Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv10949 Davidia involucrata HOM05D004124 ORTHO05D004779 1.8e-199 699.1 375 100.0
GSVIVG01010495001 Vitis vinifera HOM05D004124 ORTHO05D004779 8.3e-128 461.1 283 91.2
CANSAT01G0376 Cannabis sativa HOM05D004124 ORTHO05D004779 2.0e-126 456.4 285 89.1
Haze_12426 Corylus avellana HOM05D004124 ORTHO05D004779 2.3e-125 453.0 283 88.7
Cc11_g16980 Coffea canephora HOM05D004124 ORTHO05D004779 5.0e-125 451.8 283 88.0
Potri.001G056000 Populus trichocarpa HOM05D004124 ORTHO05D004779 4.3e-124 448.7 285 88.8
Gohir.A04G140100 Gossypium hirsutum HOM05D004124 ORTHO05D004779 1.2e-123 447.2 285 87.4
Gorai.012G176300 Gossypium raimondii HOM05D004124 ORTHO05D004779 2.8e-123 446.0 285 87.4
COL.COLO4_20412 Corchorus olitorius HOM05D004124 ORTHO05D004779 3.6e-123 445.7 241 89.6
Duzib251G0523 Durio zibethinus HOM05D004124 ORTHO05D004779 8.0e-123 444.5 285 86.7
Manes.12G010400 Manihot esculenta HOM05D004124 ORTHO05D004779 1.1e-122 444.1 285 87.4
Atru.chr11.2334 Acer truncatum HOM05D004124 ORTHO05D004779 1.4e-122 443.7 284 88.0
Gohir.D04G183300 Gossypium hirsutum HOM05D004124 ORTHO05D004779 1.4e-122 443.7 287 87.1
Rhsim12G0025300 Rhododendron simsii HOM05D004124 ORTHO05D004779 1.4e-122 443.7 283 87.6
Phvul.001G262500 Phaseolus vulgaris HOM05D004124 ORTHO05D004779 6.8e-122 441.4 283 86.2
VMungo1383G0738 Vigna mungo HOM05D004124 ORTHO05D004779 1.2e-121 440.7 283 85.9
Glyma.18G005700 Glycine max HOM05D004124 ORTHO05D004779 1.5e-121 440.3 283 85.5
TWI18G0339 Tripterygium wilfordii HOM05D004124 ORTHO05D004779 4.4e-121 438.7 237 88.6
arahy.Tifrunner.gnm1.ann1.JS6392 Arachis hypogaea HOM05D004124 ORTHO05D004779 5.8e-121 438.3 285 85.3
Glyma.11G251300 Glycine max HOM05D004124 ORTHO05D004779 5.8e-121 438.3 283 85.2
Potri.003G172500 Populus trichocarpa HOM05D004124 ORTHO05D004779 1.3e-120 437.2 284 87.3
Sabra01G0040400 Salix brachista HOM05D004124 ORTHO05D004779 4.9e-120 435.3 285 86.7
CiPaw.06G103200 Carya illinoinensis HOM05D004124 ORTHO05D004779 8.3e-120 434.5 234 88.9
Eucgr.H04636 Eucalyptus grandis HOM05D004124 ORTHO05D004779 8.3e-120 434.5 284 84.5
Gorai.005G166600 Gossypium raimondii HOM05D004124 ORTHO05D004779 4.1e-119 432.2 284 84.9
RcHm_v2.0_Chr4g0430131 Rosa chinensis HOM05D004124 ORTHO05D004779 5.4e-119 431.8 285 84.6
arahy.Tifrunner.gnm1.ann1.B7Q2TL Arachis hypogaea HOM05D004124 ORTHO05D004779 2.1e-118 429.9 296 82.1
QL03p052498 Quercus lobata HOM05D004124 ORTHO05D004779 2.7e-118 429.5 285 84.9
FAN17G0270 Fragaria x ananassa HOM05D004124 ORTHO05D004779 4.6e-118 428.7 288 83.0
Gohir.A03G125700 Gossypium hirsutum HOM05D004124 ORTHO05D004779 1.0e-117 427.6 284 84.2
FAN07G1336 Fragaria x ananassa HOM05D004124 ORTHO05D004779 1.3e-117 427.2 288 82.6
Ciclev10033913m.g Citrus clementina HOM05D004124 ORTHO05D004779 1.7e-117 426.8 306 80.7
FAN22G1987 Fragaria x ananassa HOM05D004124 ORTHO05D004779 2.3e-117 426.4 288 83.0
FAN12G0357 Fragaria x ananassa HOM05D004124 ORTHO05D004779 3.0e-117 426.0 288 83.0
FvH4_4g23660 Fragaria vesca HOM05D004124 ORTHO05D004779 3.9e-117 425.6 285 83.5
MELO3C011859.2 Cucumis melo HOM05D004124 ORTHO05D004779 5.1e-117 425.2 285 84.2
CsaV3_5G030210 Cucumis sativus L. HOM05D004124 ORTHO05D004779 5.1e-117 425.2 285 84.2
Nn8g41237 Nelumbo nucifera HOM05D004124 ORTHO05D004779 5.1e-117 425.2 285 83.2
Nn5g26967 Nelumbo nucifera HOM05D004124 ORTHO05D004779 6.6e-117 424.9 284 84.5
Gohir.D02G148500 Gossypium hirsutum HOM05D004124 ORTHO05D004779 1.5e-116 423.7 286 83.9
PGR102G1761 Punica granatum HOM05D004124 ORTHO05D004779 1.9e-116 423.3 238 85.7
TAR626G1310 Trochodendron aralioides HOM05D004124 ORTHO05D004779 1.9e-116 423.3 285 83.9
Lj6g0002227 Lotus japonicus HOM05D004124 ORTHO05D004779 5.6e-116 421.8 285 83.5
Ca_16453_v3 Cicer arietinum L. HOM05D004124 ORTHO05D004779 1.2e-115 420.6 285 82.8
Actinidia30642 Actinidia chinensis HOM05D004124 ORTHO05D004779 1.4e-114 417.2 283 83.4
Prupe.1G225000 Prunus persica HOM05D004124 ORTHO05D004779 2.3e-114 416.4 221 89.6
Actinidia09646 Actinidia chinensis HOM05D004124 ORTHO05D004779 5.2e-114 415.2 229 85.2
Psat5g096680 Pisum sativum HOM05D004124 ORTHO05D004779 5.2e-114 415.2 286 82.2
Nitab4.5_0000861g0060 Nicotiana tabacum HOM05D004124 ORTHO05D004779 1.2e-113 414.1 296 79.7
PGSC0003DMG400034304 Solanum tuberosum HOM05D004124 ORTHO05D004779 3.4e-113 412.5 283 82.7
vmacro01057 Vaccinium macrocarpon HOM05D004124 ORTHO05D004779 3.4e-113 412.5 346 71.4
Lalb_Chr11g0075781 Lupinus albus HOM05D004124 ORTHO05D004779 4.4e-113 412.1 239 79.9
TAR383G0859 Trochodendron aralioides HOM05D004124 ORTHO05D004779 4.4e-113 412.1 283 82.3
Sopen05g010890 Solanum pennellii HOM05D004124 ORTHO05D004779 5.8e-113 411.8 283 82.7
MD16G1120200 Malus domestica HOM05D004124 ORTHO05D004779 1.3e-112 410.6 239 84.1
Medtr3g085190 Medicago truncatula HOM05D004124 ORTHO05D004779 2.2e-112 409.8 284 79.6
MBI13_g33572_MAGBIO Magnolia biondii HOM05D004124 ORTHO05D004779 2.9e-112 409.5 287 80.8
AUR62005628 Chenopodium quinoa HOM05D004124 ORTHO05D004779 4.9e-112 408.7 287 82.9
MSTRG.8009 Avicennia marina HOM05D004124 ORTHO05D004779 8.3e-112 407.9 284 82.0
Solyc05g015500.4 Solanum lycopersicum HOM05D004124 ORTHO05D004779 2.4e-111 406.4 281 82.2
CAN.G163.7 Capsicum annuum HOM05D004124 ORTHO05D004779 4.1e-111 405.6 283 82.7
Sabra03G0126200 Salix brachista HOM05D004124 ORTHO05D004779 7.1e-111 404.8 266 86.1
AUR62028920 Chenopodium quinoa HOM05D004124 ORTHO05D004779 1.2e-110 404.1 287 82.6
Actinidia08066 Actinidia chinensis HOM05D004124 ORTHO05D004779 2.7e-110 402.9 318 74.8
Peaxi162Scf00128g01335 Petunia axillaris HOM05D004124 ORTHO05D004779 2.7e-110 402.9 236 82.2
EL10Ac6g13513 Beta vulgaris HOM05D004124 ORTHO05D004779 1.0e-109 401.0 286 80.8
Duzib248G0967 Durio zibethinus HOM05D004124 ORTHO05D004779 1.0e-109 401.0 285 81.8
MSTRG.500 Avicennia marina HOM05D004124 ORTHO05D004779 1.3e-109 400.6 241 80.1
Sed0002251 Sechium edule HOM05D004124 ORTHO05D004779 6.6e-109 398.3 284 81.7
DCAR_024098 Daucus carota HOM05D004124 ORTHO05D004779 8.6e-109 397.9 286 79.0
Migut.K00950 Erythranthe guttata HOM05D004124 ORTHO05D004779 1.5e-108 397.1 285 81.1
Thhalv10018870m.g Eutrema salsugineum HOM05D004124 ORTHO05D004779 4.7e-107 392.1 244 78.7
PSO063G2768 Papaver somniferum HOM05D004124 ORTHO05D004779 6.8e-106 388.3 290 78.3
Aa31sc584G20 Aethionema arabicum HOM05D004124 ORTHO05D004779 8.9e-106 387.9 286 78.3
Carub.0002s1361 Capsella rubella HOM05D004124 ORTHO05D004779 1.2e-105 387.5 242 77.7
TPR.G17791 Trifolium pratense HOM05D004124 ORTHO05D004779 1.5e-105 387.1 231 81.4
PSO170G5699 Papaver somniferum HOM05D004124 ORTHO05D004779 2.0e-105 386.7 290 77.9
Hund06093 Selenicereus undatus HOM05D004124 ORTHO05D004779 2.6e-105 386.3 287 79.4
Lj6A827G48 Lonicera japonica HOM05D004124 ORTHO05D004779 2.9e-104 382.9 208 87.0
AL2G25860 Arabidopsis lyrata HOM05D004124 ORTHO05D004779 3.8e-104 382.5 243 77.4
Sp5g22270 Schrenkiella parvula HOM05D004124 ORTHO05D004779 3.8e-104 382.5 290 78.3
Lalb_Chr08g0230601 Lupinus albus HOM05D004124 ORTHO05D004779 4.9e-104 382.1 284 77.5
AT1G67325 Arabidopsis thaliana HOM05D004124 ORTHO05D004779 1.9e-103 380.2 243 77.0
Thecc.02G206600 Theobroma cacao HOM05D004124 ORTHO05D004779 1.9e-103 380.2 210 88.6
CARHR059820 Cardamine hirsuta HOM05D004124 ORTHO05D004779 5.4e-103 378.6 240 77.5
THA.LOC104825500 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 5.4e-103 378.6 240 77.5
SGA_v2.0_scaffold391G50628 Striga asiatica HOM05D004124 ORTHO05D004779 7.1e-103 378.3 285 76.8
THA.LOC104807133 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 7.1e-103 378.3 287 77.0
THA.LOC104807526 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 9.3e-103 377.9 241 75.9
Lalb_Chr13g0294351 Lupinus albus HOM05D004124 ORTHO05D004779 2.7e-102 376.3 285 75.1
Hund25468 Selenicereus undatus HOM05D004124 ORTHO05D004779 4.6e-102 375.6 260 73.8
ECA233G0726 Erigeron canadensis HOM05D004124 ORTHO05D004779 1.7e-101 373.6 283 77.7
Lalb_Chr07g0187111 Lupinus albus HOM05D004124 ORTHO05D004779 2.3e-101 373.2 285 75.1
Lj3A1069T45 Lonicera japonica HOM05D004124 ORTHO05D004779 1.5e-100 370.5 268 82.1
ECA234G0541 Erigeron canadensis HOM05D004124 ORTHO05D004779 2.1e-99 366.7 232 74.6
Manes.13G011200 Manihot esculenta HOM05D004124 ORTHO05D004779 8.1e-99 364.8 285 75.4
Aqoxy7G02609 Aquilegia oxysepala HOM05D004124 ORTHO05D004779 1.5e-97 360.5 295 74.9
DCAR_026459 Daucus carota HOM05D004124 ORTHO05D004779 4.4e-97 359.0 223 76.2
BcaB03g15346 Brassica carinata HOM05D004124 ORTHO05D004779 9.9e-97 357.8 245 73.5
ATR0626G238 Amborella trichopoda HOM05D004124 ORTHO05D004779 6.4e-96 355.1 287 72.8
HanXRQChr17g0569011 Helianthus annuus HOM05D004124 ORTHO05D004779 8.4e-96 354.8 237 73.4
CSS0020706 Camellia sinensis var. sinensis HOM05D004124 ORTHO05D004779 4.2e-95 352.4 227 88.5
HanXRQChr12g0372641 Helianthus annuus HOM05D004124 ORTHO05D004779 3.0e-93 346.3 282 72.3
C06p38790 Brassica napus HOM05D004124 ORTHO05D004779 4.3e-92 342.4 246 71.5
CiPaw.05G108900 Carya illinoinensis HOM05D004124 ORTHO05D004779 3.6e-91 339.3 242 83.5
Sed0008103 Sechium edule HOM05D004124 ORTHO05D004779 4.8e-91 339.0 232 73.3
BolC6t38971H Brassica oleracea HOM05D004124 ORTHO05D004779 1.1e-90 337.8 245 71.0
CSS0002767 Camellia sinensis var. sinensis HOM05D004124 ORTHO05D004779 1.8e-90 337.0 196 84.2
Sc04g0010190 Simmondsia chinensis HOM05D004124 ORTHO05D004779 2.4e-90 336.7 285 73.0
Eucgr.B03499 Eucalyptus grandis HOM05D004124 ORTHO05D004779 9.0e-90 334.7 283 71.0
A07p33920 Brassica napus HOM05D000660 ORTHO05D000766 4.5e-89 332.4 248 70.6
C06p42940 Brassica napus HOM05D004124 ORTHO05D004779 5.8e-89 332.0 245 70.6
HanXRQChr12g0361221 Helianthus annuus HOM05D004124 ORTHO05D004779 7.6e-89 331.6 238 70.2
Duzib268G1736 Durio zibethinus HOM05D004124 ORTHO05D004779 9.9e-89 331.3 230 84.8
BraA07t30886Z Brassica rapa HOM05D004124 ORTHO05D004779 1.3e-88 330.9 249 69.9
A07p32620 Brassica napus HOM05D004124 ORTHO05D004779 1.4e-87 327.4 247 69.6
BolC6t39143H Brassica oleracea HOM05D004124 ORTHO05D004779 2.1e-86 323.6 244 69.7
BraA07t31018Z Brassica rapa HOM05D000660 ORTHO05D000766 2.7e-86 323.2 245 69.8
Lsat_1_v5_gn_4_400 Lactuca sativa HOM05D004124 ORTHO05D004779 4.6e-86 322.4 248 70.6
Ah.03g136110 Amaranthus hybridus HOM05D004124 ORTHO05D004779 1.5e-84 317.4 229 69.0
unitig_749.g13306 Utricularia gibba HOM05D004124 ORTHO05D004779 9.6e-84 314.7 284 68.3
ClCG11G013590 Citrullus lanatus HOM05D004124 ORTHO05D004779 1.3e-80 304.3 284 67.6
Nitab4.5_0003900g0010 Nicotiana tabacum HOM05D004124 ORTHO05D004779 1.3e-77 294.3 227 77.1
Oeu006524.1 Olea europaea HOM05D004124 ORTHO05D004779 6.7e-77 292.0 198 74.2
Oeu049141.1 Olea europaea HOM05D004124 ORTHO05D004779 2.8e-75 286.6 216 69.0
Zm00001eb174550 Zea mays HOM05D004124 ORTHO05D004779 3.1e-74 283.1 245 62.0
Lsat_1_v5_gn_8_147801 Lactuca sativa HOM05D004124 ORTHO05D004779 3.4e-73 279.6 243 63.4
CDE04G3109 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 1.1e-68 264.6 239 61.9
HPP92_015269 Vanilla planifolia HOM05D004124 ORTHO05D004779 2.2e-67 260.4 200 65.0
Zm00001eb035500 Zea mays HOM05D004124 ORTHO05D004779 1.4e-66 257.7 245 57.6
Os08g0521400 Oryza sativa ssp. japonica HOM05D004124 ORTHO05D004779 2.2e-59 233.8 247 54.3
Lsat_1_v5_gn_5_94821 Lactuca sativa HOM05D004124 ORTHO05D004779 3.8e-48 196.4 246 61.0
Cpa.g.sc43.62 Carica papaya HOM05D004124 ORTHO05D004779 1.0e-45 188.3 154 63.0
HanXRQChr08g0221261 Helianthus annuus HOM05D004124 ORTHO05D004779 1.1e-42 178.3 131 70.2
AagrBONN_evm.TU.Sc2ySwM_340.309 Anthoceros agrestis HOM05D004124 ORTHO05D004779 3.6e-38 163.3 249 41.0
Pp3c4_8110 Physcomitrium patens HOM05D004124 ORTHO05D004779 2.7e-33 147.1 247 40.1
SMO200G0023 Selaginella moellendorffii HOM05D004124 ORTHO05D004779 2.2e-32 144.1 238 39.9
Mapoly0005s0267 Marchantia polymorpha HOM05D004124 ORTHO05D004779 1.5e-31 141.4 251 37.1
PGR083G0898 Punica granatum HOM05D004124 ORTHO05D004779 4.4e-28 129.8 183 47.0
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 1.6e-25 121.3 228 38.2
CiPaw.14G021000 Carya illinoinensis HOM05D004124 ORTHO05D004779 2.7e-25 120.6 232 35.3
Nn1g00866 Nelumbo nucifera HOM05D004124 ORTHO05D004779 3.5e-25 120.2 235 37.9
TAR374G0532 Trochodendron aralioides HOM05D004124 ORTHO05D004779 5.9e-25 119.4 225 36.9
arahy.Tifrunner.gnm1.ann1.FNBZ5S Arachis hypogaea HOM05D004124 ORTHO05D004779 1.3e-24 118.2 222 39.2
Glyma.18G252600 Glycine max HOM05D004124 ORTHO05D004779 3.8e-24 116.7 236 34.3
BcaNung07398 Brassica carinata HOM05D004124 ORTHO05D004779 6.6e-24 115.9 53 100.0
Aqoxy3G02746 Aquilegia oxysepala HOM05D004124 ORTHO05D004779 8.6e-24 115.5 225 36.0
PSO782G3756 Papaver somniferum HOM05D004124 ORTHO05D004779 2.1e-22 110.9 232 37.1
TAR375G0412 Trochodendron aralioides HOM05D004124 ORTHO05D004779 2.8e-22 110.5 226 37.2
Lj3g0004507 Lotus japonicus HOM05D004124 ORTHO05D004779 3.6e-22 110.2 225 36.4
arahy.Tifrunner.gnm1.ann1.4H3LGZ Arachis hypogaea HOM05D004124 ORTHO05D004779 2.3e-21 107.5 234 36.8
CBR_g53713 Chara braunii HOM05D004124 ORTHO05D004779 4.0e-21 106.7 255 34.5
Phvul.008G046200 Phaseolus vulgaris HOM05D004124 ORTHO05D004779 1.5e-20 104.8 225 34.2
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 2.6e-20 104.0 252 32.1
CDE06G1866 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 2.9e-19 100.5 246 32.1
Ca_14066_v3 Cicer arietinum L. HOM05D004124 ORTHO05D004779 4.9e-19 99.8 235 32.8
CDE06G1514 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 7.0e-18 95.9 209 34.0
PGR083G1960 Punica granatum HOM05D000500 ORTHO05D000367 1.2e-17 95.1 56 76.8
AagrBONN_evm.TU.Sc2ySwM_368.334 Anthoceros agrestis HOM05D004124 ORTHO05D004779 2.3e-16 90.9 203 34.0
HanXRQChr12g0379451 Helianthus annuus HOM05D004124 ORTHO05D004779 2.9e-16 90.5 52 76.9
Actinidia20714 Actinidia chinensis HOM05D004124 ORTHO05D004779 6.6e-16 89.4 46 87.0
Os07g0490600 Oryza sativa ssp. japonica HOM05D004124 ORTHO05D004779 7.3e-15 85.9 251 32.3
Eucgr.L03169 Eucalyptus grandis HOM05D004124 ORTHO05D004779 9.5e-15 85.5 103 50.5
Glyma.09G242400 Glycine max HOM05D004124 ORTHO05D004779 4.7e-14 83.2 167 35.3
Zm00001eb105300 Zea mays HOM05D004124 ORTHO05D004779 5.2e-13 79.7 244 29.9
QL04p030567 Quercus lobata HOM05D004124 ORTHO05D004779 2.0e-12 77.8 155 35.5
CANSAT21G0875 Cannabis sativa HOM05D004124 ORTHO05D004779 1.9e-10 71.2 151 35.1
PSO063G6881 Papaver somniferum HOM05D004124 ORTHO05D004779 4.1e-10 70.1 165 34.5
Psat7g021520 Pisum sativum HOM05D004124 ORTHO05D004779 1.6e-09 68.2 250 26.8
QL04p030562 Quercus lobata HOM05D004124 ORTHO05D000004 3.9e-08 63.5 51 52.9
ATR0057G076 Amborella trichopoda HOM05D004124 ORTHO05D004779 5.0e-08 63.2 51 51.0
Haze_02835 Corylus avellana HOM05D004124 ORTHO05D004779 1.5e-07 61.6 48 54.2
SMO181G0003 Selaginella moellendorffii HOM05D004124 ORTHO05D004779 2.5e-07 60.8 30 76.7
Zm00001eb321720 Zea mays HOM05D004124 ORTHO05D004779 2.1e-06 57.8 58 44.8
GSVIVG01018266001 Vitis vinifera HOM05D004124 ORTHO05D004779 4.7e-06 56.6 51 49.0


User provided reference genes

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