Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv11366 Davidia involucrata HOM05D002136 ORTHO05D002145 8.5e-47 190.3 116 100.0
Dinv41387 Davidia involucrata HOM05D002136 ORTHO05D002145 3.6e-21 105.1 54 94.4
Dinv42867 Davidia involucrata HOM05D000882 ORTHO05D001142 3.5e-16 88.6 54 79.6
Dinv43233 Davidia involucrata HOM05D000882 ORTHO05D001142 3.5e-16 88.6 54 79.6
TAR625G1124 Trochodendron aralioides HOM05D002136 ORTHO05D002145 1.4e-09 66.6 47 74.5
Cc06_g15140 Coffea canephora HOM05D002136 ORTHO05D002145 3.1e-09 65.5 61 60.7
CSS0000642 Camellia sinensis var. sinensis HOM05D002136 ORTHO05D002145 7.0e-09 64.3 53 66.0
MBI14_g24800_MAGBIO Magnolia biondii HOM05D002136 ORTHO05D002145 1.7e-07 59.7 65 47.7
Rhsim01G0035300 Rhododendron simsii HOM05D000882 ORTHO05D001142 2.3e-07 59.3 66 50.0
Nn8g39864 Nelumbo nucifera HOM05D002136 ORTHO05D002145 5.0e-07 58.2 54 57.4
Prupe.7G261500 Prunus persica HOM05D002136 ORTHO05D002145 6.6e-07 57.8 51 56.9
Potri.018G108200 Populus trichocarpa HOM05D002136 ORTHO05D002145 8.6e-07 57.4 36 75.0
Thecc.09G032000 Theobroma cacao HOM05D002136 ORTHO05D002145 8.6e-07 57.4 33 84.8
COL.COLO4_18794 Corchorus olitorius HOM05D002136 ORTHO05D002145 1.1e-06 57.0 56 55.4
Potri.006G185700 Populus trichocarpa HOM05D002136 ORTHO05D002145 1.1e-06 57.0 35 80.0
Sabra18G0091800 Salix brachista HOM05D002136 ORTHO05D002145 1.1e-06 57.0 42 61.9
Aqoxy7G03429 Aquilegia oxysepala HOM05D002136 ORTHO05D002145 1.9e-06 56.2 56 57.1
Cpa.g.sc46.142 Carica papaya HOM05D002136 ORTHO05D002145 1.9e-06 56.2 59 55.9
FAN26G0651 Fragaria x ananassa HOM05D002136 ORTHO05D002145 1.9e-06 56.2 51 60.8
Oeu021272.1 Olea europaea HOM05D002136 ORTHO05D002145 1.9e-06 56.2 62 51.6
Phvul.009G206800 Phaseolus vulgaris HOM05D002136 ORTHO05D002145 1.9e-06 56.2 30 83.3
TAR636G1536 Trochodendron aralioides HOM05D002136 ORTHO05D002145 1.9e-06 56.2 30 83.3
MD15G1153100 Malus domestica HOM05D002136 ORTHO05D002145 2.5e-06 55.8 54 50.0
QL02p093024 Quercus lobata HOM05D002136 ORTHO05D002145 2.5e-06 55.8 53 58.5
Sabra06G0141000 Salix brachista HOM05D002136 ORTHO05D002145 3.3e-06 55.5 63 50.8
Duzib168G2318 Durio zibethinus HOM05D002136 ORTHO05D002145 4.2e-06 55.1 33 81.8
FAN23G0309 Fragaria x ananassa HOM05D002136 ORTHO05D002145 4.2e-06 55.1 51 58.8
Actinidia38334 Actinidia chinensis HOM05D000882 ORTHO05D001142 5.5e-06 54.7 40 67.5
Duzib187G1505 Durio zibethinus HOM05D002136 ORTHO05D002145 5.5e-06 54.7 31 77.4
Gohir.A13G184451 Gossypium hirsutum HOM05D002136 ORTHO05D002145 5.5e-06 54.7 62 50.0
FvH4_1g01050 Fragaria vesca HOM05D002136 ORTHO05D002145 7.2e-06 54.3 51 56.9
FAN19G2520 Fragaria x ananassa HOM05D002136 ORTHO05D002145 7.2e-06 54.3 51 56.9
FAN28G0826 Fragaria x ananassa HOM05D002136 ORTHO05D002145 7.2e-06 54.3 51 56.9
Gohir.D13G190800 Gossypium hirsutum HOM05D002136 ORTHO05D002145 7.2e-06 54.3 51 54.9
Manes.14G112628 Manihot esculenta HOM05D002136 ORTHO05D002145 7.2e-06 54.3 31 77.4
CsaV3_1G028840 Cucumis sativus L. HOM05D002136 ORTHO05D002145 9.5e-06 53.9 35 68.6
Duzib150G0547 Durio zibethinus HOM05D002136 ORTHO05D002145 9.5e-06 53.9 33 81.8
Glyma.06G221600 Glycine max HOM05D002136 ORTHO05D002145 9.5e-06 53.9 29 82.8
Glyma.17G074600 Glycine max HOM05D002136 ORTHO05D002145 9.5e-06 53.9 45 57.8
Gorai.013G216600 Gossypium raimondii HOM05D002136 ORTHO05D002145 9.5e-06 53.9 51 54.9
Nitab4.5_0002315g0120 Nicotiana tabacum HOM05D002136 ORTHO05D002145 9.5e-06 53.9 64 51.6


User provided reference genes

Program Settings