Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv11133 Davidia involucrata HOM05D002957 ORTHO05D007941 1.6e-58 229.2 114 100.0
vmacro22887 Vaccinium macrocarpon HOM05D002957 ORTHO05D007941 2.9e-31 138.7 75 84.0
vmacro23142 Vaccinium macrocarpon HOM05D002957 ORTHO05D007941 2.9e-31 138.7 75 84.0
Dinv38506 Davidia involucrata HOM05D002957 ORTHO05D007941 3.8e-31 138.3 75 86.7
Rhsim12G0169500 Rhododendron simsii HOM05D002957 ORTHO05D007941 4.9e-31 137.9 75 85.3
CSS0023443 Camellia sinensis var. sinensis HOM05D002957 ORTHO05D007941 8.4e-31 137.1 75 85.3
CSS0001501 Camellia sinensis var. sinensis HOM05D002957 ORTHO05D007941 1.1e-30 136.7 75 86.7
TAR622G0090 Trochodendron aralioides HOM05D002957 ORTHO05D007941 1.1e-30 136.7 81 79.0
Nn3g16664 Nelumbo nucifera HOM05D002957 ORTHO05D007941 1.9e-30 136.0 75 82.7
Actinidia36761 Actinidia chinensis HOM05D002957 ORTHO05D007941 3.2e-30 135.2 75 86.7
QL10p006228 Quercus lobata HOM05D002957 ORTHO05D007941 4.1e-30 134.8 75 82.7
Lsat_1_v5_gn_1_28561 Lactuca sativa HOM05D002957 ORTHO05D007941 5.4e-30 134.4 75 82.7
QL03p060389 Quercus lobata HOM05D002957 ORTHO05D007941 9.2e-30 133.7 75 81.3
GSVIVG01007604001 Vitis vinifera HOM05D002957 ORTHO05D007941 9.2e-30 133.7 75 80.0
Cfa019259 Carpinus fangiana HOM05D002957 ORTHO05D007941 1.2e-29 133.3 75 84.0
ECA247G2183 Erigeron canadensis HOM05D002957 ORTHO05D007941 1.6e-29 132.9 75 81.3
Oeu063270.2 Olea europaea HOM05D002957 ORTHO05D007941 1.6e-29 132.9 75 84.0
ATR0199G004 Amborella trichopoda HOM05D002957 ORTHO05D007941 3.5e-29 131.7 87 70.1
ClCG06G017470 Citrullus lanatus HOM05D002957 ORTHO05D007941 3.5e-29 131.7 75 82.7
Atru.chr9.2618 Acer truncatum HOM05D002957 ORTHO05D007941 6.0e-29 131.0 75 80.0
MD06G1224500 Malus domestica HOM05D002957 ORTHO05D007941 6.0e-29 131.0 75 82.7
HanXRQChr02g0035391 Helianthus annuus HOM05D002957 ORTHO05D007941 7.8e-29 130.6 75 81.3
Hma1.2p1_1092F.1_g255870 Hydrangea macrophylla HOM05D002957 ORTHO05D007941 7.8e-29 130.6 75 80.0
Hma1.2p1_1092F.1_g255880 Hydrangea macrophylla HOM05D002957 ORTHO05D007941 7.8e-29 130.6 75 80.0
CiPaw.11G016500 Carya illinoinensis HOM05D002957 ORTHO05D007941 1.0e-28 130.2 75 81.3
PSO063G7275 Papaver somniferum HOM05D002957 ORTHO05D007941 1.0e-28 130.2 81 77.8
PSO210G3123 Papaver somniferum HOM05D002957 ORTHO05D007941 1.0e-28 130.2 81 77.8
Lj5A132G82 Lonicera japonica HOM05D002957 ORTHO05D007941 1.7e-28 129.4 74 82.4
Prupe.5G163400 Prunus persica HOM05D002957 ORTHO05D007941 3.0e-28 128.6 75 81.3
AUR62022097 Chenopodium quinoa HOM05D002957 ORTHO05D007941 3.9e-28 128.3 75 81.3
CsaV3_1G000990 Cucumis sativus L. HOM05D002957 ORTHO05D007941 3.9e-28 128.3 75 78.7
Aqoxy5G03698 Aquilegia oxysepala HOM05D002957 ORTHO05D007941 5.1e-28 127.9 75 76.0
MELO3C026250.2 Cucumis melo HOM05D002957 ORTHO05D007941 6.6e-28 127.5 75 78.7
Migut.O00181 Erythranthe guttata HOM05D002957 ORTHO05D007941 6.6e-28 127.5 75 78.7
Gohir.A12G185900 Gossypium hirsutum HOM05D002957 ORTHO05D007941 8.6e-28 127.1 75 76.0
Cc04_g11180 Coffea canephora HOM05D002957 ORTHO05D007941 1.1e-27 126.7 75 78.7
Duzib084G0342 Durio zibethinus HOM05D002957 ORTHO05D007941 1.5e-27 126.3 75 76.0
Gohir.D12G188700 Gossypium hirsutum HOM05D002957 ORTHO05D007941 1.5e-27 126.3 75 76.0
Gorai.008G202600 Gossypium raimondii HOM05D002957 ORTHO05D007941 1.5e-27 126.3 75 76.0
Ciclev10021427m.g Citrus clementina HOM05D002957 ORTHO05D007941 1.9e-27 125.9 75 76.0
FvH4_5g06601 Fragaria vesca HOM05D002957 ORTHO05D007941 2.5e-27 125.6 75 77.3
FAN18G4082 Fragaria x ananassa HOM05D000025 ORTHO05D007941 2.5e-27 125.6 75 77.3
SalBow5G1405 Salvia bowleyana HOM05D002957 ORTHO05D007941 2.5e-27 125.6 75 80.0
DCAR_026193 Daucus carota HOM05D002957 ORTHO05D007941 3.3e-27 125.2 75 76.0
Sed0027100 Sechium edule HOM05D002957 ORTHO05D007941 3.3e-27 125.2 75 78.7
EL10Ac7g18022 Beta vulgaris HOM05D002957 ORTHO05D007941 4.3e-27 124.8 75 78.7
Psat5g117640 Pisum sativum HOM05D002957 ORTHO05D007941 5.6e-27 124.4 75 74.7
Phvul.009G171900 Phaseolus vulgaris HOM05D002957 ORTHO05D007941 7.3e-27 124.0 75 74.7
Ah.08g218480 Amaranthus hybridus HOM05D002957 ORTHO05D007941 9.6e-27 123.6 75 76.0
FAN08G0527 Fragaria x ananassa HOM05D002957 ORTHO05D007941 9.6e-27 123.6 75 76.0
Manes.06G111900 Manihot esculenta HOM05D002957 ORTHO05D007941 9.6e-27 123.6 75 72.0
CANSAT80G1905 Cannabis sativa HOM05D002957 ORTHO05D007941 1.6e-26 122.9 75 74.7
Thecc.03G117300 Theobroma cacao HOM05D002957 ORTHO05D007941 1.6e-26 122.9 74 74.3
TPR.G35599 Trifolium pratense HOM05D002957 ORTHO05D007941 2.1e-26 122.5 75 72.0
RcHm_v2.0_Chr7g0192141 Rosa chinensis HOM05D002957 ORTHO05D007941 2.8e-26 122.1 75 74.7
Nitab4.5_0000025g0240 Nicotiana tabacum HOM05D002957 ORTHO05D007941 3.6e-26 121.7 75 74.7
Nitab4.5_0001377g0020 Nicotiana tabacum HOM05D002957 ORTHO05D007941 3.6e-26 121.7 75 74.7
arahy.Tifrunner.gnm1.ann1.DF1MTK Arachis hypogaea HOM05D002957 ORTHO05D007941 4.7e-26 121.3 75 70.7
PGR083G0505 Punica granatum HOM05D002957 ORTHO05D007941 4.7e-26 121.3 74 75.7
Glyma.06G175800 Glycine max HOM05D002957 ORTHO05D007941 6.2e-26 120.9 75 70.7
Lj1g0012275 Lotus japonicus HOM05D002957 ORTHO05D007941 6.2e-26 120.9 81 67.9
Lalb_Chr11g0069861 Lupinus albus HOM05D002957 ORTHO05D007941 6.2e-26 120.9 75 70.7
Potri.015G086100 Populus trichocarpa HOM05D002957 ORTHO05D007941 8.1e-26 120.6 75 72.0
Lj1g0016898 Lotus japonicus HOM05D002957 ORTHO05D007941 1.8e-25 119.4 81 66.7
Medtr3g075540 Medicago truncatula HOM05D002957 ORTHO05D007941 1.8e-25 119.4 75 69.3
arahy.Tifrunner.gnm1.ann1.0G1QRI Arachis hypogaea HOM05D002957 ORTHO05D007941 2.4e-25 119.0 75 69.3
Haze_07617 Corylus avellana HOM05D002957 ORTHO05D007941 2.4e-25 119.0 108 59.3
Eucgr.B00193 Eucalyptus grandis HOM05D002957 ORTHO05D007941 2.4e-25 119.0 74 74.3
Sabra15G0109000 Salix brachista HOM05D002957 ORTHO05D007941 2.4e-25 119.0 75 70.7
Peaxi162Scf00801g00733 Petunia axillaris HOM05D002957 ORTHO05D007941 3.1e-25 118.6 75 73.3
Aa31LG7G11100 Aethionema arabicum HOM05D002957 ORTHO05D007941 6.9e-25 117.5 74 74.3
VMungo1309G1657 Vigna mungo HOM05D002957 ORTHO05D007941 6.9e-25 117.5 75 70.7
Sc04g0001210 Simmondsia chinensis HOM05D002957 ORTHO05D007941 8.9e-25 117.1 74 73.0
CARHR232120 Cardamine hirsuta HOM05D002957 ORTHO05D007941 1.5e-24 116.3 74 73.0
Solyc12g021340.3 Solanum lycopersicum HOM05D002957 ORTHO05D007941 2.0e-24 115.9 75 73.3
Sopen12g011690 Solanum pennellii HOM05D002957 ORTHO05D007941 2.0e-24 115.9 75 73.3
AL7G28440 Arabidopsis lyrata HOM05D002957 ORTHO05D007941 2.6e-24 115.5 74 73.0
AT4G24750 Arabidopsis thaliana HOM05D002957 ORTHO05D007941 3.4e-24 115.2 74 71.6
Thhalv10025885m.g Eutrema salsugineum HOM05D002957 ORTHO05D007941 4.4e-24 114.8 74 71.6
Zm00001eb246160 Zea mays HOM05D002957 ORTHO05D007941 7.6e-24 114.0 74 68.9
BcaC09g50835 Brassica carinata HOM05D002957 ORTHO05D007941 9.9e-24 113.6 74 71.6
A01p16060 Brassica napus HOM05D000434 ORTHO05D005992 9.9e-24 113.6 74 71.6
C01p20050 Brassica napus HOM05D000434 ORTHO05D001445 9.9e-24 113.6 74 71.6
BolC1t01932H Brassica oleracea HOM05D000434 ORTHO05D001445 9.9e-24 113.6 74 71.6
BraA01t01541Z Brassica rapa HOM05D000434 ORTHO05D001445 9.9e-24 113.6 74 71.6
Sp7g22730 Schrenkiella parvula HOM05D002957 ORTHO05D007941 1.7e-23 112.8 74 70.3
unitig_8.g3070 Utricularia gibba HOM05D002957 ORTHO05D007941 1.7e-23 112.8 75 68.0
Carub.0007s1631 Capsella rubella HOM05D002957 ORTHO05D007941 2.2e-23 112.5 74 70.3
Os02g0596000 Oryza sativa ssp. japonica HOM05D002957 ORTHO05D007941 2.9e-23 112.1 74 64.9
SMO364G0570 Selaginella moellendorffii HOM05D002957 ORTHO05D007941 7.1e-22 107.5 78 61.5
SGA_v2.0_scaffold90G27815 Striga asiatica HOM05D002957 ORTHO05D007941 9.3e-22 107.1 86 62.8
Sc04g0001230 Simmondsia chinensis HOM05D002957 ORTHO05D007941 4.6e-21 104.8 92 57.6
CDE08G0657 Ceratophyllum demersum HOM05D002957 ORTHO05D007941 7.8e-21 104.0 69 65.2
Pp3c6_20980 Physcomitrium patens HOM05D002957 ORTHO05D007941 5.6e-19 97.8 76 59.2
RcHm_v2.0_Chr1g0313851 Rosa chinensis HOM05D002957 ORTHO05D007941 1.3e-18 96.7 75 62.7
RcHm_v2.0_Chr2g0119491 Rosa chinensis HOM05D002957 ORTHO05D007941 1.3e-18 96.7 75 62.7
CBR_g34898 Chara braunii HOM05D002957 ORTHO05D007941 1.6e-18 96.3 78 56.4
Mapoly0042s0113 Marchantia polymorpha HOM05D002957 ORTHO05D007941 2.8e-18 95.5 75 58.7
MD14G1168400 Malus domestica HOM05D002957 ORTHO05D007941 3.6e-18 95.1 69 68.1
AagrBONN_evm.TU.Sc2ySwM_344.1972 Anthoceros agrestis HOM05D002957 ORTHO05D007941 6.2e-18 94.4 75 58.7
THA.LOC104809647 Tarenaya hassleriana HOM05D002957 ORTHO05D007941 8.1e-18 94.0 74 62.2
DCAR_011893 Daucus carota HOM05D002957 ORTHO05D007941 7.6e-16 87.4 58 67.2
Pp3c7_15530 Physcomitrium patens HOM05D002957 ORTHO05D007941 6.4e-15 84.3 75 52.0
Cpa.g.sc159.6 Carica papaya HOM05D002957 ORTHO05D007941 8.4e-15 84.0 74 63.5
CAN.G59.20 Capsicum annuum HOM05D002957 ORTHO05D007941 5.4e-14 81.3 51 66.7
TWI39G0012 Tripterygium wilfordii HOM05D002957 ORTHO05D007941 5.1e-12 74.7 45 73.3
COL.COLO4_37865 Corchorus olitorius HOM05D002957 ORTHO05D007941 9.6e-11 70.5 43 76.7
MBI10_g44128_MAGBIO Magnolia biondii HOM05D002957 ORTHO05D007941 3.6e-10 68.6 36 88.9
Eucgr.B00189 Eucalyptus grandis HOM05D002957 ORTHO05D007941 4.8e-10 68.2 55 56.4
vmacro16680 Vaccinium macrocarpon HOM05D002957 ORTHO05D007941 6.2e-10 67.8 41 75.6
RcHm_v2.0_Chr3g0475211 Rosa chinensis HOM05D002957 ORTHO05D007941 6.9e-09 64.3 39 69.2
SalBow5G3338 Salvia bowleyana HOM05D002957 ORTHO05D007941 1.3e-07 60.1 39 69.2
Sed0006401 Sechium edule HOM05D002957 ORTHO05D009332 1.1e-06 57.0 80 35.0
QL07p019780 Quercus lobata HOM05D002957 ORTHO05D009332 2.4e-06 55.8 80 36.2
CAN.G1004.2 Capsicum annuum HOM05D002957 ORTHO05D009332 3.2e-06 55.5 74 37.8
QL10p006239 Quercus lobata HOM05D002957 ORTHO05D337795 3.2e-06 55.5 35 80.0
COL.COLO4_14532 Corchorus olitorius HOM05D002957 ORTHO05D009332 9.3e-06 53.9 74 36.5
Lj3A953T52 Lonicera japonica HOM05D002957 ORTHO05D009332 9.3e-06 53.9 74 37.8


User provided reference genes

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