Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv11157 Davidia involucrata HOM05D005613 ORTHO05D006903 1.5e-169 599.4 290 100.0
Actinidia15836 Actinidia chinensis HOM05D005613 ORTHO05D006903 1.9e-156 555.8 285 91.9
CSS0000406 Camellia sinensis var. sinensis HOM05D005613 ORTHO05D006903 2.8e-155 552.0 286 90.6
MD14G1159000 Malus domestica HOM05D005613 ORTHO05D006903 1.2e-150 536.6 290 86.2
MD06G1143700 Malus domestica HOM05D005613 ORTHO05D006903 3.5e-150 535.0 290 85.5
TAR371G0420 Trochodendron aralioides HOM05D005613 ORTHO05D006903 3.5e-150 535.0 290 86.9
Eucgr.K02737 Eucalyptus grandis HOM05D005613 ORTHO05D006903 1.0e-149 533.5 281 88.3
CANSAT80G2472 Cannabis sativa HOM05D005613 ORTHO05D006903 2.3e-149 532.3 290 85.9
PGR044G0561 Punica granatum HOM05D005613 ORTHO05D006903 9.5e-148 526.9 287 85.4
Prupe.5G152900 Prunus persica HOM05D005613 ORTHO05D006903 8.1e-147 523.9 281 87.5
CiPaw.11G009100 Carya illinoinensis HOM05D005613 ORTHO05D006903 5.2e-146 521.2 295 85.4
MSTRG.17588 Avicennia marina HOM05D005613 ORTHO05D006903 6.8e-146 520.8 286 84.3
Manes.06G118100 Manihot esculenta HOM05D005613 ORTHO05D006903 8.9e-146 520.4 290 84.1
Haze_07235 Corylus avellana HOM05D005613 ORTHO05D006903 1.5e-145 519.6 323 78.6
GSVIVG01008514001 Vitis vinifera HOM05D005613 ORTHO05D006903 2.6e-145 518.8 290 84.8
Thecc.03G126700 Theobroma cacao HOM05D005613 ORTHO05D006903 3.4e-145 518.5 285 85.6
Glyma.06G171500 Glycine max HOM05D005613 ORTHO05D006903 5.8e-145 517.7 280 86.1
Potri.015G093500 Populus trichocarpa HOM05D005613 ORTHO05D006903 9.9e-145 516.9 293 82.6
RcHm_v2.0_Chr7g0190451 Rosa chinensis HOM05D005613 ORTHO05D006903 1.3e-144 516.5 286 84.6
Manes.14G052800 Manihot esculenta HOM05D005613 ORTHO05D006903 1.7e-144 516.2 290 84.1
TWI39G1237 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 1.7e-144 516.2 290 82.8
Glyma.04G194500 Glycine max HOM05D005613 ORTHO05D006903 2.2e-144 515.8 280 85.7
Aqoxy5G04126 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 3.7e-144 515.0 275 86.5
TWI23G0755 Tripterygium wilfordii HOM05D005613 ORTHO05D006903 1.4e-143 513.1 286 82.9
Duzib205G1234 Durio zibethinus HOM05D005613 ORTHO05D006903 1.9e-143 512.7 286 85.7
FvH4_5g07950 Fragaria vesca HOM05D005613 ORTHO05D006903 1.2e-142 510.0 287 82.2
Phvul.009G167500 Phaseolus vulgaris HOM05D005613 ORTHO05D006903 1.2e-142 510.0 280 85.7
Actinidia25589 Actinidia chinensis HOM05D005613 ORTHO05D006903 3.5e-142 508.4 255 93.3
QL10p004191 Quercus lobata HOM05D005613 ORTHO05D006903 6.0e-142 507.7 294 82.7
Ciclev10021465m.g Citrus clementina HOM05D005613 ORTHO05D006903 7.8e-142 507.3 292 82.5
Lj9C477T8 Lonicera japonica HOM05D005613 ORTHO05D006903 1.3e-141 506.5 292 84.9
Lj1g0013310 Lotus japonicus HOM05D005613 ORTHO05D006903 3.0e-141 505.4 280 85.0
QL10p004130 Quercus lobata HOM05D005613 ORTHO05D006903 5.1e-141 504.6 294 82.3
Gohir.D07G056300 Gossypium hirsutum HOM05D005613 ORTHO05D006903 1.1e-140 503.4 286 83.9
Gorai.001G059700 Gossypium raimondii HOM05D005613 ORTHO05D006903 1.1e-140 503.4 286 83.9
Lsat_1_v5_gn_4_76740 Lactuca sativa HOM05D005613 ORTHO05D006903 1.1e-140 503.4 288 83.3
Gohir.A07G051800 Gossypium hirsutum HOM05D005613 ORTHO05D006903 1.5e-140 503.1 286 84.3
THA.LOC104803145 Tarenaya hassleriana HOM05D005613 ORTHO05D006903 1.9e-140 502.7 286 80.4
CAN.G767.35 Capsicum annuum HOM05D005613 ORTHO05D006903 2.5e-140 502.3 280 82.5
PSO017G2706 Papaver somniferum HOM05D005613 ORTHO05D006903 2.5e-140 502.3 288 83.3
Medtr3g089010 Medicago truncatula HOM05D005613 ORTHO05D006903 7.3e-140 500.7 287 84.0
PSO478G0845 Papaver somniferum HOM05D005613 ORTHO05D006903 7.3e-140 500.7 286 82.9
HanXRQChr09g0273061 Helianthus annuus HOM05D005613 ORTHO05D006903 2.8e-139 498.8 288 82.6
Psat5g169720 Pisum sativum HOM05D005613 ORTHO05D006903 3.6e-139 498.4 280 84.3
Rhsim08G0188600 Rhododendron simsii HOM05D005613 ORTHO05D006903 3.6e-139 498.4 285 85.6
ECA232G4063 Erigeron canadensis HOM05D005613 ORTHO05D006903 1.1e-138 496.9 284 82.7
Nitab4.5_0007541g0020 Nicotiana tabacum HOM05D005613 ORTHO05D006903 1.8e-138 496.1 282 81.6
Migut.N02308 Erythranthe guttata HOM05D005613 ORTHO05D006903 3.1e-138 495.4 281 82.2
PSO017G3077 Papaver somniferum HOM05D005613 ORTHO05D006903 3.1e-138 495.4 276 83.7
SalBow7G2516 Salvia bowleyana HOM05D005613 ORTHO05D006903 3.1e-138 495.4 289 81.0
Dinv04871 Davidia involucrata HOM05D005613 ORTHO05D006903 6.8e-138 494.2 292 83.9
Nitab4.5_0011040g0030 Nicotiana tabacum HOM05D005613 ORTHO05D006903 6.8e-138 494.2 282 81.6
PSO675G0985 Papaver somniferum HOM05D005613 ORTHO05D006903 6.8e-138 494.2 276 83.3
Cc07_g17610 Coffea canephora HOM05D005613 ORTHO05D006903 3.4e-137 491.9 276 81.5
TPR.G26132 Trifolium pratense HOM05D005613 ORTHO05D006903 5.8e-137 491.1 306 78.4
Lalb_Chr11g0069651 Lupinus albus HOM05D005613 ORTHO05D006903 9.9e-137 490.3 283 80.9
VMungo1309G0937 Vigna mungo HOM05D005613 ORTHO05D006903 1.3e-136 490.0 265 87.2
Solyc12g098640.3 Solanum lycopersicum HOM05D005613 ORTHO05D006903 2.9e-136 488.8 282 79.4
Peaxi162Scf00378g00519 Petunia axillaris HOM05D005613 ORTHO05D006903 4.9e-136 488.0 282 81.2
Aa31LG3G6910 Aethionema arabicum HOM05D005613 ORTHO05D006903 1.1e-135 486.9 281 80.8
Sopen12g033400 Solanum pennellii HOM05D005613 ORTHO05D006903 1.1e-135 486.9 282 78.7
AL8G24500 Arabidopsis lyrata HOM05D005613 ORTHO05D006903 1.9e-135 486.1 277 80.9
AT5G50375 Arabidopsis thaliana HOM05D005613 ORTHO05D006903 1.9e-135 486.1 275 81.8
MELO3C002354.2 Cucumis melo HOM05D005613 ORTHO05D006903 1.9e-135 486.1 288 80.6
CARHR258110 Cardamine hirsuta HOM05D005613 ORTHO05D006903 4.2e-135 485.0 277 80.1
PGSC0003DMG400004674 Solanum tuberosum HOM05D005613 ORTHO05D006903 4.2e-135 485.0 275 80.7
CsaV3_1G009570 Cucumis sativus L. HOM05D005613 ORTHO05D006903 5.4e-135 484.6 288 80.2
Cc00_g03610 Coffea canephora HOM05D005613 ORTHO05D006903 1.2e-134 483.4 278 80.6
Carub.0008s1047 Capsella rubella HOM05D005613 ORTHO05D006903 3.5e-134 481.9 275 80.4
Hund02427 Selenicereus undatus HOM05D005613 ORTHO05D006903 1.7e-133 479.6 290 77.6
arahy.Tifrunner.gnm1.ann1.91S2FI Arachis hypogaea HOM05D005613 ORTHO05D006903 3.9e-133 478.4 301 77.4
SpUn0050_0040 Schrenkiella parvula HOM05D005613 ORTHO05D006903 5.1e-133 478.0 276 80.1
FAN13G2894 Fragaria x ananassa HOM05D005613 ORTHO05D006903 6.6e-133 477.6 285 79.3
BcaC01g04807 Brassica carinata HOM05D005613 ORTHO05D006903 8.7e-133 477.2 275 80.7
DCAR_016405 Daucus carota HOM05D005613 ORTHO05D006903 8.7e-133 477.2 280 80.7
BcaB01g02892 Brassica carinata HOM05D005613 ORTHO05D006903 7.3e-132 474.2 275 80.0
C03p33570 Brassica napus HOM05D005613 ORTHO05D006903 7.3e-132 474.2 281 79.7
A03p27830 Brassica napus HOM05D005613 ORTHO05D006903 6.2e-131 471.1 286 78.0
BolC3t15677H Brassica oleracea HOM05D005613 ORTHO05D006903 6.2e-131 471.1 283 78.8
Thhalv10014300m.g Eutrema salsugineum HOM05D005613 ORTHO05D006903 8.1e-131 470.7 273 79.5
Sed0021273 Sechium edule HOM05D005613 ORTHO05D006903 1.1e-130 470.3 273 81.7
ClCG03G003690 Citrullus lanatus HOM05D005613 ORTHO05D006903 1.8e-130 469.5 325 71.4
DCAR_021614 Daucus carota HOM05D005613 ORTHO05D006903 1.8e-130 469.5 280 78.9
BraA03t11994Z Brassica rapa HOM05D005613 ORTHO05D006903 2.4e-130 469.2 288 77.1
FAN18G4059 Fragaria x ananassa HOM05D005613 ORTHO05D006903 2.4e-130 469.2 327 70.3
EL10Ac5g11023 Beta vulgaris HOM05D005613 ORTHO05D006903 2.6e-129 465.7 273 78.8
AUR62032039 Chenopodium quinoa HOM05D005613 ORTHO05D006903 4.4e-129 464.9 279 77.4
Sed0001462 Sechium edule HOM05D005613 ORTHO05D006903 1.7e-128 463.0 280 79.3
arahy.Tifrunner.gnm1.ann1.AY81KB Arachis hypogaea HOM05D005613 ORTHO05D006903 2.2e-128 462.6 280 80.0
A09p55960 Brassica napus HOM05D005613 ORTHO05D006903 3.8e-128 461.8 275 78.9
BraA09t40998Z Brassica rapa HOM05D005613 ORTHO05D006903 3.8e-128 461.8 275 78.9
unitig_27.g24986 Utricularia gibba HOM05D005613 ORTHO05D006903 4.2e-127 458.4 282 75.2
vmacro19214 Vaccinium macrocarpon HOM05D005613 ORTHO05D006903 1.2e-126 456.8 371 65.5
Sabra15G0115100 Salix brachista HOM05D005613 ORTHO05D006903 2.7e-126 455.7 304 73.0
BolC8t51467H Brassica oleracea HOM05D005613 ORTHO05D006903 3.5e-126 455.3 273 78.0
C08p38940 Brassica napus HOM05D005613 ORTHO05D006903 1.0e-125 453.8 273 77.7
BcaB08g35134 Brassica carinata HOM05D005613 ORTHO05D006903 1.7e-125 453.0 271 77.5
Nn4g22373 Nelumbo nucifera HOM05D005613 ORTHO05D006903 8.7e-125 450.7 282 76.6
Zm00001eb265520 Zea mays HOM05D005613 ORTHO05D006903 1.1e-124 450.3 271 78.2
ATR0680G053 Amborella trichopoda HOM05D005613 ORTHO05D006903 1.8e-122 443.0 273 75.1
SEGI_09495 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 6.9e-122 441.0 274 75.9
CDE02G3999 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 2.0e-121 439.5 275 75.3
FAN08G1682 Fragaria x ananassa HOM05D005613 ORTHO05D006903 5.8e-121 438.0 313 69.3
BcaC07g40897 Brassica carinata HOM05D005613 ORTHO05D006903 7.9e-118 427.6 277 74.0
arahy.Tifrunner.gnm1.ann1.LN4RIT Arachis hypogaea HOM05D005613 ORTHO05D006903 6.2e-115 417.9 238 82.4
unitig_699.g19129 Utricularia gibba HOM05D005613 ORTHO05D006903 4.0e-114 415.2 271 71.2
COL.COLO4_28085 Corchorus olitorius HOM05D005613 ORTHO05D006903 7.9e-110 401.0 222 83.3
Cpa.g.sc13.142 Carica papaya HOM05D005613 ORTHO05D006903 1.0e-109 400.6 227 85.0
AUR62036512 Chenopodium quinoa HOM05D005613 ORTHO05D006903 2.6e-105 386.0 241 74.7
CiPaw.12G041000 Carya illinoinensis HOM05D005613 ORTHO05D006903 1.7e-104 383.3 199 89.9
BcaB05g24059 Brassica carinata HOM05D005613 ORTHO05D006903 2.2e-104 382.9 295 65.4
Aqoxy22s001 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 8.5e-104 380.9 198 89.4
CDE09G1331 Ceratophyllum demersum HOM05D005613 ORTHO05D006903 9.3e-103 377.5 275 67.3
SMO180G0005 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 1.8e-98 363.2 276 59.4
SpUn0508_0010 Schrenkiella parvula HOM05D005613 ORTHO05D006903 6.9e-98 361.3 210 78.1
Mapoly0019s0004 Marchantia polymorpha HOM05D005613 ORTHO05D006903 9.4e-95 350.9 290 56.2
Aqoxy1G01617 Aquilegia oxysepala HOM05D005613 ORTHO05D006903 2.3e-93 346.3 220 76.4
Pp3c14_22450 Physcomitrium patens HOM05D005613 ORTHO05D006903 3.3e-92 342.4 272 59.2
SHI39270 Sapria himalayana HOM05D005613 ORTHO05D006903 1.5e-89 333.6 189 83.1
SHI42710 Sapria himalayana HOM05D005613 ORTHO05D006903 1.5e-89 333.6 189 83.1
AagrBONN_evm.TU.Sc2ySwM_362.2466 Anthoceros agrestis HOM05D005613 ORTHO05D006903 1.6e-78 297.0 226 61.5
AUR62032713 Chenopodium quinoa HOM05D005613 ORTHO05D006903 1.4e-77 293.9 229 63.8
SGA_v2.0_scaffold42G16110 Striga asiatica HOM05D005613 ORTHO05D006903 1.2e-76 290.8 306 52.6
Cre16.g657300 Chlamydomonas reinhardtii HOM05D005613 ORTHO05D006903 1.7e-72 276.9 275 50.9
SGA_v2.0_scaffold115G32075 Striga asiatica HOM05D005613 ORTHO05D006903 2.8e-67 259.6 155 76.8
AagrBONN_evm.TU.Sc2ySwM_117.1130 Anthoceros agrestis HOM05D005613 ORTHO05D006903 5.4e-66 255.4 188 62.2
HPP92_006202 Vanilla planifolia HOM05D005613 ORTHO05D006903 3.5e-65 252.7 156 77.6
CBR_g48821 Chara braunii HOM05D005613 ORTHO05D006903 1.4e-58 230.7 210 49.5
SMO353G0009 Selaginella moellendorffii HOM05D005613 ORTHO05D006903 1.1e-55 221.1 266 46.2
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 2.1e-54 216.9 131 74.0
SGA_v2.0_scaffold115G32072 Striga asiatica HOM05D000001 ORTHO05D000003 3.5e-49 199.5 191 53.4
HPP92_006201 Vanilla planifolia HOM05D005613 ORTHO05D006903 1.9e-39 167.2 106 73.6
PRCOL_00007276 Prasinoderma coloniale HOM05D005613 ORTHO05D006903 2.0e-36 157.1 274 36.9
MCO03G530 Micromonas commoda HOM05D005613 ORTHO05D006903 1.4e-34 151.0 211 38.4
SGA_v2.0_scaffold3G01513 Striga asiatica HOM05D005613 ORTHO05D006903 2.4e-34 150.2 113 65.5
Os11g0302500 Oryza sativa ssp. japonica HOM05D005613 ORTHO05D006903 2.3e-29 133.7 85 71.8
CBR_g48823 Chara braunii HOM05D005613 ORTHO05D006903 4.6e-17 92.8 72 62.5
SEGI_05867 Sequoiadendron giganteum HOM05D005613 ORTHO05D006903 8.1e-14 82.0 43 83.7
arahy.Tifrunner.gnm1.ann1.W1BQBA Arachis hypogaea HOM05D005613 ORTHO05D006903 6.9e-13 79.0 45 80.0


User provided reference genes

Program Settings