Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv10935 Davidia involucrata HOM05D001937 ORTHO05D007024 1.8e-306 1055.0 523 100.0
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 1.4e-279 965.7 572 84.3
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 2.5e-279 964.9 572 83.9
Dinv02213 Davidia involucrata HOM05D001937 ORTHO05D007024 1.4e-277 959.1 545 88.4
Atru.chr12.1853 Acer truncatum HOM05D001937 ORTHO05D007024 9.7e-276 953.0 570 83.2
Manes.11G123000 Manihot esculenta HOM05D001937 ORTHO05D007024 1.7e-275 952.2 570 82.5
Prupe.2G098100 Prunus persica HOM05D001937 ORTHO05D007024 3.7e-275 951.0 570 82.6
QL11p024047 Quercus lobata HOM05D001937 ORTHO05D007024 8.2e-275 949.9 570 82.1
Ciclev10018533m.g Citrus clementina HOM05D001937 ORTHO05D007024 1.1e-274 949.5 572 82.7
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla HOM05D001937 ORTHO05D007024 2.4e-274 948.3 572 83.0
Gorai.005G213100 Gossypium raimondii HOM05D001937 ORTHO05D007024 3.1e-274 948.0 571 82.3
FvH4_7g07120 Fragaria vesca HOM05D001937 ORTHO05D007024 4.1e-274 947.6 570 82.6
MD07G1077100 Malus domestica HOM05D001937 ORTHO05D007024 4.1e-274 947.6 570 82.5
Potri.004G091000 Populus trichocarpa HOM05D001937 ORTHO05D007024 9.1e-274 946.4 570 82.6
FAN03G1993 Fragaria x ananassa HOM05D001937 ORTHO05D007024 1.6e-273 945.7 570 82.5
CiPaw.10G131100 Carya illinoinensis HOM05D001937 ORTHO05D007024 2.0e-273 945.3 572 82.2
Lj1P823T23 Lonicera japonica HOM05D001937 ORTHO05D007024 2.0e-273 945.3 573 83.1
CSS0034620 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 3.5e-273 944.5 572 82.7
FAN06G4695 Fragaria x ananassa HOM05D001937 ORTHO05D007024 4.5e-273 944.1 570 82.5
Sabra04G0061200 Salix brachista HOM05D001937 ORTHO05D007024 1.0e-272 943.0 570 82.1
CSS0040995 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 1.3e-272 942.6 572 82.5
FAN01G0178 Fragaria x ananassa HOM05D001937 ORTHO05D007024 2.2e-272 941.8 570 82.5
Gohir.D02G190400 Gossypium hirsutum HOM05D001937 ORTHO05D007024 5.0e-272 940.6 571 81.6
Gohir.A03G167300 Gossypium hirsutum HOM05D001937 ORTHO05D007024 6.5e-272 940.3 571 81.8
COL.COLO4_33143 Corchorus olitorius HOM05D001937 ORTHO05D007024 1.1e-271 939.5 570 82.1
RcHm_v2.0_Chr1g0337071 Rosa chinensis HOM05D001937 ORTHO05D007024 1.1e-271 939.5 570 82.1
Duzib132G1189 Durio zibethinus HOM05D001937 ORTHO05D007024 2.5e-271 938.3 570 81.6
Cpa.g.sc41.77 Carica papaya HOM05D001937 ORTHO05D007024 4.2e-271 937.6 572 81.5
Thecc.02G153900 Theobroma cacao HOM05D001937 ORTHO05D007024 4.2e-271 937.6 570 81.8
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 5.5e-271 937.2 565 82.7
Rhsim09G0056700 Rhododendron simsii HOM05D001937 ORTHO05D007024 3.3e-268 927.9 566 81.6
MBI05_g10862_MAGBIO Magnolia biondii HOM05D001937 ORTHO05D007024 1.3e-267 926.0 576 80.2
Aqoxy4G02972 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 4.8e-267 924.1 571 80.6
Eucgr.I01066 Eucalyptus grandis HOM05D001937 ORTHO05D007024 4.8e-267 924.1 569 80.7
Peaxi162Scf00165g01826 Petunia axillaris HOM05D001937 ORTHO05D007024 4.8e-267 924.1 572 80.1
TWI12G0886 Tripterygium wilfordii HOM05D001937 ORTHO05D007024 4.1e-266 921.0 570 80.5
CsaV3_6G000030 Cucumis sativus L. HOM05D001937 ORTHO05D007024 5.3e-266 920.6 567 80.4
Aqoxy2G01413 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 9.1e-266 919.8 571 80.2
Nitab4.5_0000761g0030 Nicotiana tabacum HOM05D001937 ORTHO05D007024 9.1e-266 919.8 570 80.4
CANSAT01G0692 Cannabis sativa HOM05D001937 ORTHO05D007024 2.0e-265 918.7 571 80.4
Duzib248G1173 Durio zibethinus HOM05D001937 ORTHO05D007024 2.0e-265 918.7 570 79.6
DCAR_003140 Daucus carota HOM05D001937 ORTHO05D007024 4.5e-265 917.5 572 80.9
SalBow1G8218 Salvia bowleyana HOM05D001937 ORTHO05D007024 5.9e-265 917.1 570 79.8
CAN.G97.40 Capsicum annuum HOM05D001937 ORTHO05D007024 7.7e-265 916.8 575 79.7
Sopen09g005280 Solanum pennellii HOM05D001937 ORTHO05D007024 1.0e-264 916.4 572 79.4
AL7G46730 Arabidopsis lyrata HOM05D001937 ORTHO05D007024 1.3e-264 916.0 570 79.6
AUR62008924 Chenopodium quinoa HOM05D001937 ORTHO05D007024 1.3e-264 916.0 570 79.6
Solyc09g010560.3 Solanum lycopersicum HOM05D001937 ORTHO05D007024 2.2e-264 915.2 572 79.2
Lj4g0006057 Lotus japonicus HOM05D001937 ORTHO05D007024 2.9e-264 914.8 570 80.2
PSO017G7212 Papaver somniferum HOM05D001937 ORTHO05D007024 3.8e-264 914.4 571 79.7
PSO478G1455 Papaver somniferum HOM05D001937 ORTHO05D007024 5.0e-264 914.1 571 79.5
Sp7g04200 Schrenkiella parvula HOM05D001937 ORTHO05D007024 5.0e-264 914.1 570 79.1
THA.LOC104823845 Tarenaya hassleriana HOM05D001937 ORTHO05D007024 5.0e-264 914.1 570 80.2
Aa31LG9G17330 Aethionema arabicum HOM05D001937 ORTHO05D007024 6.5e-264 913.7 570 79.3
CARHR214920 Cardamine hirsuta HOM05D001937 ORTHO05D007024 6.5e-264 913.7 570 79.5
MELO3C021250.2 Cucumis melo HOM05D001937 ORTHO05D007024 6.5e-264 913.7 567 79.7
Nitab4.5_0004091g0060 Nicotiana tabacum HOM05D001937 ORTHO05D007024 6.5e-264 913.7 570 80.0
Carub.0007s3301 Capsella rubella HOM05D001937 ORTHO05D007024 8.5e-264 913.3 570 79.3
Cc09_g08410 Coffea canephora HOM05D001937 ORTHO05D007024 1.1e-263 912.9 572 80.1
Oeu029564.1 Olea europaea HOM05D001937 ORTHO05D007024 3.2e-263 911.4 570 79.1
BcaB02g08024 Brassica carinata HOM05D001937 ORTHO05D007024 5.5e-263 910.6 570 78.6
PGSC0003DMG400008847 Solanum tuberosum HOM05D001937 ORTHO05D007024 7.2e-263 910.2 572 79.0
EL10Ac7g17851 Beta vulgaris HOM05D001937 ORTHO05D007024 1.2e-262 909.4 570 79.3
AT5G37830 Arabidopsis thaliana HOM05D001937 ORTHO05D007024 1.6e-262 909.1 570 78.9
A07p19500 Brassica napus HOM05D001937 ORTHO05D007024 1.6e-262 909.1 570 78.4
BraA07t29656Z Brassica rapa HOM05D001937 ORTHO05D007024 1.6e-262 909.1 570 78.4
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 1.6e-262 909.1 570 79.1
Migut.N00430 Erythranthe guttata HOM05D001937 ORTHO05D007024 2.7e-262 908.3 571 79.5
HanXRQChr10g0312981 Helianthus annuus HOM05D001937 ORTHO05D007024 2.7e-262 908.3 572 79.4
BolC6t36984H Brassica oleracea HOM05D001937 ORTHO05D007024 3.6e-262 907.9 570 78.2
Thhalv10027622m.g Eutrema salsugineum HOM05D001937 ORTHO05D007024 1.0e-261 906.4 570 78.6
BcaC08g44352 Brassica carinata HOM05D001937 ORTHO05D007024 3.0e-261 904.8 570 78.1
C06p17940 Brassica napus HOM05D001937 ORTHO05D007024 3.0e-261 904.8 570 78.1
MSTRG.3701 Avicennia marina HOM05D001937 ORTHO05D007024 4.0e-261 904.4 570 79.1
Sc14g0006180 Simmondsia chinensis HOM05D001937 ORTHO05D007024 6.8e-261 903.7 570 79.3
Glyma.08G069400 Glycine max HOM05D001937 ORTHO05D007024 2.6e-260 901.7 570 78.4
TAR636G0878 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.3e-259 899.4 539 83.3
Ah.08g214380 Amaranthus hybridus HOM05D001937 ORTHO05D007024 2.2e-259 898.7 571 77.1
Actinidia06125 Actinidia chinensis HOM05D001937 ORTHO05D007024 2.8e-259 898.3 542 82.7
Sed0024188 Sechium edule HOM05D001937 ORTHO05D007024 8.3e-259 896.7 567 78.0
Medtr4g093870 Medicago truncatula HOM05D001937 ORTHO05D007024 5.4e-258 894.0 570 77.5
unitig_0.g658 Utricularia gibba HOM05D001937 ORTHO05D007024 5.9e-257 890.6 572 77.6
Lalb_Chr16g0382831 Lupinus albus HOM05D001937 ORTHO05D007024 7.7e-257 890.2 570 77.0
Ca_18373_v3 Cicer arietinum L. HOM05D001937 ORTHO05D007024 1.0e-256 889.8 570 76.8
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea HOM05D001937 ORTHO05D007024 1.7e-256 889.0 570 77.0
ClCG05G003000 Citrullus lanatus HOM05D001937 ORTHO05D007024 6.5e-256 887.1 550 80.2
Lsat_1_v5_gn_6_11080 Lactuca sativa HOM05D001937 ORTHO05D007024 6.5e-256 887.1 572 77.4
Phvul.002G211700 Phaseolus vulgaris HOM05D001937 ORTHO05D007024 1.9e-255 885.6 570 77.0
ECA233G4596 Erigeron canadensis HOM05D001937 ORTHO05D007024 7.2e-255 883.6 565 78.2
VMungo0251G0821 Vigna mungo HOM05D001937 ORTHO05D007024 3.6e-254 881.3 570 76.5
Os01g0966000 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D007024 1.8e-253 879.0 571 76.9
Zm00001eb021240 Zea mays HOM05D001937 ORTHO05D007024 5.2e-253 877.5 570 76.1
ATR0559G108 Amborella trichopoda HOM05D001937 ORTHO05D007024 2.6e-252 875.2 568 77.5
Nn2g12806 Nelumbo nucifera HOM05D001937 ORTHO05D007024 9.2e-250 866.7 549 78.3
PGR142G3997 Punica granatum HOM05D001937 ORTHO05D007024 1.6e-249 865.9 574 77.0
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea HOM05D001937 ORTHO05D007024 6.6e-248 860.5 571 73.9
CDE07G0097 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 6.6e-248 860.5 572 75.3
SHI12658 Sapria himalayana HOM05D001937 ORTHO05D007024 1.4e-242 842.8 569 72.9
SEGI_01532 Sequoiadendron giganteum HOM05D001937 ORTHO05D007024 2.4e-242 842.0 576 73.3
Actinidia11252 Actinidia chinensis HOM05D001937 ORTHO05D007024 3.2e-242 841.6 529 80.0
ATR0559G369 Amborella trichopoda HOM05D001937 ORTHO05D007024 1.6e-241 839.3 568 74.6
TPR.G2837 Trifolium pratense HOM05D001937 ORTHO05D007024 5.0e-240 834.3 570 74.0
Lalb_Chr05g0217681 Lupinus albus HOM05D001937 ORTHO05D007024 4.0e-237 824.7 570 72.8
Pp3c19_22940 Physcomitrium patens HOM05D001937 ORTHO05D007024 8.3e-235 817.0 580 71.7
Mapoly0035s0055 Marchantia polymorpha HOM05D001937 ORTHO05D007024 7.8e-233 810.4 578 71.1
SMO147G0274 Selaginella moellendorffii HOM05D001937 ORTHO05D007024 1.6e-230 802.7 577 70.9
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis HOM05D001937 ORTHO05D007024 1.3e-227 793.1 554 72.7
CDE04G1916 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 5.1e-208 728.0 572 65.4
Aqoxy2G01407 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 6.6e-208 727.6 464 79.3
MD02G1239500 Malus domestica HOM05D001937 ORTHO05D007024 1.5e-204 716.5 482 74.9
MCO14G182 Micromonas commoda HOM05D001937 ORTHO05D007024 1.3e-200 703.4 588 61.6
GSVIVG01034203001 Vitis vinifera HOM05D001937 ORTHO05D007024 1.6e-190 669.8 522 67.2
Cfa025426 Carpinus fangiana HOM05D001937 ORTHO05D007024 1.1e-170 604.0 604 53.8
Cre07.g325748 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D007024 5.9e-164 581.6 637 51.5
SGA_v2.0_scaffold14G07136 Striga asiatica HOM05D001937 ORTHO05D007024 7.7e-164 581.3 424 72.6
Psat7g100640 Pisum sativum HOM05D001937 ORTHO05D007024 4.8e-158 562.0 392 73.7
TAR636G2433 Trochodendron aralioides HOM05D001937 ORTHO05D007024 5.5e-138 495.4 356 73.6
Potri.017G124400 Populus trichocarpa HOM05D001937 ORTHO05D007024 8.3e-126 454.9 313 74.8
PRCOL_00004137 Prasinoderma coloniale HOM05D001937 ORTHO05D007024 3.2e-125 453.0 567 43.9
VMungo0251G0025 Vigna mungo HOM05D001937 ORTHO05D007024 6.2e-113 412.1 481 53.0
CBR_g26059 Chara braunii HOM05D001937 ORTHO05D007024 7.8e-108 395.2 359 59.1
Dinv02208 Davidia involucrata HOM05D001937 ORTHO05D007024 5.3e-56 223.0 114 98.2
TAR636G3286 Trochodendron aralioides HOM05D001937 ORTHO05D043971 1.4e-51 208.4 116 83.6
CBR_g39219 Chara braunii HOM05D001937 ORTHO05D043971 4.8e-33 146.7 99 67.7
HPP92_019822 Vanilla planifolia HOM05D001937 ORTHO05D007024 2.7e-23 114.4 129 55.0
CBR_g26054 Chara braunii HOM05D000019 ORTHO05D000002 2.0e-15 88.2 99 54.5


User provided reference genes

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