Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv11175 Davidia involucrata HOM05D005804 ORTHO05D006849 1.7e-88 329.3 164 100.0
Dinv23150 Davidia involucrata HOM05D005804 ORTHO05D006849 1.7e-53 213.0 121 87.6
CSS0012660 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 1.6e-43 179.9 146 65.8
QL10p002869 Quercus lobata HOM05D005804 ORTHO05D006849 8.6e-37 157.5 147 57.1
Haze_07141 Corylus avellana HOM05D005804 ORTHO05D006849 1.9e-36 156.4 121 66.1
Hma1.2p1_0014F.1_g009390 Hydrangea macrophylla HOM05D005804 ORTHO05D006849 1.9e-36 156.4 151 60.3
Dinv11177 Davidia involucrata HOM05D005804 ORTHO05D006849 2.5e-36 156.0 86 91.9
Oeu058729.2 Olea europaea HOM05D005804 ORTHO05D006849 3.3e-36 155.6 150 56.7
Rhsim12G0175100 Rhododendron simsii HOM05D005804 ORTHO05D006849 4.3e-36 155.2 131 62.6
Lj9A479T55 Lonicera japonica HOM05D005804 ORTHO05D006849 8.0e-35 151.0 136 58.1
CiPaw.11G006800 Carya illinoinensis HOM05D005804 ORTHO05D006849 2.3e-34 149.4 120 65.0
Prupe.5G150700 Prunus persica HOM05D005804 ORTHO05D006849 4.4e-33 145.2 121 63.6
Medtr3g099220 Medicago truncatula HOM05D005804 ORTHO05D006849 4.9e-32 141.7 125 59.2
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 4.9e-32 141.7 119 62.2
ECA247G1629 Erigeron canadensis HOM05D005804 ORTHO05D006849 8.3e-32 141.0 117 61.5
Lalb_Chr11g0069551 Lupinus albus HOM05D005804 ORTHO05D006849 1.1e-31 140.6 111 66.7
Cfa018793 Carpinus fangiana HOM05D005804 ORTHO05D006849 1.4e-31 140.2 103 68.0
Gorai.001G058800 Gossypium raimondii HOM05D005804 ORTHO05D006849 1.4e-31 140.2 154 52.6
COL.COLO4_28132 Corchorus olitorius HOM05D005804 ORTHO05D006849 3.2e-31 139.0 149 52.3
Medtr2g045240 Medicago truncatula HOM05D005804 ORTHO05D006849 4.1e-31 138.7 125 58.4
Medtr2g045245 Medicago truncatula HOM05D005804 ORTHO05D006849 4.1e-31 138.7 125 58.4
GSVIVG01008547001 Vitis vinifera HOM05D005804 ORTHO05D006849 5.4e-31 138.3 126 57.9
Psat5g051400 Pisum sativum HOM05D005804 ORTHO05D006849 7.0e-31 137.9 145 54.5
RcHm_v2.0_Chr7g0190081 Rosa chinensis HOM05D005804 ORTHO05D006849 1.2e-30 137.1 120 60.0
Medtr2g045235 Medicago truncatula HOM05D005804 ORTHO05D006849 1.6e-30 136.7 125 57.6
Gohir.D07G055466 Gossypium hirsutum HOM05D005804 ORTHO05D006849 3.5e-30 135.6 146 53.4
arahy.Tifrunner.gnm1.ann1.Y2QIS7 Arachis hypogaea HOM05D005804 ORTHO05D006849 6.0e-30 134.8 149 53.0
TPR.G14211 Trifolium pratense HOM05D005804 ORTHO05D006849 6.0e-30 134.8 145 54.5
Ca_16047_v3 Cicer arietinum L. HOM05D005804 ORTHO05D006849 7.8e-30 134.4 125 56.0
Gohir.A07G051066 Gossypium hirsutum HOM05D005804 ORTHO05D006849 7.8e-30 134.4 146 53.4
FAN08G1998 Fragaria x ananassa HOM05D005804 ORTHO05D006849 1.0e-29 134.0 147 50.3
Cc04_g08810 Coffea canephora HOM05D005804 ORTHO05D006849 3.0e-29 132.5 134 56.0
Lalb_Chr08g0237201 Lupinus albus HOM05D005804 ORTHO05D006849 3.0e-29 132.5 113 63.7
TWI23G1188 Tripterygium wilfordii HOM05D005804 ORTHO05D006849 3.0e-29 132.5 158 48.7
Thecc.03G129500 Theobroma cacao HOM05D005804 ORTHO05D006849 5.0e-29 131.7 146 52.7
Lj1g0008882 Lotus japonicus HOM05D005804 ORTHO05D006849 6.6e-29 131.3 129 55.0
Sed0001636 Sechium edule HOM05D005804 ORTHO05D006849 1.1e-28 130.6 121 55.4
SGA_v2.0_scaffold164G38120 Striga asiatica HOM05D005804 ORTHO05D006849 1.1e-28 130.6 100 68.0
FAN13G2030 Fragaria x ananassa HOM05D005804 ORTHO05D006849 2.5e-28 129.4 147 49.0
arahy.Tifrunner.gnm1.ann1.489AYV Arachis hypogaea HOM05D005804 ORTHO05D006849 3.3e-28 129.0 146 52.7
MD06G1141400 Malus domestica HOM05D005804 ORTHO05D006849 3.3e-28 129.0 115 60.9
arahy.Tifrunner.gnm1.ann1.PR501J Arachis hypogaea HOM05D005804 ORTHO05D006849 4.3e-28 128.6 148 50.7
Duzib205G0351 Durio zibethinus HOM05D005804 ORTHO05D006849 4.3e-28 128.6 154 48.1
FAN04G2797 Fragaria x ananassa HOM05D005804 ORTHO05D006849 1.6e-27 126.7 148 48.6
FAN18G4115 Fragaria x ananassa HOM05D005804 ORTHO05D006849 1.6e-27 126.7 148 48.6
Nitab4.5_0001180g0250 Nicotiana tabacum HOM05D005804 ORTHO05D006849 1.6e-27 126.7 151 47.7
TAR629G0711 Trochodendron aralioides HOM05D005804 ORTHO05D006849 1.6e-27 126.7 117 59.0
Aqoxy5G03360 Aquilegia oxysepala HOM05D005804 ORTHO05D006849 2.1e-27 126.3 140 51.4
HanXRQChr13g0408711 Helianthus annuus HOM05D005804 ORTHO05D006849 2.1e-27 126.3 137 51.1
CANSAT80G2783 Cannabis sativa HOM05D005804 ORTHO05D006849 2.8e-27 125.9 137 52.6
MELO3C002363.2 Cucumis melo HOM05D005804 ORTHO05D006849 3.6e-27 125.6 156 46.8
CsaV3_1G009670 Cucumis sativus L. HOM05D005804 ORTHO05D006849 3.6e-27 125.6 156 46.8
FvH4_5g08360 Fragaria vesca HOM05D005804 ORTHO05D006849 4.7e-27 125.2 148 48.6
Peaxi162Scf00171g00421 Petunia axillaris HOM05D005804 ORTHO05D006849 4.7e-27 125.2 143 48.3
MD14G1156600 Malus domestica HOM05D005804 ORTHO05D006849 6.2e-27 124.8 156 48.7
Solyc03g098330.2 Solanum lycopersicum HOM05D005804 ORTHO05D006849 1.4e-26 123.6 151 46.4
arahy.Tifrunner.gnm1.ann1.I073XK Arachis hypogaea HOM05D005804 ORTHO05D006849 1.8e-26 123.2 139 51.8
CAN.G1631.5 Capsicum annuum HOM05D005606 ORTHO05D006446 2.3e-26 122.9 151 47.7
DCAR_007491 Daucus carota HOM05D005804 ORTHO05D006849 2.3e-26 122.9 121 53.7
Sopen03g029080 Solanum pennellii HOM05D005804 ORTHO05D006849 2.3e-26 122.9 151 46.4
CiPaw.12G043400 Carya illinoinensis HOM05D005804 ORTHO05D006849 3.1e-26 122.5 131 55.0
Manes.14G051001 Manihot esculenta HOM05D005804 ORTHO05D006849 3.1e-26 122.5 145 51.7
Cpa.g.sc13.112 Carica papaya HOM05D005804 ORTHO05D006849 1.2e-25 120.6 143 46.9
Nitab4.5_0010950g0010 Nicotiana tabacum HOM05D005804 ORTHO05D006849 3.4e-25 119.0 151 46.4
PSO478G1623 Papaver somniferum HOM05D005804 ORTHO05D006849 4.4e-25 118.6 113 57.5
Eucgr.K02724 Eucalyptus grandis HOM05D005804 ORTHO05D006849 5.8e-25 118.2 110 58.2
PGSC0003DMG400025629 Solanum tuberosum HOM05D005804 ORTHO05D006849 5.8e-25 118.2 151 45.0
Migut.O00254 Erythranthe guttata HOM05D005804 ORTHO05D006849 1.3e-24 117.1 145 45.5
ClCG03G003790 Citrullus lanatus HOM05D005804 ORTHO05D006849 3.7e-24 115.5 134 48.5
MBI11_g05331_MAGBIO Magnolia biondii HOM05D005804 ORTHO05D006849 4.9e-24 115.2 113 52.2
THA.LOC104825017 Tarenaya hassleriana HOM05D005804 ORTHO05D006849 4.9e-24 115.2 124 49.2
unitig_26.g9610 Utricularia gibba HOM05D005804 ORTHO05D006849 8.3e-24 114.4 131 45.0
SalBow8G2935 Salvia bowleyana HOM05D005804 ORTHO05D006849 1.1e-23 114.0 96 58.3
Hund02443 Selenicereus undatus HOM05D005804 ORTHO05D006849 1.1e-23 114.0 116 51.7
CARHR232300 Cardamine hirsuta HOM05D005804 ORTHO05D006849 3.2e-23 112.5 146 45.2
Sc22g0003840 Simmondsia chinensis HOM05D005804 ORTHO05D006849 3.2e-23 112.5 116 53.4
Ciclev10031832m.g Citrus clementina HOM05D005804 ORTHO05D006849 5.4e-23 111.7 88 64.8
SHI10578 Sapria himalayana HOM05D005804 ORTHO05D006849 7.1e-23 111.3 104 54.8
Thhalv10025155m.g Eutrema salsugineum HOM05D005804 ORTHO05D006849 1.2e-22 110.5 147 43.5
AL7G28300 Arabidopsis lyrata HOM05D005804 ORTHO05D006849 1.6e-22 110.2 147 42.9
AT4G24900 Arabidopsis thaliana HOM05D005804 ORTHO05D006849 3.5e-22 109.0 146 42.5
vmacro16720 Vaccinium macrocarpon HOM05D005804 ORTHO05D006849 4.6e-22 108.6 127 49.6
EL10Ac5g11407 Beta vulgaris HOM05D005804 ORTHO05D006849 6.0e-22 108.2 147 42.9
Carub.0007s1616 Capsella rubella HOM05D005804 ORTHO05D006849 1.3e-21 107.1 146 43.2
VMungo1309G0122 Vigna mungo HOM05D005804 ORTHO05D006849 1.7e-21 106.7 144 45.8
Lsat_1_v5_gn_1_33221 Lactuca sativa HOM05D005804 ORTHO05D006849 3.0e-21 105.9 137 46.0
Atru.chr6.1796 Acer truncatum HOM05D005804 ORTHO05D006849 8.6e-21 104.4 124 50.8
Glyma.06G170000 Glycine max HOM05D005804 ORTHO05D006849 5.6e-20 101.7 152 42.1
HPP92_013611 Vanilla planifolia HOM05D005804 ORTHO05D006849 7.3e-20 101.3 127 42.5
Atru.chr12.1219 Acer truncatum HOM05D005804 ORTHO05D006849 9.5e-20 100.9 126 49.2
Sp7g22880 Schrenkiella parvula HOM05D005804 ORTHO05D006849 1.6e-19 100.1 125 44.8
BraA01t01555Z Brassica rapa HOM05D005804 ORTHO05D006849 3.6e-19 99.0 121 43.8
CDE05G3468 Ceratophyllum demersum HOM05D005804 ORTHO05D006849 3.6e-19 99.0 115 47.8
AUR62029607 Chenopodium quinoa HOM05D005804 ORTHO05D006849 3.6e-19 99.0 116 46.6
A01p16190 Brassica napus HOM05D005804 ORTHO05D006849 4.7e-19 98.6 121 43.8
BcaNung06008 Brassica carinata HOM05D005804 ORTHO05D006849 2.0e-17 93.2 117 42.7
Zm00001eb102430 Zea mays HOM05D005804 ORTHO05D006849 2.6e-17 92.8 126 41.3
BcaC09g52237 Brassica carinata HOM05D005804 ORTHO05D006849 4.4e-17 92.0 103 47.6
BolC1t01947H Brassica oleracea HOM05D005804 ORTHO05D006849 4.4e-17 92.0 117 42.7
Ah.02g114880 Amaranthus hybridus HOM05D005804 ORTHO05D006849 2.2e-16 89.7 105 45.7
C01p20180 Brassica napus HOM05D005804 ORTHO05D006849 2.9e-16 89.4 117 41.9
Aa31LG7G10880 Aethionema arabicum HOM05D005804 ORTHO05D006849 8.4e-16 87.8 116 42.2
ATR0178G002 Amborella trichopoda HOM05D005804 ORTHO05D006849 1.0e-13 80.9 156 37.8
Zm00001eb317740 Zea mays HOM05D005804 ORTHO05D006849 3.3e-12 75.9 123 41.5
Mapoly0096s0043 Marchantia polymorpha HOM05D005804 ORTHO05D006849 9.6e-12 74.3 133 37.6
CSS0025658 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 2.1e-11 73.2 100 46.0
SEGI_03962 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 4.7e-11 72.0 90 46.7
SEGI_29979 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 4.7e-11 72.0 90 46.7
Pp3c6_21480 Physcomitrium patens HOM05D005804 ORTHO05D006849 8.1e-11 71.2 108 45.4
AagrBONN_evm.TU.Sc2ySwM_362.247 Anthoceros agrestis HOM05D005804 ORTHO05D006849 4.0e-10 68.9 124 41.1
Actinidia36808 Actinidia chinensis HOM05D005804 ORTHO05D006849 8.4e-08 61.2 43 72.1
SMO133G0032 Selaginella moellendorffii HOM05D005804 ORTHO05D006849 1.2e-06 57.4 127 33.1


User provided reference genes

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