Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv11280 Davidia involucrata HOM05D007464 ORTHO05D009388 1.0e-101 374.0 283 100.0
Hma1.2p1_1651F.1_g295790 Hydrangea macrophylla HOM05D007464 ORTHO05D009388 6.4e-48 195.3 386 53.1
Dinv32981 Davidia involucrata HOM05D007464 ORTHO05D009388 1.5e-41 174.1 290 40.0
CiPaw.07G097200 Carya illinoinensis HOM05D007464 ORTHO05D009388 2.9e-40 169.9 352 53.4
TAR362G0634 Trochodendron aralioides HOM05D007464 ORTHO05D009388 8.4e-40 168.3 385 50.6
Lsat_1_v5_gn_5_189900 Lactuca sativa HOM05D007464 ORTHO05D009388 3.5e-38 162.9 291 42.3
COL.COLO4_08053 Corchorus olitorius HOM05D007464 ORTHO05D009388 5.1e-37 159.1 384 47.7
Lj1C41G0 Lonicera japonica HOM05D007464 ORTHO05D009388 6.7e-37 158.7 373 51.2
Hma1.2p1_0209F.1_g089270 Hydrangea macrophylla HOM05D007464 ORTHO05D009388 8.7e-37 158.3 290 41.0
Duzib211G0172 Durio zibethinus HOM05D007464 ORTHO05D009388 2.5e-36 156.8 383 45.2
Migut.D00243 Erythranthe guttata HOM05D007464 ORTHO05D009388 8.1e-35 151.8 375 50.4
Potri.002G213200 Populus trichocarpa HOM05D007464 ORTHO05D009388 1.8e-34 150.6 382 45.8
TWI59G0843 Tripterygium wilfordii HOM05D007464 ORTHO05D009388 1.8e-34 150.6 377 48.0
Ciclev10019999m.g Citrus clementina HOM05D007464 ORTHO05D009388 9.0e-34 148.3 383 47.8
Aqoxy5G00591 Aquilegia oxysepala HOM05D007464 ORTHO05D009388 5.8e-33 145.6 384 46.1
Duzib133G1000 Durio zibethinus HOM05D007464 ORTHO05D009388 2.9e-32 143.3 382 44.5
Manes.05G070400 Manihot esculenta HOM05D007464 ORTHO05D009388 4.9e-32 142.5 289 39.4
DCAR_012440 Daucus carota HOM05D007464 ORTHO05D009388 2.4e-31 140.2 285 40.7
Peaxi162Scf00006g00365 Petunia axillaris HOM05D007464 ORTHO05D009388 2.4e-31 140.2 293 40.3
vmacro02528 Vaccinium macrocarpon HOM05D007464 ORTHO05D009388 2.4e-31 140.2 236 69.1
Actinidia00714 Actinidia chinensis HOM05D007464 ORTHO05D009388 3.2e-31 139.8 290 41.0
HanXRQChr01g0002881 Helianthus annuus HOM05D007464 ORTHO05D009388 3.2e-31 139.8 288 42.7
Prupe.8G249900 Prunus persica HOM05D007464 ORTHO05D009388 3.2e-31 139.8 383 48.6
Sabra14G0102300 Salix brachista HOM05D007464 ORTHO05D009388 4.2e-31 139.4 290 37.9
DCAR_018375 Daucus carota HOM05D007464 ORTHO05D009388 2.7e-30 136.7 288 41.3
DCAR_018376 Daucus carota HOM05D007464 ORTHO05D009388 2.7e-30 136.7 288 41.3
Cc01_g20010 Coffea canephora HOM05D007464 ORTHO05D009388 6.0e-30 135.6 291 39.9
ECA248G1268 Erigeron canadensis HOM05D007464 ORTHO05D009388 6.0e-30 135.6 290 37.9
MBI19_g27178_MAGBIO Magnolia biondii HOM05D007464 ORTHO05D009388 6.0e-30 135.6 376 47.1
MD11G1296100 Malus domestica HOM05D007464 ORTHO05D009388 7.9e-30 135.2 381 43.3
Duzib138G0973 Durio zibethinus HOM05D007464 ORTHO05D009388 2.3e-29 133.7 289 35.3
PSO210G5947 Papaver somniferum HOM05D007464 ORTHO05D009388 2.3e-29 133.7 266 39.1
Rhsim13G0020100 Rhododendron simsii HOM05D007464 ORTHO05D009388 3.0e-29 133.3 383 51.4
PGSC0003DMG401003815 Solanum tuberosum HOM05D007464 ORTHO05D009388 3.0e-29 133.3 288 39.6
Thecc.01G287900 Theobroma cacao HOM05D007464 ORTHO05D009388 5.1e-29 132.5 289 32.2
Gohir.D08G202800 Gossypium hirsutum HOM05D007464 ORTHO05D009388 8.7e-29 131.7 290 37.6
Gohir.A08G184300 Gossypium hirsutum HOM05D007464 ORTHO05D009388 1.5e-28 131.0 294 37.1
Gorai.004G214200 Gossypium raimondii HOM05D007464 ORTHO05D009388 2.5e-28 130.2 294 36.7
DCAR_002779 Daucus carota HOM05D007464 ORTHO05D009388 4.3e-28 129.4 289 38.4
Solyc09g074280.1 Solanum lycopersicum HOM05D007464 ORTHO05D009388 4.3e-28 129.4 288 38.9
Eucgr.H01612 Eucalyptus grandis HOM05D007464 ORTHO05D009388 5.6e-28 129.0 272 41.5
Nitab4.5_0008256g0020 Nicotiana tabacum HOM05D007464 ORTHO05D009388 7.4e-28 128.6 294 38.8
MD03G1273500 Malus domestica HOM05D007464 ORTHO05D009388 1.6e-27 127.5 373 46.4
Sopen09g029110 Solanum pennellii HOM05D007464 ORTHO05D009388 2.1e-27 127.1 288 38.9
CAN.G1466.5 Capsicum annuum HOM05D007464 ORTHO05D009388 2.8e-27 126.7 294 38.1
SalBow2G2643 Salvia bowleyana HOM05D007464 ORTHO05D009388 2.8e-27 126.7 242 63.2
PGSC0003DMG400034780 Solanum tuberosum HOM05D007464 ORTHO05D009388 6.2e-27 125.6 288 38.5
PGSC0003DMG402003815 Solanum tuberosum HOM05D007464 ORTHO05D009388 6.2e-27 125.6 288 38.5
Nn4g26088 Nelumbo nucifera HOM05D007464 ORTHO05D009388 1.8e-26 124.0 293 37.2
PGR119G1331 Punica granatum HOM05D007464 ORTHO05D009388 1.8e-26 124.0 291 40.2
Sopen09g029120 Solanum pennellii HOM05D007464 ORTHO05D009388 3.1e-26 123.2 288 37.8
Peaxi162Scf00006g00369 Petunia axillaris HOM05D007464 ORTHO05D009388 5.3e-26 122.5 373 47.7
Solyc09g074290.1 Solanum lycopersicum HOM05D007464 ORTHO05D009388 5.3e-26 122.5 294 37.8
Nitab4.5_0008984g0010 Nicotiana tabacum HOM05D007464 ORTHO05D009388 1.2e-25 121.3 294 37.8
Nitab4.5_0001985g0030 Nicotiana tabacum HOM05D007464 ORTHO05D009388 1.5e-25 120.9 294 38.1
PSO832G1506 Papaver somniferum HOM05D007464 ORTHO05D009388 4.5e-25 119.4 291 36.8
Lalb_Chr06g0163271 Lupinus albus HOM05D007464 ORTHO05D009388 1.1e-23 114.8 294 36.4
Cpa.g.sc9.143 Carica papaya HOM05D007464 ORTHO05D009388 2.5e-23 113.6 165 40.6
Atru.chr5.1306 Acer truncatum HOM05D007464 ORTHO05D009388 4.2e-23 112.8 385 40.0
CDE05G3330 Ceratophyllum demersum HOM05D007464 ORTHO05D009388 7.1e-23 112.1 256 36.3
Lsat_1_v5_gn_9_5000 Lactuca sativa HOM05D007464 ORTHO05D009388 9.3e-23 111.7 133 59.4
Cfa006067 Carpinus fangiana HOM05D007464 ORTHO05D009388 1.6e-22 110.9 382 48.2
ECA247G3730 Erigeron canadensis HOM05D007464 ORTHO05D009388 1.6e-22 110.9 133 60.9
HanXRQChr10g0283061 Helianthus annuus HOM05D007464 ORTHO05D009388 2.7e-22 110.2 133 58.6
FvH4_2g24420 Fragaria vesca HOM05D007464 ORTHO05D009388 6.0e-22 109.0 385 42.1
FAN24G2954 Fragaria x ananassa HOM05D007464 ORTHO05D009388 6.0e-22 109.0 385 42.1
Haze_04781 Corylus avellana HOM05D007464 ORTHO05D009388 2.3e-21 107.1 372 46.5
FAN20G1108 Fragaria x ananassa HOM05D007464 ORTHO05D009388 3.0e-21 106.7 385 41.6
arahy.Tifrunner.gnm1.ann1.9V8R16 Arachis hypogaea HOM05D007464 ORTHO05D009388 3.9e-21 106.3 299 35.5
arahy.Tifrunner.gnm1.ann1.6Q5HDN Arachis hypogaea HOM05D007464 ORTHO05D009388 5.1e-21 105.9 299 35.5
Phvul.007G167500 Phaseolus vulgaris HOM05D007464 ORTHO05D009388 2.5e-20 103.6 285 36.5
FAN27G3498 Fragaria x ananassa HOM05D007464 ORTHO05D009388 5.7e-20 102.4 385 40.3
arahy.Tifrunner.gnm1.ann1.TWB4J4 Arachis hypogaea HOM05D007464 ORTHO05D009388 1.6e-19 100.9 292 36.3
Medtr1g089180 Medicago truncatula HOM05D007464 ORTHO05D009388 2.2e-19 100.5 285 27.4
QL12p023217 Quercus lobata HOM05D007464 ORTHO05D009388 6.3e-19 99.0 289 34.9
RcHm_v2.0_Chr6g0292251 Rosa chinensis HOM05D007464 ORTHO05D009388 6.3e-19 99.0 384 34.4
arahy.Tifrunner.gnm1.ann1.KRYP2Z Arachis hypogaea HOM05D007464 ORTHO05D009388 8.2e-19 98.6 292 28.4
Glyma.02G151200 Glycine max HOM05D007464 ORTHO05D009388 8.2e-19 98.6 287 34.8
FAN15G0926 Fragaria x ananassa HOM05D007464 ORTHO05D009388 2.4e-18 97.1 375 41.1
CANSAT25G0135 Cannabis sativa HOM05D007464 ORTHO05D009388 3.1e-18 96.7 384 40.1
TPR.G16955 Trifolium pratense HOM05D007464 ORTHO05D009388 1.5e-17 94.4 216 45.4
Psat6g168480 Pisum sativum HOM05D007464 ORTHO05D009388 1.0e-16 91.7 290 31.4
VMungo0720G1822 Vigna mungo HOM05D007464 ORTHO05D009388 1.2e-14 84.7 285 33.7
ATR0487G010 Amborella trichopoda HOM05D007464 ORTHO05D009388 7.9e-14 82.0 132 50.0
SEGI_03126 Sequoiadendron giganteum HOM05D006239 ORTHO05D009388 5.1e-13 79.3 65 55.4
Ca_10384_v3 Cicer arietinum L. HOM05D007464 ORTHO05D009388 7.4e-12 75.5 290 25.5
CAN.G1466.4 Capsicum annuum HOM05D007464 ORTHO05D009388 8.2e-11 72.0 135 48.1
CsaV3_7G028410 Cucumis sativus L. HOM05D007464 ORTHO05D009388 8.2e-11 72.0 188 41.0
Oeu022809.1 Olea europaea HOM05D007464 ORTHO05D009388 8.2e-11 72.0 130 77.7
Lj5g0006511 Lotus japonicus HOM05D007464 ORTHO05D009388 1.2e-09 68.2 284 31.0
MELO3C015881.2 Cucumis melo HOM05D007464 ORTHO05D009388 1.5e-09 67.8 132 48.5
Rhsim13G0020000 Rhododendron simsii HOM05D011829 ORTHO05D011279 2.6e-09 67.0 59 57.6
VMungo0464G1396 Vigna mungo HOM05D006239 ORTHO05D008159 3.4e-09 66.6 59 52.5
Aqoxy2G00594 Aquilegia oxysepala HOM05D006239 ORTHO05D008159 1.0e-08 65.1 58 55.2
ClCG09G006650 Citrullus lanatus HOM05D007464 ORTHO05D009388 1.0e-08 65.1 43 67.4
Nitab4.5_0001985g0020 Nicotiana tabacum HOM05D007464 ORTHO05D009388 1.7e-08 64.3 49 57.1
Oeu043892.1 Olea europaea HOM05D006239 ORTHO05D008159 1.7e-08 64.3 61 50.8
Psat1g090680 Pisum sativum HOM05D006239 ORTHO05D008159 2.9e-08 63.5 58 51.7
Medtr6g027840 Medicago truncatula HOM05D006239 ORTHO05D008159 3.8e-08 63.2 58 51.7
TPR.G29873 Trifolium pratense HOM05D006239 ORTHO05D008159 3.8e-08 63.2 58 51.7
TWI60G1231 Tripterygium wilfordii HOM05D006239 ORTHO05D008159 3.8e-08 63.2 58 53.4
CAN.G128.146 Capsicum annuum HOM05D006239 ORTHO05D008159 6.5e-08 62.4 58 51.7
DCAR_013480 Daucus carota HOM05D006239 ORTHO05D008159 6.5e-08 62.4 57 52.6
PGR042G2680 Punica granatum HOM05D006239 ORTHO05D008159 6.5e-08 62.4 65 46.2
Ca_25688_v3 Cicer arietinum L. HOM05D006239 ORTHO05D008159 8.5e-08 62.0 58 50.0
ECA248G1952 Erigeron canadensis HOM05D006239 ORTHO05D008159 8.5e-08 62.0 58 50.0
Nitab4.5_0001985g0010 Nicotiana tabacum HOM05D007464 ORTHO05D009388 8.5e-08 62.0 241 34.0
Duzib128G1513 Durio zibethinus HOM05D006239 ORTHO05D008159 1.1e-07 61.6 60 51.7
Lj2g0011715 Lotus japonicus HOM05D006239 ORTHO05D008159 1.1e-07 61.6 59 49.2
arahy.Tifrunner.gnm1.ann1.RRY6M7 Arachis hypogaea HOM05D006239 ORTHO05D008159 1.4e-07 61.2 59 49.2
MELO3C009784.2 Cucumis melo HOM05D006239 ORTHO05D008159 1.4e-07 61.2 58 48.3
CsaV3_3G040530 Cucumis sativus L. HOM05D006239 ORTHO05D008159 1.4e-07 61.2 58 48.3
Gohir.A13G164500 Gossypium hirsutum HOM05D006239 ORTHO05D008159 1.4e-07 61.2 58 51.7
Gorai.013G195100 Gossypium raimondii HOM05D006239 ORTHO05D008159 1.4e-07 61.2 58 51.7
CANSAT78G0576 Cannabis sativa HOM05D006239 ORTHO05D008159 1.9e-07 60.8 58 50.0
ClCG10G015950 Citrullus lanatus HOM05D006239 ORTHO05D008159 1.9e-07 60.8 58 48.3
Hma1.2p1_0106F.1_g051090 Hydrangea macrophylla HOM05D006239 ORTHO05D008159 1.9e-07 60.8 60 50.0
Manes.08G154600 Manihot esculenta HOM05D006239 ORTHO05D008159 1.9e-07 60.8 60 50.0
Nitab4.5_0000387g0060 Nicotiana tabacum HOM05D006239 ORTHO05D008159 1.9e-07 60.8 58 50.0
PGSC0003DMG400028126 Solanum tuberosum HOM05D006239 ORTHO05D008159 1.9e-07 60.8 58 50.0
TWI32G0705 Tripterygium wilfordii HOM05D006239 ORTHO05D008159 1.9e-07 60.8 74 44.6
Atru.chr2.1466 Acer truncatum HOM05D006239 ORTHO05D008159 2.5e-07 60.5 60 46.7
Glyma.19G114600 Glycine max HOM05D006239 ORTHO05D008159 2.5e-07 60.5 58 51.7
Gohir.D12G033400 Gossypium hirsutum HOM05D006239 ORTHO05D008159 2.5e-07 60.5 58 51.7
Nitab4.5_0002087g0020 Nicotiana tabacum HOM05D006239 ORTHO05D008159 2.5e-07 60.5 58 50.0
Sopen10g032010 Solanum pennellii HOM05D006239 ORTHO05D008159 2.5e-07 60.5 58 50.0
arahy.Tifrunner.gnm1.ann1.P89NTP Arachis hypogaea HOM05D006239 ORTHO05D008159 3.2e-07 60.1 59 49.2
Dinv05570 Davidia involucrata HOM05D001400 ORTHO05D001795 3.2e-07 60.1 58 51.7
Nitab4.5_0001606g0060 Nicotiana tabacum HOM05D006239 ORTHO05D008159 3.2e-07 60.1 58 50.0
TWI32G0101 Tripterygium wilfordii HOM05D006239 ORTHO05D008159 3.2e-07 60.1 58 50.0
TWI32G0882 Tripterygium wilfordii HOM05D006239 ORTHO05D008159 3.2e-07 60.1 58 50.0
Glyma.05G088400 Glycine max HOM05D006239 ORTHO05D008159 4.2e-07 59.7 54 51.9
Gorai.008G034200 Gossypium raimondii HOM05D006239 ORTHO05D008159 4.2e-07 59.7 58 50.0
MBI05_g30081_MAGBIO Magnolia biondii HOM05D006239 ORTHO05D008159 4.2e-07 59.7 58 48.3
PGR142G3691 Punica granatum HOM05D006239 ORTHO05D008159 4.2e-07 59.7 58 51.7
Ciclev10019618m.g Citrus clementina HOM05D006239 ORTHO05D008159 5.5e-07 59.3 60 50.0
Cc06_g17210 Coffea canephora HOM05D006239 ORTHO05D008159 5.5e-07 59.3 58 50.0
Dinv25066 Davidia involucrata HOM05D006239 ORTHO05D008159 5.5e-07 59.3 58 48.3
Dinv25111 Davidia involucrata HOM05D006239 ORTHO05D008159 5.5e-07 59.3 58 48.3
Glyma.16G038200 Glycine max HOM05D006239 ORTHO05D008159 5.5e-07 59.3 59 50.8
HanXRQChr07g0197151 Helianthus annuus HOM05D006239 ORTHO05D008159 5.5e-07 59.3 58 50.0
Potri.013G062000 Populus trichocarpa HOM05D006239 ORTHO05D008159 5.5e-07 59.3 60 48.3
Aqoxy1G00540 Aquilegia oxysepala HOM05D006239 ORTHO05D008159 7.2e-07 58.9 65 43.1
Gohir.D13G167300 Gossypium hirsutum HOM05D006239 ORTHO05D008159 7.2e-07 58.9 58 48.3
Lalb_Chr02g0157291 Lupinus albus HOM05D006239 ORTHO05D008159 7.2e-07 58.9 59 50.8
Thecc.05G244600 Theobroma cacao HOM05D006239 ORTHO05D008159 7.2e-07 58.9 58 50.0
Migut.L01867 Erythranthe guttata HOM05D006239 ORTHO05D008159 9.4e-07 58.5 57 50.9
FvH4_1g28430 Fragaria vesca HOM05D006239 ORTHO05D008159 9.4e-07 58.5 74 44.6
FAN19G2333 Fragaria x ananassa HOM05D006239 ORTHO05D008159 9.4e-07 58.5 74 44.6
FAN28G0797 Fragaria x ananassa HOM05D006239 ORTHO05D008159 9.4e-07 58.5 74 44.6
HanXRQChr11g0348641 Helianthus annuus HOM05D006239 ORTHO05D008159 9.4e-07 58.5 58 51.7
Phvul.001G113900 Phaseolus vulgaris HOM05D006239 ORTHO05D008159 9.4e-07 58.5 58 50.0
Prupe.7G009400 Prunus persica HOM05D006239 ORTHO05D008159 9.4e-07 58.5 58 48.3
Sed0016948 Sechium edule HOM05D006239 ORTHO05D008159 9.4e-07 58.5 58 46.6
Duzib177G0431 Durio zibethinus HOM05D006239 ORTHO05D008159 1.2e-06 58.2 58 50.0
Gohir.A08G219511 Gossypium hirsutum HOM05D006239 ORTHO05D008159 1.2e-06 58.2 58 50.0
RcHm_v2.0_Chr3g0496481 Rosa chinensis HOM05D006239 ORTHO05D008159 1.2e-06 58.2 58 48.3
VMungo1383G2301 Vigna mungo HOM05D006239 ORTHO05D008159 1.6e-06 57.8 57 50.9
COL.COLO4_28611 Corchorus olitorius HOM05D006239 ORTHO05D008159 2.1e-06 57.4 58 48.3
Eucgr.A02127 Eucalyptus grandis HOM05D006239 ORTHO05D008159 2.1e-06 57.4 58 48.3
FAN23G2085 Fragaria x ananassa HOM05D006239 ORTHO05D008159 2.1e-06 57.4 58 48.3
FAN26G0828 Fragaria x ananassa HOM05D006239 ORTHO05D008159 2.1e-06 57.4 74 44.6
TAR623G1602 Trochodendron aralioides HOM05D006239 ORTHO05D008159 2.1e-06 57.4 57 47.4
HPP92_013951 Vanilla planifolia HOM05D006239 ORTHO05D008159 2.1e-06 57.4 158 30.4
Glyma.06G198600 Glycine max HOM05D007464 ORTHO05D009388 2.7e-06 57.0 79 41.8
Hma1.2p1_0768F.1_g215640 Hydrangea macrophylla HOM05D006239 ORTHO05D008159 2.7e-06 57.0 60 46.7
MD14G1005600 Malus domestica HOM05D006239 ORTHO05D008159 2.7e-06 57.0 58 48.3
PSO384G0331 Papaver somniferum HOM05D006239 ORTHO05D008159 2.7e-06 57.0 65 41.5
TAR371G1251 Trochodendron aralioides HOM05D006239 ORTHO05D008159 2.7e-06 57.0 58 46.6
Lj1g0013485 Lotus japonicus HOM05D006239 ORTHO05D008159 3.6e-06 56.6 59 49.2
Solyc10g081500.1 Solanum lycopersicum HOM05D006239 ORTHO05D008159 3.6e-06 56.6 58 48.3
Actinidia03938 Actinidia chinensis HOM05D006239 ORTHO05D008159 4.7e-06 56.2 58 46.6
QL07p017897 Quercus lobata HOM05D006239 ORTHO05D008159 4.7e-06 56.2 58 46.6
Haze_20449 Corylus avellana HOM05D006239 ORTHO05D008159 6.1e-06 55.8 58 46.6
Actinidia37802 Actinidia chinensis HOM05D006239 ORTHO05D008159 7.9e-06 55.5 58 44.8
PSO339G0050 Papaver somniferum HOM05D006239 ORTHO05D008159 7.9e-06 55.5 65 40.0


User provided reference genes

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