Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv11007 Davidia involucrata HOM05D001584 ORTHO05D001472 5.6e-77 290.8 142 100.0
Lj6A820T76 Lonicera japonica HOM05D001584 ORTHO05D001472 2.2e-49 199.1 150 66.0
Dinv14788 Davidia involucrata HOM05D001584 ORTHO05D001472 2.1e-47 192.6 170 60.6
vmacro01090 Vaccinium macrocarpon HOM05D001584 ORTHO05D001472 2.1e-47 192.6 174 57.5
Actinidia30682 Actinidia chinensis HOM05D001584 ORTHO05D001472 9.7e-45 183.7 171 55.6
CSS0025812 Camellia sinensis var. sinensis HOM05D001584 ORTHO05D001472 3.7e-44 181.8 172 58.1
Rhsim12G0035700 Rhododendron simsii HOM05D001584 ORTHO05D001472 1.1e-43 180.3 174 54.6
Prupe.1G234900 Prunus persica HOM05D001584 ORTHO05D001472 6.9e-43 177.6 166 56.0
Haze_12335 Corylus avellana HOM05D001584 ORTHO05D001472 9.1e-43 177.2 170 55.3
Cfa009303 Carpinus fangiana HOM05D001584 ORTHO05D001472 5.9e-42 174.5 170 55.3
Manes.12G016300 Manihot esculenta HOM05D001584 ORTHO05D001472 1.7e-41 172.9 159 57.2
MD13G1110000 Malus domestica HOM05D001584 ORTHO05D001472 2.9e-41 172.2 170 54.1
RcHm_v2.0_Chr4g0431591 Rosa chinensis HOM05D001584 ORTHO05D001472 3.8e-41 171.8 169 53.8
Hma1.2p1_0079F.1_g041660 Hydrangea macrophylla HOM05D001584 ORTHO05D001472 6.5e-41 171.0 171 56.7
MD16G1109900 Malus domestica HOM05D001584 ORTHO05D001472 3.2e-40 168.7 165 55.2
QL03p055318 Quercus lobata HOM05D001584 ORTHO05D001472 3.2e-40 168.7 169 52.7
TWI36G0930 Tripterygium wilfordii HOM05D001584 ORTHO05D001472 3.2e-40 168.7 139 63.3
TWI75G1571 Tripterygium wilfordii HOM05D001584 ORTHO05D001472 4.2e-40 168.3 163 56.4
FvH4_4g24590 Fragaria vesca HOM05D001584 ORTHO05D001472 5.5e-40 167.9 165 54.5
Cc11_g16450 Coffea canephora HOM05D001584 ORTHO05D001472 2.3e-38 162.5 151 54.3
Nitab4.5_0000139g0050 Nicotiana tabacum HOM05D001584 ORTHO05D001472 2.3e-38 162.5 167 51.5
Nitab4.5_0003164g0010 Nicotiana tabacum HOM05D001584 ORTHO05D001472 2.3e-38 162.5 167 51.5
Sc11g0000740 Simmondsia chinensis HOM05D001584 ORTHO05D001472 2.3e-38 162.5 172 51.2
PGSC0003DMG401015867 Solanum tuberosum HOM05D001584 ORTHO05D001472 3.0e-38 162.2 174 50.6
PGSC0003DMG402015867 Solanum tuberosum HOM05D001584 ORTHO05D001472 3.0e-38 162.2 174 50.6
Thecc.02G272800 Theobroma cacao HOM05D001584 ORTHO05D001472 3.0e-38 162.2 167 52.7
Sabra10G0050300 Salix brachista HOM05D001584 ORTHO05D001472 5.2e-38 161.4 146 60.3
TWI18G0706 Tripterygium wilfordii HOM05D001584 ORTHO05D001472 5.2e-38 161.4 164 54.9
TAR629G2794 Trochodendron aralioides HOM05D000918 ORTHO05D000791 5.2e-38 161.4 166 53.0
Potri.010G054600 Populus trichocarpa HOM05D001584 ORTHO05D001472 6.7e-38 161.0 146 61.0
CANSAT01G0198 Cannabis sativa HOM05D001584 ORTHO05D001472 8.8e-38 160.6 152 55.3
HanXRQChr06g0174831 Helianthus annuus HOM05D001584 ORTHO05D001472 1.1e-37 160.2 146 58.2
Manes.13G014400 Manihot esculenta HOM05D001584 ORTHO05D001472 1.1e-37 160.2 159 55.3
FAN07G2532 Fragaria x ananassa HOM05D001584 ORTHO05D001472 1.5e-37 159.8 165 54.5
Duzib268G0544 Durio zibethinus HOM05D001584 ORTHO05D001472 5.7e-37 157.9 170 50.6
Gorai.005G172600 Gossypium raimondii HOM05D001584 ORTHO05D001472 5.7e-37 157.9 170 50.0
CAN.G701.3 Capsicum annuum HOM05D001584 ORTHO05D001472 7.4e-37 157.5 174 48.9
Gohir.D02G155100 Gossypium hirsutum HOM05D001584 ORTHO05D001472 7.4e-37 157.5 170 50.0
Potri.008G179800 Populus trichocarpa HOM05D001584 ORTHO05D001472 1.3e-36 156.8 152 57.2
Gohir.A03G129800 Gossypium hirsutum HOM05D001584 ORTHO05D001472 1.7e-36 156.4 170 49.4
Dinv11002 Davidia involucrata HOM05D001584 ORTHO05D001472 2.2e-36 156.0 82 85.4
Sabra08G0137400 Salix brachista HOM05D001584 ORTHO05D001472 2.2e-36 156.0 153 58.2
PGR119G1735 Punica granatum HOM05D001584 ORTHO05D001472 1.4e-35 153.3 145 57.2
TPR.G17081 Trifolium pratense HOM05D001584 ORTHO05D001472 2.4e-35 152.5 162 53.1
Lsat_1_v5_gn_3_29360 Lactuca sativa HOM05D001584 ORTHO05D001472 2.0e-34 149.4 152 53.9
Solyc04g024940.3 Solanum lycopersicum HOM05D001584 ORTHO05D001472 1.0e-33 147.1 174 47.1
Ciclev10031334m.g Citrus clementina HOM05D001584 ORTHO05D001472 1.7e-33 146.4 157 52.2
Nn3g16563 Nelumbo nucifera HOM05D001584 ORTHO05D001472 1.7e-33 146.4 167 48.5
Nn4g22436 Nelumbo nucifera HOM05D001584 ORTHO05D001472 6.5e-33 144.4 170 47.1
Lsat_1_v5_gn_8_151920 Lactuca sativa HOM05D001584 ORTHO05D001472 1.5e-32 143.3 159 50.3
MELO3C011897.2 Cucumis melo HOM05D001584 ORTHO05D001472 1.9e-32 142.9 172 48.3
Gohir.A04G138300 Gossypium hirsutum HOM05D001584 ORTHO05D001472 4.2e-32 141.7 162 48.8
Gohir.D04G181200 Gossypium hirsutum HOM05D001584 ORTHO05D001472 4.2e-32 141.7 162 48.8
Duzib251G0666 Durio zibethinus HOM05D001584 ORTHO05D001472 5.5e-32 141.4 170 50.0
Gorai.012G174500 Gossypium raimondii HOM05D001584 ORTHO05D001472 7.2e-32 141.0 162 48.8
Duzib248G1478 Durio zibethinus HOM05D001584 ORTHO05D001472 9.4e-32 140.6 169 46.7
Atru.chr11.2224 Acer truncatum HOM05D001584 ORTHO05D001472 1.2e-31 140.2 104 67.3
HanXRQChr08g0207341 Helianthus annuus HOM05D001584 ORTHO05D001472 1.6e-31 139.8 137 56.9
VMungo0251G3593 Vigna mungo HOM05D001584 ORTHO05D001472 2.1e-31 139.4 122 63.1
Oeu038664.1 Olea europaea HOM05D001584 ORTHO05D001472 3.6e-31 138.7 180 42.2
TAR622G1066 Trochodendron aralioides HOM05D001584 ORTHO05D001472 4.7e-31 138.3 164 48.2
THA.LOC104824025 Tarenaya hassleriana HOM05D001584 ORTHO05D001472 6.1e-31 137.9 171 46.8
ClCG08G017370 Citrullus lanatus HOM05D001584 ORTHO05D001472 8.0e-31 137.5 166 48.2
Ca_18070_v3 Cicer arietinum L. HOM05D001584 ORTHO05D001472 1.0e-30 137.1 182 45.6
Medtr8g080000 Medicago truncatula HOM05D001584 ORTHO05D001472 1.4e-30 136.7 174 49.4
Psat7g079160 Pisum sativum HOM05D001584 ORTHO05D001472 1.4e-30 136.7 182 45.6
CsaV3_5G030570 Cucumis sativus L. HOM05D001584 ORTHO05D001472 2.3e-30 136.0 172 45.9
ClCG05G026260 Citrullus lanatus HOM05D001584 ORTHO05D001472 3.0e-30 135.6 144 51.4
Phvul.002G176800 Phaseolus vulgaris HOM05D001584 ORTHO05D001472 3.0e-30 135.6 118 62.7
Gohir.A12G146900 Gossypium hirsutum HOM05D001584 ORTHO05D001472 4.0e-30 135.2 170 47.1
Sed0024083 Sechium edule HOM05D001584 ORTHO05D001472 6.7e-30 134.4 170 48.2
SalBow8G0126 Salvia bowleyana HOM05D001584 ORTHO05D001472 8.8e-30 134.0 157 47.1
Peaxi162Scf00076g00024 Petunia axillaris HOM05D001584 ORTHO05D001472 2.6e-29 132.5 151 52.3
Gohir.D12G151500 Gossypium hirsutum HOM05D001584 ORTHO05D001472 3.3e-29 132.1 170 45.3
THA.LOC104805260 Tarenaya hassleriana HOM05D001584 ORTHO05D001472 3.3e-29 132.1 156 49.4
COL.COLO4_23604 Corchorus olitorius HOM05D001584 ORTHO05D001472 4.4e-29 131.7 105 61.0
HanXRQChr12g0372231 Helianthus annuus HOM05D001584 ORTHO05D001472 5.7e-29 131.3 139 51.8
Glyma.08G101200 Glycine max HOM05D001584 ORTHO05D001472 7.5e-29 131.0 119 63.0
AUR62005561 Chenopodium quinoa HOM05D001584 ORTHO05D001472 1.3e-28 130.2 137 51.8
SGA_v2.0_scaffold87G27121 Striga asiatica HOM05D001584 ORTHO05D001472 1.3e-28 130.2 152 49.3
Glyma.05G144800 Glycine max HOM05D001584 ORTHO05D001472 2.2e-28 129.4 119 62.2
Gorai.008G163000 Gossypium raimondii HOM05D001584 ORTHO05D001472 2.2e-28 129.4 170 45.3
DCAR_007021 Daucus carota HOM05D001584 ORTHO05D001472 2.8e-28 129.0 140 52.1
Oeu020317.2 Olea europaea HOM05D001584 ORTHO05D001472 3.7e-28 128.6 159 48.4
Thhalv10004262m.g Eutrema salsugineum HOM05D001584 ORTHO05D001472 4.8e-28 128.3 155 49.0
Sed0022572 Sechium edule HOM05D001584 ORTHO05D001472 4.8e-28 128.3 155 49.7
Peaxi162Scf00797g00008 Petunia axillaris HOM05D001584 ORTHO05D001472 6.3e-28 127.9 166 43.4
GSVIVG01010321001 Vitis vinifera HOM05D001584 ORTHO05D001472 5.3e-27 124.8 135 55.6
Oeu041693.1 Olea europaea HOM05D001584 ORTHO05D001472 7.0e-27 124.4 139 48.9
Sed0004627 Sechium edule HOM05D001584 ORTHO05D001472 9.1e-27 124.0 168 48.2
MSTRG.531 Avicennia marina HOM05D001584 ORTHO05D001472 1.2e-26 123.6 156 46.2
TAR374G0705 Trochodendron aralioides HOM05D001584 ORTHO05D001472 2.0e-26 122.9 153 49.0
MELO3C010722.2 Cucumis melo HOM05D001584 ORTHO05D001472 3.5e-26 122.1 149 49.0
AUR62024174 Chenopodium quinoa HOM05D001584 ORTHO05D001472 4.5e-26 121.7 113 56.6
Dinv33382 Davidia involucrata HOM05D000918 ORTHO05D000791 7.7e-26 120.9 151 46.4
Sed0005139 Sechium edule HOM05D001584 ORTHO05D001472 7.7e-26 120.9 159 44.7
Sopen04g011180 Solanum pennellii HOM05D001584 ORTHO05D001472 7.7e-26 120.9 109 55.0
TAR374G0591 Trochodendron aralioides HOM05D001584 ORTHO05D001472 7.7e-26 120.9 153 48.4
TAR371G0399 Trochodendron aralioides HOM05D001584 ORTHO05D001472 1.3e-25 120.2 139 49.6
ECA246G0816 Erigeron canadensis HOM05D001584 ORTHO05D001472 2.9e-25 119.0 155 46.5
CsaV3_2G025270 Cucumis sativus L. HOM05D001584 ORTHO05D001472 3.8e-25 118.6 152 46.7
Aa31LG2G6330 Aethionema arabicum HOM05D001584 ORTHO05D001472 3.2e-24 115.5 143 45.5
Sp2g15220 Schrenkiella parvula HOM05D001584 ORTHO05D001472 3.2e-24 115.5 137 49.6
ECA233G6254 Erigeron canadensis HOM05D001584 ORTHO05D001472 7.2e-24 114.4 143 51.7
BcaC04g21406 Brassica carinata HOM05D001584 ORTHO05D001472 9.4e-24 114.0 123 52.0
C09p32180 Brassica napus HOM05D001584 ORTHO05D001472 9.4e-24 114.0 123 52.0
BolC9t56065H Brassica oleracea HOM05D001584 ORTHO05D001472 9.4e-24 114.0 123 52.0
A09p25120 Brassica napus HOM05D001584 ORTHO05D001472 4.7e-23 111.7 112 57.1
MSTRG.7968 Avicennia marina HOM05D001584 ORTHO05D001472 6.1e-23 111.3 156 42.3
BraA09t38099Z Brassica rapa HOM05D001584 ORTHO05D001472 6.1e-23 111.3 112 56.2
arahy.Tifrunner.gnm1.ann1.0N1I6I Arachis hypogaea HOM05D001584 ORTHO05D001472 2.3e-22 109.4 144 45.1
arahy.Tifrunner.gnm1.ann1.6BE69P Arachis hypogaea HOM05D001584 ORTHO05D001472 2.3e-22 109.4 144 45.1
BcaC06g31099 Brassica carinata HOM05D001584 ORTHO05D001472 2.3e-22 109.4 137 49.6
Hund25433 Selenicereus undatus HOM05D001584 ORTHO05D001472 4.0e-22 108.6 163 44.8
C07p35020 Brassica napus HOM05D001584 ORTHO05D001472 8.8e-22 107.5 147 46.3
CSS0000820 Camellia sinensis var. sinensis HOM05D001584 ORTHO05D004598 1.2e-21 107.1 140 43.6
CSS0015034 Camellia sinensis var. sinensis HOM05D001584 ORTHO05D004598 1.2e-21 107.1 140 43.6
BcaC06g33933 Brassica carinata HOM05D001584 ORTHO05D001472 2.6e-21 105.9 147 46.3
BolC7t44034H Brassica oleracea HOM05D001584 ORTHO05D001472 2.6e-21 105.9 147 46.3
Migut.E00234 Erythranthe guttata HOM05D001584 ORTHO05D001472 3.4e-21 105.5 156 40.4
Lj4g0011895 Lotus japonicus HOM05D001584 ORTHO05D001472 4.4e-21 105.1 81 63.0
Dinv25692 Davidia involucrata HOM05D000918 ORTHO05D000791 5.7e-21 104.8 147 40.1
A06p42300 Brassica napus HOM05D001584 ORTHO05D001472 7.5e-21 104.4 136 47.8
CARHR146990 Cardamine hirsuta HOM05D001584 ORTHO05D001472 9.8e-21 104.0 118 50.8
BraA06t27146Z Brassica rapa HOM05D001584 ORTHO05D001472 1.3e-20 103.6 129 49.6
unitig_699.g19947 Utricularia gibba HOM05D000557 ORTHO05D001472 1.3e-20 103.6 137 45.3
BcaC03g17310 Brassica carinata HOM05D001584 ORTHO05D001472 3.7e-20 102.1 77 61.0
C02p52590 Brassica napus HOM05D001584 ORTHO05D001472 3.7e-20 102.1 77 61.0
BolC2t11334H Brassica oleracea HOM05D001584 ORTHO05D001472 3.7e-20 102.1 77 61.0
A02p34240 Brassica napus HOM05D001584 ORTHO05D001472 2.4e-19 99.4 112 49.1
EL10Ac6g13422 Beta vulgaris HOM05D001584 ORTHO05D001472 3.1e-19 99.0 133 42.9
BraA02t08438Z Brassica rapa HOM05D001584 ORTHO05D001472 3.1e-19 99.0 112 49.1
HanXRQChr04g0106951 Helianthus annuus HOM05D001584 ORTHO05D001472 4.1e-19 98.6 91 54.9
AL5G14660 Arabidopsis lyrata HOM05D001584 ORTHO05D001472 7.0e-19 97.8 116 52.6
unitig_747.g21136 Utricularia gibba HOM05D001584 ORTHO05D001472 7.0e-19 97.8 145 38.6
AT3G26000 Arabidopsis thaliana HOM05D001584 ORTHO05D001472 9.1e-19 97.4 124 50.8
BcaB07g30243 Brassica carinata HOM05D001584 ORTHO05D001472 2.0e-18 96.3 84 54.8
Carub.0005s0385 Capsella rubella HOM05D001584 ORTHO05D001472 2.7e-18 95.9 123 49.6
SHI17924 Sapria himalayana HOM05D001584 ORTHO05D001472 4.5e-18 95.1 135 38.5
Actinidia36168 Actinidia chinensis HOM05D001584 ORTHO05D001472 5.9e-18 94.7 85 55.3
Actinidia05942 Actinidia chinensis HOM05D001584 ORTHO05D001472 8.6e-17 90.9 85 52.9
Migut.K00685 Erythranthe guttata HOM05D001584 ORTHO05D001472 8.6e-17 90.9 157 40.1
MBI11_g02882_MAGBIO Magnolia biondii HOM05D001584 ORTHO05D001472 1.1e-16 90.5 163 38.0
RcHm_v2.0_Chr2g0174321 Rosa chinensis HOM05D001584 ORTHO05D001472 3.3e-16 89.0 159 39.0
RcHm_v2.0_Chr2g0174221 Rosa chinensis HOM05D001584 ORTHO05D001472 7.2e-16 87.8 159 39.0
Aqoxy5G03553 Aquilegia oxysepala HOM05D001584 ORTHO05D001472 9.5e-16 87.4 176 34.1
Eucgr.H04679 Eucalyptus grandis HOM05D001584 ORTHO05D001472 2.1e-15 86.3 68 60.3
GSVIVG01001846001 Vitis vinifera HOM05D001584 ORTHO05D001472 2.8e-15 85.9 106 44.3
FvH4_6g52710 Fragaria vesca HOM05D001584 ORTHO05D001472 4.7e-15 85.1 154 38.3
FAN05G3308 Fragaria x ananassa HOM05D001584 ORTHO05D001472 4.7e-15 85.1 154 38.3
FAN14G2241 Fragaria x ananassa HOM05D001584 ORTHO05D001472 4.7e-15 85.1 154 38.3
Lalb_Chr13g0294101 Lupinus albus HOM05D001584 ORTHO05D001472 6.1e-15 84.7 139 45.3
FAN09G0004 Fragaria x ananassa HOM05D001584 ORTHO05D001472 8.0e-15 84.3 154 38.3
Lalb_Chr12g0206391 Lupinus albus HOM05D001584 ORTHO05D001472 4.0e-14 82.0 133 44.4
FAN02G0627 Fragaria x ananassa HOM05D001584 ORTHO05D001472 5.2e-14 81.6 154 37.0
Lsat_1_v5_gn_7_83581 Lactuca sativa HOM05D001584 ORTHO05D001472 6.8e-14 81.3 102 51.0
MD17G1017800 Malus domestica HOM05D001584 ORTHO05D001472 6.8e-14 81.3 165 35.2
MD09G1017100 Malus domestica HOM05D001584 ORTHO05D001472 7.5e-13 77.8 97 44.3
Lalb_Chr07g0187261 Lupinus albus HOM05D001584 ORTHO05D001472 1.3e-12 77.0 131 42.7
Rhsim08G0046100 Rhododendron simsii HOM05D001584 ORTHO05D001472 6.3e-12 74.7 152 34.9
Cc07_g00430 Coffea canephora HOM05D001584 ORTHO05D001472 1.8e-11 73.2 95 41.1
CiPaw.03G050700 Carya illinoinensis HOM05D001584 ORTHO05D001472 2.4e-11 72.8 105 39.0
Atru.chr6.2489 Acer truncatum HOM05D001584 ORTHO05D001472 4.1e-11 72.0 90 38.9
Prupe.3G300300 Prunus persica HOM05D001584 ORTHO05D001472 4.1e-11 72.0 83 47.0
HanXRQChr10g0303101 Helianthus annuus HOM05D001584 ORTHO05D001472 9.2e-11 70.9 58 58.6
Gohir.D04G079600 Gossypium hirsutum HOM05D001584 ORTHO05D001472 1.6e-10 70.1 88 44.3
Gorai.012G089600 Gossypium raimondii HOM05D001584 ORTHO05D001472 1.6e-10 70.1 88 44.3
Nitab4.5_0001863g0050 Nicotiana tabacum HOM05D001584 ORTHO05D001472 4.5e-10 68.6 88 44.3
Thecc.04G027800 Theobroma cacao HOM05D001584 ORTHO05D001472 5.9e-10 68.2 98 38.8
Duzib264G0611 Durio zibethinus HOM05D001584 ORTHO05D001472 1.3e-09 67.0 84 45.2
Gohir.A05G341500 Gossypium hirsutum HOM05D001584 ORTHO05D001472 1.7e-09 66.6 88 42.0
Duzib187G1056 Durio zibethinus HOM05D001584 ORTHO05D001472 3.8e-09 65.5 87 42.5
CiPaw.04G033300 Carya illinoinensis HOM05D001584 ORTHO05D001472 6.6e-09 64.7 97 41.2
Haze_14817 Corylus avellana HOM05D001584 ORTHO05D001472 1.1e-08 63.9 77 42.9
QL02p072816 Quercus lobata HOM05D001584 ORTHO05D001472 1.5e-08 63.5 93 38.7
Cfa007272 Carpinus fangiana HOM05D003882 ORTHO05D004598 1.9e-08 63.2 73 45.2
Oeu019171.1 Olea europaea HOM05D001584 ORTHO05D001472 1.9e-08 63.2 149 30.2
SGA_v2.0_scaffold135G34945 Striga asiatica HOM05D001584 ORTHO05D001472 2.5e-08 62.8 166 25.9
Lj7A606T77 Lonicera japonica HOM05D001584 ORTHO05D001472 4.7e-07 58.5 61 54.1
Peaxi162Scf00420g00334 Petunia axillaris HOM05D001584 ORTHO05D001472 6.1e-07 58.2 81 40.7
MSTRG.24070 Avicennia marina HOM05D001584 ORTHO05D001472 1.4e-06 57.0 140 27.1
Cfa007274 Carpinus fangiana HOM05D001584 ORTHO05D001472 1.4e-06 57.0 73 42.5
Nitab4.5_0000040g0470 Nicotiana tabacum HOM05D001584 ORTHO05D001472 2.3e-06 56.2 102 35.3
PSO782G5085 Papaver somniferum HOM05D001584 ORTHO05D001472 2.3e-06 56.2 107 38.3
Cpa.g.sc3632.1 Carica papaya HOM05D001584 ORTHO05D001472 5.2e-06 55.1 50 46.0


User provided reference genes

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