Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv10840 Davidia involucrata HOM05D012569 ORTHO05D006370 3.1e-124 448.4 208 100.0
Dinv04832 Davidia involucrata HOM05D012569 ORTHO05D006370 6.3e-61 238.0 223 51.6
Dinv03792 Davidia involucrata HOM05D012569 ORTHO05D006370 3.0e-50 202.6 196 47.4
Dinv12055 Davidia involucrata HOM05D008877 ORTHO05D006370 3.6e-24 115.9 170 34.7
Dinv15057 Davidia involucrata HOM05D012569 ORTHO05D006370 4.7e-24 115.5 165 40.6
Dinv10884 Davidia involucrata HOM05D025719 ORTHO05D006370 1.4e-23 114.0 190 32.1
Dinv36988 Davidia involucrata HOM05D010100 ORTHO05D006370 1.3e-18 97.4 218 28.0
Dinv09219 Davidia involucrata HOM05D010100 ORTHO05D006370 1.6e-16 90.5 221 27.1
Dinv15055 Davidia involucrata HOM05D012569 ORTHO05D006370 1.4e-15 87.4 77 54.5
Dinv10200 Davidia involucrata HOM05D008877 ORTHO05D006370 2.4e-15 86.7 97 40.2
Dinv38437 Davidia involucrata HOM05D008877 ORTHO05D006370 2.4e-15 86.7 97 40.2
PGSC0003DMG400019954 Solanum tuberosum HOM05D002612 ORTHO05D002859 2.4e-15 86.7 224 25.0
PGSC0003DMG400034627 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.4e-15 86.7 224 25.0
PGSC0003DMG400036183 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.4e-15 86.7 224 25.0
PGSC0003DMG400036968 Solanum tuberosum HOM05D008032 ORTHO05D006370 2.4e-15 86.7 224 25.0
Dinv04932 Davidia involucrata HOM05D010100 ORTHO05D006370 4.0e-15 85.9 176 27.3
PGSC0003DMG400019828 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.2e-14 84.3 226 24.3
Dinv08590 Davidia involucrata HOM05D010100 ORTHO05D006370 4.5e-14 82.4 142 32.4
Dinv15847 Davidia involucrata HOM05D012569 ORTHO05D006370 4.5e-14 82.4 73 53.4
CSS0042261 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 4.9e-13 79.0 183 27.3
Dinv09223 Davidia involucrata HOM05D005284 ORTHO05D006609 4.9e-13 79.0 96 35.4
PGSC0003DMG400026721 Solanum tuberosum HOM05D008032 ORTHO05D006370 8.4e-13 78.2 232 25.0
CSS0025386 Camellia sinensis var. sinensis HOM05D002560 ORTHO05D003782 5.4e-12 75.5 71 42.3
Dinv13641 Davidia involucrata HOM05D010100 ORTHO05D006370 2.7e-11 73.2 195 25.6
CSS0009477 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 3.5e-11 72.8 198 25.8
Solyc04g049380.4 Solanum lycopersicum HOM05D000290 ORTHO05D007415 1.0e-10 71.2 86 36.0
GSVIVG01026409001 Vitis vinifera HOM05D006671 ORTHO05D008637 1.0e-10 71.2 63 46.0
Dinv34008 Davidia involucrata HOM05D012569 ORTHO05D002418 1.3e-10 70.9 59 61.0
PGSC0003DMG400046683 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.8e-10 70.5 84 36.9
GSVIVG01034263001 Vitis vinifera HOM05D008877 ORTHO05D007704 2.3e-10 70.1 59 50.8
Dinv15124 Davidia involucrata HOM05D012569 ORTHO05D006370 3.0e-10 69.7 62 50.0
GSVIVG01002904001 Vitis vinifera HOM05D001447 ORTHO05D006370 3.9e-10 69.3 61 42.6
PGSC0003DMG400021934 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.1e-09 67.8 66 39.4
Actinidia10652 Actinidia chinensis HOM05D008877 ORTHO05D006370 1.5e-09 67.4 74 29.7
Dinv09464 Davidia involucrata HOM05D016752 ORTHO05D029222 1.9e-09 67.0 91 36.3
GSVIVG01031689001 Vitis vinifera HOM05D008877 ORTHO05D007704 1.9e-09 67.0 93 36.6
Solyc03g033830.2 Solanum lycopersicum HOM05D033312 ORTHO05D006370 4.3e-09 65.9 66 33.3
Actinidia06679 Actinidia chinensis HOM05D000314 ORTHO05D000189 7.4e-09 65.1 63 38.1
PGSC0003DMG400025637 Solanum tuberosum HOM05D008032 ORTHO05D006370 9.6e-09 64.7 69 34.8
SHI09511 Sapria himalayana HOM05D000003 ORTHO05D000004 1.6e-08 63.9 76 34.2
PGSC0003DMG400004492 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.6e-08 63.9 57 38.6
Sopen03g006580 Solanum pennellii HOM05D033312 ORTHO05D006370 2.1e-08 63.5 62 33.9
GSVIVG01020820001 Vitis vinifera HOM05D001610 ORTHO05D006370 2.8e-08 63.2 59 42.4
PGSC0003DMG400008733 Solanum tuberosum HOM05D008877 ORTHO05D006370 3.7e-08 62.8 66 39.4
PGSC0003DMG400023816 Solanum tuberosum HOM05D008032 ORTHO05D006370 4.8e-08 62.4 69 36.2
SHI23486 Sapria himalayana HOM05D006502 ORTHO05D007704 6.2e-08 62.0 70 34.3
Dinv03777 Davidia involucrata HOM05D012569 ORTHO05D006370 1.1e-07 61.2 32 68.8
PGSC0003DMG400047165 Solanum tuberosum HOM05D008032 ORTHO05D006370 1.1e-07 61.2 63 36.5
Dinv09220 Davidia involucrata HOM05D008877 ORTHO05D006370 1.4e-07 60.8 55 41.8
GSVIVG01016338001 Vitis vinifera HOM05D004699 ORTHO05D005668 1.8e-07 60.5 73 37.0
CAN.G530.3 Capsicum annuum HOM05D008032 ORTHO05D006370 3.1e-07 59.7 69 30.4
PGSC0003DMG400014630 Solanum tuberosum HOM05D008877 ORTHO05D006370 3.1e-07 59.7 66 36.4
CSS0004222 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D013045 4.0e-07 59.3 78 32.1
Nitab4.5_0001677g0010 Nicotiana tabacum HOM05D006502 ORTHO05D007704 4.0e-07 59.3 102 29.4
PGSC0003DMG400011942 Solanum tuberosum HOM05D008877 ORTHO05D006370 4.0e-07 59.3 38 57.9
Nitab4.5_0000317g0230 Nicotiana tabacum HOM05D008032 ORTHO05D007704 5.3e-07 58.9 66 33.3
Solyc06g036555.1 Solanum lycopersicum HOM05D000017 ORTHO05D006370 6.9e-07 58.5 66 36.4
SEGI_23959 Sequoiadendron giganteum HOM05D000047 ORTHO05D000002 9.0e-07 58.2 99 29.3
Solyc09g005450.1 Solanum lycopersicum HOM05D008032 ORTHO05D006370 9.0e-07 58.2 63 34.9
Sopen09g001430 Solanum pennellii HOM05D000003 ORTHO05D000004 9.0e-07 58.2 63 34.9
PGSC0003DMG400014749 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.5e-06 57.4 66 33.3
Nitab4.5_0003553g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.0e-06 57.0 67 34.3
CSS0020711 Camellia sinensis var. sinensis HOM05D014951 ORTHO05D006370 2.6e-06 56.6 63 39.7
Dinv02125 Davidia involucrata HOM05D000519 ORTHO05D001210 2.6e-06 56.6 67 40.3
Peaxi162Scf00386g00616 Petunia axillaris HOM05D001137 ORTHO05D005066 2.6e-06 56.6 66 31.8
PGSC0003DMG402010693 Solanum tuberosum HOM05D008032 ORTHO05D006370 3.4e-06 56.2 57 36.8
PGSC0003DMG400038517 Solanum tuberosum HOM05D008877 ORTHO05D006370 4.5e-06 55.8 66 34.8
PGSC0003DMG400043378 Solanum tuberosum HOM05D008877 ORTHO05D006370 4.5e-06 55.8 66 34.8
Nn5g28355 Nelumbo nucifera HOM05D023818 ORTHO05D022948 5.8e-06 55.5 62 32.3
Nitab4.5_0001360g0140 Nicotiana tabacum HOM05D006502 ORTHO05D007704 5.8e-06 55.5 65 35.4
Nitab4.5_0026746g0020 Nicotiana tabacum HOM05D006502 ORTHO05D007704 5.8e-06 55.5 112 27.7
Nitab4.5_0000664g0030 Nicotiana tabacum HOM05D006502 ORTHO05D005267 7.6e-06 55.1 66 33.3
Nn1g04738 Nelumbo nucifera HOM05D008032 ORTHO05D006370 9.9e-06 54.7 72 36.1
Nitab4.5_0001360g0010 Nicotiana tabacum HOM05D006502 ORTHO05D007704 9.9e-06 54.7 66 33.3
PGSC0003DMG400005369 Solanum tuberosum HOM05D008877 ORTHO05D006370 9.9e-06 54.7 63 28.6


User provided reference genes

Program Settings