Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv10908 Davidia involucrata HOM05D007419 ORTHO05D009327 4.2e-81 304.7 157 100.0
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 2.5e-57 225.7 121 96.7
QL09p047694 Quercus lobata HOM05D007419 ORTHO05D009327 2.2e-37 159.5 120 70.0
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 3.7e-37 158.7 112 74.1
CSS0048092 Camellia sinensis var. sinensis HOM05D007419 ORTHO05D009327 8.2e-37 157.5 105 78.1
QL09p047847 Quercus lobata HOM05D007419 ORTHO05D009327 4.1e-36 155.2 120 68.3
Cfa003423 Carpinus fangiana HOM05D007419 ORTHO05D009327 1.2e-35 153.7 123 68.3
GSVIVG01015592001 Vitis vinifera HOM05D007419 ORTHO05D009327 1.0e-34 150.6 117 73.5
Haze_25509 Corylus avellana HOM05D007419 ORTHO05D009327 2.9e-34 149.1 123 66.7
Potri.018G126300 Populus trichocarpa HOM05D007419 ORTHO05D009327 1.1e-33 147.1 122 68.0
Actinidia21951 Actinidia chinensis HOM05D007419 ORTHO05D009327 1.9e-33 146.4 117 70.9
Aqoxy7G03635 Aquilegia oxysepala HOM05D007419 ORTHO05D009327 3.2e-33 145.6 133 60.2
Atru.chr7.1950 Acer truncatum HOM05D007419 ORTHO05D009327 2.1e-32 142.9 122 59.8
Sopen07g003800 Solanum pennellii HOM05D007419 ORTHO05D009327 3.6e-32 142.1 114 64.9
Nitab4.5_0002008g0040 Nicotiana tabacum HOM05D007419 ORTHO05D009327 1.0e-31 140.6 113 64.6
Sabra18G0107200 Salix brachista HOM05D007419 ORTHO05D009327 1.4e-31 140.2 119 67.2
Solyc07g007920.3 Solanum lycopersicum HOM05D007419 ORTHO05D009327 2.3e-31 139.4 113 64.6
PGSC0003DMG400030908 Solanum tuberosum HOM05D007419 ORTHO05D009327 2.3e-31 139.4 113 63.7
Nitab4.5_0003393g0060 Nicotiana tabacum HOM05D007419 ORTHO05D009327 8.8e-31 137.5 113 62.8
Duzib168G0167 Durio zibethinus HOM05D007419 ORTHO05D009327 1.2e-30 137.1 107 67.3
Peaxi162Scf00088g01333 Petunia axillaris HOM05D007419 ORTHO05D009327 2.6e-30 136.0 132 55.3
Nn8g39549 Nelumbo nucifera HOM05D007419 ORTHO05D009327 1.3e-29 133.7 133 56.4
COL.COLO4_35160 Corchorus olitorius HOM05D007419 ORTHO05D009327 1.7e-29 133.3 119 62.2
Prupe.7G248700 Prunus persica HOM05D007419 ORTHO05D009327 4.8e-29 131.7 116 61.2
MD15G1166600 Malus domestica HOM05D007419 ORTHO05D009327 8.2e-29 131.0 124 57.3
Cc06_g08060 Coffea canephora HOM05D007419 ORTHO05D009327 1.8e-28 129.8 112 66.1
arahy.Tifrunner.gnm1.ann1.SLI0XQ Arachis hypogaea HOM05D007419 ORTHO05D009327 1.6e-27 126.7 119 61.3
AUR62013308 Chenopodium quinoa HOM05D007419 ORTHO05D009327 1.6e-27 126.7 123 60.2
Thecc.09G132300 Theobroma cacao HOM05D007419 ORTHO05D009327 2.0e-27 126.3 107 64.5
Rhsim01G0061500 Rhododendron simsii HOM05D007419 ORTHO05D009327 5.9e-27 124.8 113 66.4
Gohir.A13G200700 Gossypium hirsutum HOM05D007419 ORTHO05D009327 1.3e-26 123.6 108 63.0
Gohir.D13G206300 Gossypium hirsutum HOM05D007419 ORTHO05D009327 1.3e-26 123.6 108 62.0
Gorai.013G235200 Gossypium raimondii HOM05D007419 ORTHO05D009327 1.3e-26 123.6 108 62.0
CAN.G1315.3 Capsicum annuum HOM05D007419 ORTHO05D009327 1.5e-25 120.2 132 50.8
DCAR_014901 Daucus carota HOM05D007419 ORTHO05D009327 1.5e-25 120.2 101 66.3
arahy.Tifrunner.gnm1.ann1.XRJX6H Arachis hypogaea HOM05D007419 ORTHO05D009327 1.9e-25 119.8 119 59.7
CANSAT11G1590 Cannabis sativa HOM05D007419 ORTHO05D009327 1.9e-25 119.8 124 58.1
TWI34G1676 Tripterygium wilfordii HOM05D007419 ORTHO05D009327 2.5e-25 119.4 105 64.8
Glyma.17G111300 Glycine max HOM05D007419 ORTHO05D009327 1.2e-24 117.1 120 58.3
HanXRQChr12g0356641 Helianthus annuus HOM05D007419 ORTHO05D009327 1.6e-24 116.7 117 56.4
Lj4g0016099 Lotus japonicus HOM05D007419 ORTHO05D009327 1.6e-24 116.7 121 57.9
Ah.09g224820 Amaranthus hybridus HOM05D007419 ORTHO05D009327 2.7e-24 115.9 139 48.9
Lsat_1_v5_gn_5_91781 Lactuca sativa HOM05D007419 ORTHO05D009327 6.1e-24 114.8 116 59.5
TPR.G24826 Trifolium pratense HOM05D007419 ORTHO05D009327 1.4e-23 113.6 115 59.1
ECA234G0484 Erigeron canadensis HOM05D007419 ORTHO05D009327 3.0e-23 112.5 117 54.7
Phvul.003G168900 Phaseolus vulgaris HOM05D007419 ORTHO05D009327 5.2e-23 111.7 119 56.3
Lalb_Chr13g0301571 Lupinus albus HOM05D007419 ORTHO05D009327 1.2e-22 110.5 118 55.9
Psat4g039080 Pisum sativum HOM05D007419 ORTHO05D009327 1.2e-22 110.5 115 54.8
VMungo1215G0197 Vigna mungo HOM05D007419 ORTHO05D009327 1.2e-22 110.5 119 55.5
Lj7A626G73 Lonicera japonica HOM05D007419 ORTHO05D009327 4.4e-22 108.6 119 56.3
Ca_06942_v3 Cicer arietinum L. HOM05D007419 ORTHO05D009327 5.7e-22 108.2 115 57.4
Medtr4g115340 Medicago truncatula HOM05D007419 ORTHO05D009327 1.3e-21 107.1 116 58.6
ClCG06G011500 Citrullus lanatus HOM05D007419 ORTHO05D009327 1.8e-20 103.2 116 49.1
Migut.K00424 Erythranthe guttata HOM05D007419 ORTHO05D009327 4.1e-20 102.1 87 66.7
Sed0020697 Sechium edule HOM05D007419 ORTHO05D009327 1.2e-19 100.5 115 51.3
CsaV3_1G026730 Cucumis sativus L. HOM05D007419 ORTHO05D009327 7.7e-19 97.8 101 50.5
FAN19G0754 Fragaria x ananassa HOM05D007419 ORTHO05D009327 1.3e-18 97.1 121 51.2
SalBow1G7934 Salvia bowleyana HOM05D007419 ORTHO05D009327 2.9e-18 95.9 99 53.5
FvH4_1g02590 Fragaria vesca HOM05D007419 ORTHO05D009327 3.8e-18 95.5 121 50.4
FAN26G2390 Fragaria x ananassa HOM05D007419 ORTHO05D009327 3.8e-18 95.5 121 50.4
RcHm_v2.0_Chr2g0087621 Rosa chinensis HOM05D007419 ORTHO05D009327 5.0e-18 95.1 120 50.0
SGA_v2.0_scaffold109G31074 Striga asiatica HOM05D007419 ORTHO05D009327 4.2e-17 92.0 97 55.7
FAN28G1883 Fragaria x ananassa HOM05D007419 ORTHO05D009327 2.8e-16 89.4 121 48.8
FAN23G1807 Fragaria x ananassa HOM05D007419 ORTHO05D009327 3.0e-15 85.9 99 54.5
MELO3C029461.2 Cucumis melo HOM05D007419 ORTHO05D009327 5.2e-15 85.1 114 43.0
Glyma.13G160200 Glycine max HOM05D007419 ORTHO05D009327 3.3e-09 65.9 89 52.8
SEGI_33879 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 4.3e-09 65.5 86 40.7
Eucgr.C01386 Eucalyptus grandis HOM05D007419 ORTHO05D009327 9.8e-06 54.3 50 60.0


User provided reference genes

Program Settings