Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv10899 Davidia involucrata HOM05D012535 ORTHO05D011476 1.7e-64 249.2 128 100.0
Dinv18549 Davidia involucrata HOM05D014456 ORTHO05D011476 1.4e-39 166.4 129 68.2
Actinidia39291 Actinidia chinensis HOM05D014456 ORTHO05D011476 1.5e-20 103.2 129 49.6
Actinidia27021 Actinidia chinensis HOM05D014456 ORTHO05D011476 1.3e-16 90.1 129 45.7
CSS0036879 Camellia sinensis var. sinensis HOM05D014456 ORTHO05D011476 2.2e-16 89.4 131 45.0
Nitab4.5_0001134g0120 Nicotiana tabacum HOM05D012535 ORTHO05D011476 3.8e-16 88.6 145 44.1
GSVIVG01030651001 Vitis vinifera HOM05D015989 ORTHO05D011476 1.1e-15 87.0 131 43.5
Sopen07g026500 Solanum pennellii HOM05D012535 ORTHO05D011476 4.2e-15 85.1 146 44.5
Solyc07g052950.3 Solanum lycopersicum HOM05D012535 ORTHO05D011476 7.2e-15 84.3 146 43.8
Actinidia12487 Actinidia chinensis HOM05D014456 ORTHO05D011476 1.2e-14 83.6 129 43.4
CSS0035572 Camellia sinensis var. sinensis HOM05D014456 ORTHO05D011476 2.1e-14 82.8 128 46.9
CSS0024806 Camellia sinensis var. sinensis HOM05D014456 ORTHO05D011476 1.0e-13 80.5 128 46.1
TAR629G2024 Trochodendron aralioides HOM05D009454 ORTHO05D009427 1.0e-13 80.5 135 40.0
HanXRQChr15g0479371 Helianthus annuus HOM05D015989 ORTHO05D011476 1.8e-13 79.7 127 43.3
Oeu035822.1 Olea europaea HOM05D012535 ORTHO05D011476 8.8e-13 77.4 126 39.7
CSS0003727 Camellia sinensis var. sinensis HOM05D014456 ORTHO05D011476 1.2e-12 77.0 128 44.5
Lsat_1_v5_gn_3_43001 Lactuca sativa HOM05D015989 ORTHO05D011476 2.0e-12 76.3 126 42.9
Peaxi162Scf00007g01418 Petunia axillaris HOM05D012535 ORTHO05D011476 7.5e-12 74.3 142 38.7
Prupe.4G197700 Prunus persica HOM05D009454 ORTHO05D009427 1.3e-11 73.6 128 36.7
DCAR_009697 Daucus carota HOM05D012535 ORTHO05D011476 8.3e-11 70.9 143 39.9
Lsat_1_v5_gn_8_129700 Lactuca sativa HOM05D015989 ORTHO05D011476 8.3e-11 70.9 130 39.2
ECA246G2739 Erigeron canadensis HOM05D015989 ORTHO05D011476 1.4e-10 70.1 133 40.6
HanXRQChr15g0479391 Helianthus annuus HOM05D015989 ORTHO05D011476 1.4e-10 70.1 85 52.9
HanXRQChr17g0563731 Helianthus annuus HOM05D015989 ORTHO05D011476 1.4e-10 70.1 130 36.9
Lj1A751G18 Lonicera japonica HOM05D014456 ORTHO05D011476 1.4e-10 70.1 108 41.7
Cc05_g05350 Coffea canephora HOM05D012535 ORTHO05D011476 1.8e-10 69.7 138 39.9
TAR627G0356 Trochodendron aralioides HOM05D009454 ORTHO05D009427 2.4e-10 69.3 132 39.4
HanXRQChr17g0543181 Helianthus annuus HOM05D015989 ORTHO05D011476 4.1e-10 68.6 129 38.8
MD11G1229800 Malus domestica HOM05D023596 ORTHO05D009427 1.2e-09 67.0 128 38.3
Phvul.011G145600 Phaseolus vulgaris HOM05D012347 ORTHO05D009427 1.6e-09 66.6 130 38.5
TAR626G0489 Trochodendron aralioides HOM05D009454 ORTHO05D009427 2.0e-09 66.2 136 38.2
Aqoxy4G01911 Aquilegia oxysepala HOM05D035254 ORTHO05D031288 1.0e-08 63.9 133 36.8
TWI36G0330 Tripterygium wilfordii HOM05D035254 ORTHO05D031288 1.0e-08 63.9 128 35.2
CiPaw.04G119200 Carya illinoinensis HOM05D029042 ORTHO05D015201 2.2e-08 62.8 115 45.2
Haze_09576 Corylus avellana HOM05D009454 ORTHO05D009427 2.2e-08 62.8 137 35.8
Nn1g06922 Nelumbo nucifera HOM05D009454 ORTHO05D009427 2.9e-08 62.4 123 36.6
Ciclev10009866m.g Citrus clementina HOM05D009454 ORTHO05D009427 5.0e-08 61.6 138 36.2
Lalb_Chr19g0134651 Lupinus albus HOM05D012347 ORTHO05D009427 6.5e-08 61.2 139 36.0
Nitab4.5_0008561g0010 Nicotiana tabacum HOM05D012535 ORTHO05D011476 8.5e-08 60.8 129 38.8
TAR624G0118 Trochodendron aralioides HOM05D009454 ORTHO05D009427 1.1e-07 60.5 134 37.3
SGA_v2.0_scaffold49G18323 Striga asiatica HOM05D012535 ORTHO05D011476 1.9e-07 59.7 135 34.8
Rhsim06G0155600 Rhododendron simsii HOM05D014456 ORTHO05D011476 4.2e-07 58.5 102 41.2
Oeu042882.1 Olea europaea HOM05D017288 ORTHO05D017865 5.5e-07 58.2 129 34.1
PGR142G3426 Punica granatum HOM05D017922 ORTHO05D015201 5.5e-07 58.2 134 38.1
Duzib170G0628 Durio zibethinus HOM05D009454 ORTHO05D009427 1.2e-06 57.0 143 35.7
SalBow1G0916 Salvia bowleyana HOM05D012535 ORTHO05D011476 1.6e-06 56.6 128 34.4
Potri.011G130400 Populus trichocarpa HOM05D020515 ORTHO05D009427 2.1e-06 56.2 135 32.6
Sopen05g027520 Solanum pennellii HOM05D022819 ORTHO05D025920 2.7e-06 55.8 127 34.6
PGSC0003DMG400013973 Solanum tuberosum HOM05D022819 ORTHO05D025920 2.7e-06 55.8 124 34.7
Haze_12967 Corylus avellana HOM05D029042 ORTHO05D015201 3.6e-06 55.5 120 36.7
Actinidia35306 Actinidia chinensis HOM05D009454 ORTHO05D009427 4.7e-06 55.1 133 28.6
PGSC0003DMG400026162 Solanum tuberosum HOM05D012535 ORTHO05D011476 6.1e-06 54.7 122 38.5
MELO3C018790.2 Cucumis melo HOM05D049370 ORTHO05D044425 8.0e-06 54.3 133 30.8
Medtr4g081500 Medicago truncatula HOM05D012347 ORTHO05D009427 8.0e-06 54.3 140 35.7
TPR.G34097 Trifolium pratense HOM05D012347 ORTHO05D009427 8.0e-06 54.3 134 36.6


User provided reference genes

Program Settings