6 316 77.5
Haze_14472 Corylus avellana HOM05D005960 ORTHO05D007537 8.3e-132 474.2 378 70.9
MELO3C022021.2 Cucumis melo HOM05D005960 ORTHO05D007537 1.4e-131 473.4 313 79.2
CsaV3_5G038400 Cucumis sativus L. HOM05D005960 ORTHO05D007537 1.9e-131 473.0 313 79.6
SalBow1G6551 Salvia bowleyana HOM05D005960 ORTHO05D007537 2.4e-131 472.6 301 82.1
EL10Ac2g03055 Beta vulgaris HOM05D005960 ORTHO05D007537 3.2e-131 472.2 313 77.6
Sabra17G0079200 Salix brachista HOM05D005960 ORTHO05D007537 3.2e-131 472.2 333 77.2
Migut.H00653 Erythranthe guttata HOM05D005960 ORTHO05D007537 5.4e-131 471.5 311 77.8
TWI60G0302 Tripterygium wilfordii HOM05D005960 ORTHO05D007537 5.4e-131 471.5 311 79.4
Lsat_1_v5_gn_2_87860 Lactuca sativa HOM05D005960 ORTHO05D007537 7.1e-131 471.1 316 78.2
Sed0006667 Sechium edule HOM05D005960 ORTHO05D007537 7.1e-131 471.1 310 79.7
HanXRQChr14g0448721 Helianthus annuus HOM05D005960 ORTHO05D007537 1.2e-130 470.3 314 78.0
Gohir.A11G071600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 1.3e-129 466.8 318 75.5
THA.LOC104802965 Tarenaya hassleriana HOM05D005960 ORTHO05D007537 1.7e-129 466.5 312 76.9
Gorai.007G081300 Gossypium raimondii HOM05D005960 ORTHO05D007537 3.0e-129 465.7 318 75.2
Lalb_Chr06g0175111 Lupinus albus HOM05D005960 ORTHO05D007537 1.1e-128 463.8 318 77.0
Hma1.2p1_1813F.1_g303790 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 2.8e-127 459.1 234 94.9
Hma1.2p1_3044F.1_g332082 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 2.8e-127 459.1 234 94.9
ECA238G1943 Erigeron canadensis HOM05D005960 ORTHO05D007537 4.7e-127 458.4 314 77.4
Sopen03g016610 Solanum pennellii HOM05D005960 ORTHO05D007537 4.7e-127 458.4 284 81.0
Solyc03g013240.4 Solanum lycopersicum HOM05D005960 ORTHO05D007537 1.1e-126 457.2 284 80.6
PSO421G0059 Papaver somniferum HOM05D005960 ORTHO05D007537 2.6e-125 452.6 310 73.9
Thhalv10020707m.g Eutrema salsugineum HOM05D005960 ORTHO05D007537 4.4e-125 451.8 317 73.8
Nitab4.5_0005196g0010 Nicotiana tabacum HOM05D005960 ORTHO05D007537 4.4e-125 451.8 299 76.6
PSO013G0364 Papaver somniferum HOM05D005960 ORTHO05D007537 4.4e-125 451.8 310 74.5
CDE07G2056 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 5.8e-125 451.4 316 74.4
DCAR_005553 Daucus carota HOM05D005960 ORTHO05D007537 9.9e-125 450.7 312 75.6
Sp3g01070 Schrenkiella parvula HOM05D005960 ORTHO05D007537 9.9e-125 450.7 307 75.2
AT3G01060 Arabidopsis thaliana HOM05D005960 ORTHO05D007537 1.3e-124 450.3 317 73.2
CARHR076010 Cardamine hirsuta HOM05D005960 ORTHO05D007537 1.3e-124 450.3 317 73.5
BNapus_Darmor_BZH_scaffold_97p00050 Brassica napus HOM05D005960 ORTHO05D007537 2.2e-124 449.5 308 74.7
Carub.0003s0111 Capsella rubella HOM05D005960 ORTHO05D007537 2.9e-124 449.1 318 74.2
BolC1t05923H Brassica oleracea HOM05D005960 ORTHO05D007537 3.8e-124 448.7 308 74.4
HPP92_018459 Vanilla planifolia HOM05D005960 ORTHO05D007537 8.4e-124 447.6 265 83.0
AL3G11200 Arabidopsis lyrata HOM05D005960 ORTHO05D007537 1.4e-123 446.8 317 72.9
Aa31LG5G12560 Aethionema arabicum HOM05D005960 ORTHO05D007537 7.1e-123 444.5 311 74.3
BNapus_Darmor_BZH_scaffold_113p00110 Brassica napus HOM05D005960 ORTHO05D007537 7.1e-123 444.5 309 75.1
Zm00001eb292620 Zea mays HOM05D005960 ORTHO05D007537 7.1e-123 444.5 305 74.8
BraA01t04634Z Brassica rapa HOM05D005960 ORTHO05D007537 9.2e-123 444.1 309 75.1
Peaxi162Scf00451g00429 Petunia axillaris HOM05D005960 ORTHO05D007537 2.3e-121 439.5 313 74.4
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 2.5e-120 436.0 313 78.0
Os05g0512200 Oryza sativa ssp. japonica HOM05D005960 ORTHO05D007537 3.3e-120 435.6 298 75.2
ATR0111G015 Amborella trichopoda HOM05D005960 ORTHO05D007537 1.3e-119 433.7 307 71.7
Nitab4.5_0001637g0110 Nicotiana tabacum HOM05D005960 ORTHO05D007537 1.8e-118 429.9 280 77.5
BcaC09g47681 Brassica carinata HOM05D005960 ORTHO05D007537 2.0e-117 426.4 308 72.1
unitig_736.g22244 Utricularia gibba HOM05D005960 ORTHO05D007537 3.4e-117 425.6 317 70.3
Nn4g23343 Nelumbo nucifera HOM05D005960 ORTHO05D007537 9.3e-115 417.5 220 92.3
FAN14G4646 Fragaria x ananassa HOM05D005960 ORTHO05D007537 2.8e-111 406.0 314 69.1
SEGI_05647 Sequoiadendron giganteum HOM05D005960 ORTHO05D007537 1.8e-110 403.3 251 76.5
Sc10g0003290 Simmondsia chinensis HOM05D005960 ORTHO05D007537 9.9e-109 397.5 228 85.5
FAN02G1813 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.7e-108 396.7 215 89.8
Mapoly0015s0039 Marchantia polymorpha HOM05D005960 ORTHO05D007537 8.4e-108 394.4 240 77.9
SMO335G0027 Selaginella moellendorffii HOM05D005960 ORTHO05D007537 2.3e-105 386.3 240 75.0
Pp3c2_13280 Physcomitrium patens HOM05D005960 ORTHO05D007537 3.0e-105 386.0 263 71.1
AagrBONN_evm.TU.Sc2ySwM_362.2259 Anthoceros agrestis HOM05D005960 ORTHO05D007537 9.3e-99 364.4 240 71.7
Prupe.3G258900 Prunus persica HOM05D005960 ORTHO05D007537 8.7e-97 357.8 190 92.1
CBR_g61504 Chara braunii HOM05D005960 ORTHO05D007537 2.2e-92 343.2 241 68.9
Gohir.D11G075600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 4.2e-91 339.0 190 85.8
Actinidia01967 Actinidia chinensis HOM05D005960 ORTHO05D007537 1.5e-88 330.5 247 75.3
CDE04G1831 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 1.2e-82 310.8 316 58.5
FAN09G3416 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.1e-80 304.3 247 65.2
Cre13.g562750 Chlamydomonas reinhardtii HOM05D005960 ORTHO05D007537 1.5e-77 293.9 248 57.7
MSTRG.3021 Avicennia marina HOM05D005960 ORTHO05D007537 1.1e-64 251.1 137 88.3
MCO03G230 Micromonas commoda HOM05D005960 ORTHO05D007537 1.5e-59 234.2 218 50.9
TAR627G0454 Trochodendron aralioides HOM05D005960 ORTHO05D007537 2.5e-59 233.4 184 66.3
TPR.G22619 Trifolium pratense HOM05D005960 ORTHO05D007537 8.3e-47 191.8 149 69.1
Potri.004G125301 Populus trichocarpa HOM05D005960 ORTHO05D007537 2.3e-44 183.7 152 69.1
MCO05G128 Micromonas commoda HOM05D005960 ORTHO05D007537 4.2e-43 179.5 211 46.4
PRCOL_00004151 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 1.6e-42 177.6 197 48.7
PRCOL_00002980 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 2.3e-41 173.7 202 46.0
MCO08G069 Micromonas commoda HOM05D005960 ORTHO05D007537 8.6e-36 155.2 218 40.4
PRCOL_00003347 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 2.2e-31 140.6 210 37.6
MCO08G121 Micromonas commoda HOM05D005960 ORTHO05D007537 6.0e-29 132.5 225 33.3
MD09G1061300 Malus domestica HOM05D005960 ORTHO05D007537 6.8e-25 119.0 106 65.1
Oeu061493.1 Olea europaea HOM05D005960 ORTHO05D007537 3.5e-21 106.7 51 88.2
MD09G1061200 Malus domestica HOM05D005960 ORTHO05D007537 1.5e-16 91.3 88 60.2
EL10Ac2g03064 Beta vulgaris HOM05D005960 ORTHO05D007537 7.3e-11 72.4 54 72.2
MCO08G023 Micromonas commoda HOM05D005960 ORTHO05D270145 2.4e-09 67.4 160 28.1


User provided reference genes

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