Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv11484 Davidia involucrata HOM05D006982 ORTHO05D008909 1.4e-101 372.9 180 100.0
Hma1.2p1_1813F.1_g303760 Hydrangea macrophylla HOM05D006982 ORTHO05D008909 3.0e-83 312.0 169 85.8
Hma1.2p1_3044F.1_g332060 Hydrangea macrophylla HOM05D006982 ORTHO05D008909 1.9e-82 309.3 169 84.6
Atru.chr8.390 Acer truncatum HOM05D006982 ORTHO05D008909 4.6e-76 288.1 154 87.7
Haze_14468 Corylus avellana HOM05D006982 ORTHO05D008909 6.0e-76 287.7 174 77.6
Rhsim10G0045300 Rhododendron simsii HOM05D006982 ORTHO05D008909 2.3e-75 285.8 174 77.0
Potri.017G090400 Populus trichocarpa HOM05D006982 ORTHO05D008909 1.9e-74 282.7 161 82.0
GSVIVG01011493001 Vitis vinifera HOM05D006982 ORTHO05D008909 2.5e-74 282.3 168 79.8
Manes.01G098700 Manihot esculenta HOM05D006982 ORTHO05D008909 3.7e-73 278.5 169 76.3
CiPaw.03G091200 Carya illinoinensis HOM05D006982 ORTHO05D008909 6.3e-73 277.7 165 80.0
Thecc.04G091200 Theobroma cacao HOM05D006982 ORTHO05D008909 8.2e-73 277.3 170 78.2
Duzib187G0332 Durio zibethinus HOM05D006982 ORTHO05D008909 1.4e-72 276.6 169 76.9
CANSAT64G0008 Cannabis sativa HOM05D006982 ORTHO05D008909 3.4e-71 271.9 175 76.0
CsaV3_3G026330 Cucumis sativus L. HOM05D006982 ORTHO05D008909 4.5e-71 271.6 151 82.1
TAR629G3328 Trochodendron aralioides HOM05D006982 ORTHO05D008909 4.5e-71 271.6 156 80.1
MELO3C014935.2 Cucumis melo HOM05D006982 ORTHO05D008909 5.9e-71 271.2 151 82.1
Thhalv10005014m.g Eutrema salsugineum HOM05D006982 ORTHO05D008909 7.6e-71 270.8 173 74.0
vmacro05662 Vaccinium macrocarpon HOM05D006982 ORTHO05D008909 7.6e-71 270.8 161 78.3
Sc11g0004740 Simmondsia chinensis HOM05D006982 ORTHO05D008909 1.0e-70 270.4 151 84.1
Nn4g23351 Nelumbo nucifera HOM05D006982 ORTHO05D008909 2.2e-70 269.2 154 78.6
Cc07_g04010 Coffea canephora HOM05D006982 ORTHO05D008909 2.9e-70 268.9 169 76.3
QL02p039506 Quercus lobata HOM05D006982 ORTHO05D008909 2.9e-70 268.9 171 77.2
SGA_v2.0_scaffold4G02409 Striga asiatica HOM05D006982 ORTHO05D008909 2.9e-70 268.9 166 72.9
Sp2g17880 Schrenkiella parvula HOM05D006982 ORTHO05D008909 3.8e-70 268.5 173 72.3
Sed0004734 Sechium edule HOM05D006982 ORTHO05D008909 3.8e-70 268.5 151 83.4
AT3G29280 Arabidopsis thaliana HOM05D006982 ORTHO05D008909 5.0e-70 268.1 169 72.8
A06p40000 Brassica napus HOM05D006982 ORTHO05D008909 6.5e-70 267.7 160 78.1
Carub.0005s0799 Capsella rubella HOM05D006982 ORTHO05D008909 6.5e-70 267.7 173 72.8
BcaB07g30087 Brassica carinata HOM05D006982 ORTHO05D008909 1.1e-69 266.9 174 71.8
MSTRG.3019 Avicennia marina HOM05D006982 ORTHO05D008909 1.9e-69 266.2 175 72.6
AL5G19280 Arabidopsis lyrata HOM05D006982 ORTHO05D008909 3.2e-69 265.4 176 71.6
Aa31LG2G3980 Aethionema arabicum HOM05D006982 ORTHO05D008909 4.2e-69 265.0 155 76.8
Eucgr.I01983 Eucalyptus grandis HOM05D006982 ORTHO05D008909 4.2e-69 265.0 167 74.9
Glyma.13G058700 Glycine max HOM05D006982 ORTHO05D008909 4.2e-69 265.0 156 77.6
Gohir.D09G010400 Gossypium hirsutum HOM05D006982 ORTHO05D008909 4.2e-69 265.0 152 80.9
VMungo0464G0061 Vigna mungo HOM05D006982 ORTHO05D008909 5.5e-69 264.6 156 77.6
BcaC03g17569 Brassica carinata HOM05D006982 ORTHO05D008909 9.3e-69 263.8 174 70.7
Ciclev10012958m.g Citrus clementina HOM05D006982 ORTHO05D008909 9.3e-69 263.8 159 78.6
Gorai.006G012000 Gossypium raimondii HOM05D006982 ORTHO05D008909 9.3e-69 263.8 152 80.3
Phvul.004G033900 Phaseolus vulgaris HOM05D006982 ORTHO05D008909 9.3e-69 263.8 156 76.9
Lj2g0023544 Lotus japonicus HOM05D006982 ORTHO05D008909 1.2e-68 263.5 174 71.8
CARHR292480 Cardamine hirsuta HOM05D006982 ORTHO05D008909 1.6e-68 263.1 171 71.9
PGR004G0184 Punica granatum HOM05D006982 ORTHO05D008909 1.6e-68 263.1 171 73.1
Migut.H00650 Erythranthe guttata HOM05D006982 ORTHO05D008909 2.1e-68 262.7 175 72.6
Nitab4.5_0005196g0040 Nicotiana tabacum HOM05D006982 ORTHO05D008909 3.6e-68 261.9 173 72.3
A02p36510 Brassica napus HOM05D006982 ORTHO05D008909 6.1e-68 261.2 167 71.9
BraA02t08647Z Brassica rapa HOM05D006982 ORTHO05D008909 6.1e-68 261.2 167 71.9
Actinidia07827 Actinidia chinensis HOM05D006982 ORTHO05D008909 1.0e-67 260.4 147 83.7
ClCG05G014130 Citrullus lanatus HOM05D006982 ORTHO05D008909 1.0e-67 260.4 151 78.8
Glyma.19G027800 Glycine max HOM05D006982 ORTHO05D008909 1.3e-67 260.0 165 72.7
TWI60G0050 Tripterygium wilfordii HOM05D006982 ORTHO05D008909 1.8e-67 259.6 170 75.3
C02p55480 Brassica napus HOM05D006982 ORTHO05D008909 2.3e-67 259.2 171 70.8
TPR.G26172 Trifolium pratense HOM05D006982 ORTHO05D008909 3.0e-67 258.8 167 71.3
BolC2t11604H Brassica oleracea HOM05D006982 ORTHO05D008909 3.9e-67 258.5 161 73.9
Nitab4.5_0001637g0060 Nicotiana tabacum HOM05D006982 ORTHO05D008909 3.9e-67 258.5 166 74.1
Psat1g070160 Pisum sativum HOM05D006982 ORTHO05D008909 3.9e-67 258.5 153 77.1
BolC7t44339H Brassica oleracea HOM05D006982 ORTHO05D008909 8.7e-67 257.3 155 77.4
SalBow1G5236 Salvia bowleyana HOM05D006982 ORTHO05D008909 1.1e-66 256.9 161 72.7
THA.LOC104805498 Tarenaya hassleriana HOM05D006982 ORTHO05D008909 1.9e-66 256.1 152 75.7
Sabra17G0079600 Salix brachista HOM05D006982 ORTHO05D008909 5.7e-66 254.6 202 63.9
FvH4_6g47420 Fragaria vesca HOM05D006982 ORTHO05D008909 7.4e-66 254.2 171 71.3
FAN14G3321 Fragaria x ananassa HOM05D006982 ORTHO05D008909 7.4e-66 254.2 171 71.3
EL10Ac2g03084 Beta vulgaris HOM05D006982 ORTHO05D008909 1.6e-65 253.1 177 68.9
FAN09G4389 Fragaria x ananassa HOM05D006982 ORTHO05D008909 2.2e-65 252.7 171 71.3
RcHm_v2.0_Chr2g0166491 Rosa chinensis HOM05D006982 ORTHO05D008909 2.8e-65 252.3 171 72.5
RcHm_v2.0_Chr2g0166501 Rosa chinensis HOM05D006982 ORTHO05D008909 3.7e-65 251.9 174 67.8
Sopen03g016600 Solanum pennellii HOM05D006982 ORTHO05D008909 4.8e-65 251.5 172 68.0
HanXRQChr07g0199461 Helianthus annuus HOM05D006982 ORTHO05D008909 8.2e-65 250.8 148 77.0
FAN02G3418 Fragaria x ananassa HOM05D006982 ORTHO05D008909 1.1e-64 250.4 171 70.8
Solyc03g013250.4 Solanum lycopersicum HOM05D006982 ORTHO05D008909 1.4e-64 250.0 166 69.3
AUR62042567 Chenopodium quinoa HOM05D006982 ORTHO05D008909 2.4e-64 249.2 173 68.2
CAN.G734.5 Capsicum annuum HOM05D006982 ORTHO05D008909 5.3e-64 248.1 166 71.1
ECA238G0675 Erigeron canadensis HOM05D006982 ORTHO05D008909 6.9e-64 247.7 154 74.0
MD09G1061600 Malus domestica HOM05D006982 ORTHO05D008909 2.0e-63 246.1 173 67.6
Lalb_Chr02g0159031 Lupinus albus HOM05D006982 ORTHO05D008909 2.6e-63 245.7 152 75.0
Aqoxy3G00454 Aquilegia oxysepala HOM05D006982 ORTHO05D008909 3.4e-63 245.4 155 74.2
BraA06t26915Z Brassica rapa HOM05D006982 ORTHO05D008909 4.5e-63 245.0 138 81.2
Lsat_1_v5_gn_2_87800 Lactuca sativa HOM05D006982 ORTHO05D008909 4.5e-63 245.0 151 75.5
Prupe.3G258600 Prunus persica HOM05D006982 ORTHO05D008909 2.2e-62 242.7 182 66.5
Zm00001eb011170 Zea mays HOM05D006982 ORTHO05D008909 5.0e-62 241.5 156 68.6
PSO017G1487 Papaver somniferum HOM05D006982 ORTHO05D008909 1.9e-61 239.6 153 73.2
Os03g0257000 Oryza sativa ssp. japonica HOM05D006982 ORTHO05D008909 7.2e-61 237.7 156 67.9
Cpa.g.sc14.148 Carica papaya HOM05D006982 ORTHO05D008909 9.4e-61 237.3 152 73.0
Os03g0209700 Oryza sativa ssp. japonica HOM05D006982 ORTHO05D008909 4.6e-60 235.0 171 63.7
PSO478G0313 Papaver somniferum HOM05D006982 ORTHO05D008909 1.0e-59 233.8 158 70.3
ATR0064G116 Amborella trichopoda HOM05D006982 ORTHO05D008909 1.8e-59 233.0 160 67.5
Gohir.A09G011401 Gossypium hirsutum HOM05D006982 ORTHO05D008909 1.4e-56 223.4 161 69.6
Hund13166 Selenicereus undatus HOM05D006982 ORTHO05D008909 1.5e-55 219.9 158 69.6
Lj4A116T80 Lonicera japonica HOM05D006982 ORTHO05D008909 2.2e-54 216.1 129 82.2
COL.COLO4_21380 Corchorus olitorius HOM05D006982 ORTHO05D008909 2.7e-52 209.1 120 80.0
SEGI_41437 Sequoiadendron giganteum HOM05D006982 ORTHO05D008909 8.8e-51 204.1 152 61.2
Peaxi162Scf00451g00425 Petunia axillaris HOM05D006982 ORTHO05D008909 4.4e-50 201.8 166 64.5
CDE04G2259 Ceratophyllum demersum HOM05D006982 ORTHO05D008909 2.8e-49 199.1 125 72.8
Ah.10g031970 Amaranthus hybridus HOM05D006982 ORTHO05D008909 4.8e-49 198.4 171 59.1
Medtr6g013815 Medicago truncatula HOM05D006982 ORTHO05D008909 1.4e-48 196.8 118 73.7
BolC2t11598H Brassica oleracea HOM05D006982 ORTHO05D008909 3.1e-48 195.7 132 68.2
SMO164G0193 Selaginella moellendorffii HOM05D006982 ORTHO05D008909 2.0e-47 193.0 149 58.4
unitig_899.g15159 Utricularia gibba HOM05D006982 ORTHO05D008909 3.3e-42 175.6 152 59.2
Pp3c21_18720 Physcomitrium patens HOM05D006982 ORTHO05D008909 1.3e-41 173.7 154 53.2
arahy.Tifrunner.gnm1.ann1.NGZQ86 Arachis hypogaea HOM05D006982 ORTHO05D008909 2.2e-38 162.9 153 54.2
arahy.Tifrunner.gnm1.ann1.84WVAW Arachis hypogaea HOM05D006982 ORTHO05D008909 1.5e-37 160.2 153 54.9
C07p38170 Brassica napus HOM05D006982 ORTHO05D008909 2.1e-36 156.4 110 67.3
SHI03750 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-32 142.1 92 68.5
C02p55410 Brassica napus HOM05D006982 ORTHO05D008909 3.5e-31 139.0 114 59.6
CSS0035536 Camellia sinensis var. sinensis HOM05D006982 ORTHO05D008909 3.5e-31 139.0 71 90.1
FAN05G3993 Fragaria x ananassa HOM05D006982 ORTHO05D008909 3.5e-31 139.0 92 71.7
TPR.G3955 Trifolium pratense HOM05D006982 ORTHO05D008909 7.0e-24 114.8 76 75.0
AUR62018155 Chenopodium quinoa HOM05D006982 ORTHO05D008909 2.3e-14 83.2 50 76.0
CSS0038093 Camellia sinensis var. sinensis HOM05D006982 ORTHO05D008909 3.3e-13 79.3 47 80.9
Lj4A116T81 Lonicera japonica HOM05D006982 ORTHO05D008909 6.8e-11 71.6 53 67.9
AUR62006323 Chenopodium quinoa HOM05D003441 ORTHO05D044017 1.7e-09 67.0 70 50.0
Medtr6g013805 Medicago truncatula HOM05D006982 ORTHO05D008909 3.7e-09 65.9 41 75.6
PGSC0003DMG400033554 Solanum tuberosum HOM05D006982 ORTHO05D008909 6.4e-09 65.1 43 69.8
SHI03749 Sapria himalayana HOM05D006982 ORTHO05D000001 1.1e-08 64.3 35 74.3
TPR.G26213 Trifolium pratense HOM05D006982 ORTHO05D008909 4.6e-07 58.9 47 59.6


User provided reference genes

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