Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv10478 Davidia involucrata HOM05D011424 ORTHO05D016274 2.3e-154 548.9 288 100.0
Dinv14338 Davidia involucrata HOM05D002925 ORTHO05D003247 1.2e-22 111.3 120 55.0
Dinv44782 Davidia involucrata HOM05D002925 ORTHO05D003247 6.8e-21 105.5 150 47.3
Dinv23442 Davidia involucrata HOM05D011424 ORTHO05D016274 5.8e-20 102.4 63 81.0
CSS0032438 Camellia sinensis var. sinensis HOM05D002925 ORTHO05D003247 6.4e-19 99.0 115 50.4
Actinidia33129 Actinidia chinensis HOM05D002925 ORTHO05D003247 1.9e-18 97.4 108 50.0
Dinv09880 Davidia involucrata HOM05D011424 ORTHO05D016274 7.0e-18 95.5 65 80.0
Dinv11363 Davidia involucrata HOM05D011424 ORTHO05D016274 2.7e-17 93.6 80 63.8
vmacro21264 Vaccinium macrocarpon HOM05D002925 ORTHO05D003247 3.5e-17 93.2 150 37.3
Rhsim06G0081200 Rhododendron simsii HOM05D002925 ORTHO05D003247 1.0e-16 91.7 139 42.4
Dinv40558 Davidia involucrata HOM05D011424 ORTHO05D016274 2.3e-16 90.5 70 71.4
Dinv08008 Davidia involucrata HOM05D011424 ORTHO05D016274 2.5e-15 87.0 55 78.2
Dinv24986 Davidia involucrata HOM05D011424 ORTHO05D016274 4.3e-15 86.3 55 81.8
QL12p036977 Quercus lobata HOM05D002925 ORTHO05D003247 2.8e-14 83.6 95 49.5
Hund26967 Selenicereus undatus HOM05D002925 ORTHO05D003247 3.1e-13 80.1 119 46.2
GSVIVG01009040001 Vitis vinifera HOM05D002925 ORTHO05D003247 8.9e-13 78.6 98 50.0
Dinv42641 Davidia involucrata HOM05D011424 ORTHO05D016274 7.5e-12 75.5 55 72.7
MSTRG.24975 Avicennia marina HOM05D002925 ORTHO05D003247 9.8e-12 75.1 127 40.9
Dinv39613 Davidia involucrata HOM05D011424 ORTHO05D016274 1.7e-11 74.3 49 75.5
Migut.C00133 Erythranthe guttata HOM05D002925 ORTHO05D003247 1.7e-11 74.3 101 44.6
Dinv39720 Davidia involucrata HOM05D011424 ORTHO05D016274 2.9e-11 73.6 54 74.1
Dinv06910 Davidia involucrata HOM05D011424 ORTHO05D016274 3.7e-11 73.2 47 83.0
Oeu024826.1 Olea europaea HOM05D002925 ORTHO05D003247 8.3e-11 72.0 102 42.2
CiPaw.07G178900 Carya illinoinensis HOM05D002925 ORTHO05D003247 1.1e-10 71.6 110 44.5
Oeu029761.1 Olea europaea HOM05D002925 ORTHO05D003247 1.4e-10 71.2 118 38.1
Solyc04g074250.3 Solanum lycopersicum HOM05D002925 ORTHO05D003247 3.2e-10 70.1 126 38.9
Nitab4.5_0006616g0010 Nicotiana tabacum HOM05D002925 ORTHO05D003247 4.1e-10 69.7 121 39.7
Sopen04g029390 Solanum pennellii HOM05D002925 ORTHO05D003247 4.1e-10 69.7 127 38.6
Haze_22282 Corylus avellana HOM05D002925 ORTHO05D003247 7.1e-10 68.9 119 40.3
PGSC0003DMG400006417 Solanum tuberosum HOM05D002925 ORTHO05D003247 9.2e-10 68.6 127 38.6
Nn1g05384 Nelumbo nucifera HOM05D002925 ORTHO05D003247 1.2e-09 68.2 127 39.4
AUR62018927 Chenopodium quinoa HOM05D002925 ORTHO05D003247 1.6e-09 67.8 127 41.7
PGR031G1025 Punica granatum HOM05D002925 ORTHO05D003247 2.7e-09 67.0 134 39.6
TAR625G1540 Trochodendron aralioides HOM05D002925 ORTHO05D003247 7.8e-09 65.5 126 38.1
Peaxi162Scf00392g00416 Petunia axillaris HOM05D002925 ORTHO05D003247 1.0e-08 65.1 113 42.5
Nn5g30080 Nelumbo nucifera HOM05D002925 ORTHO05D003247 1.3e-08 64.7 126 36.5
TAR076G0002 Trochodendron aralioides HOM05D002925 ORTHO05D003247 1.3e-08 64.7 130 38.5
Atru.chr10.1121 Acer truncatum HOM05D002925 ORTHO05D003247 3.0e-08 63.5 108 41.7
HanXRQChr05g0145421 Helianthus annuus HOM05D002925 ORTHO05D003247 3.0e-08 63.5 121 35.5
SalBow7G1697 Salvia bowleyana HOM05D002925 ORTHO05D003247 3.0e-08 63.5 128 36.7
CANSAT25G0699 Cannabis sativa HOM05D002925 ORTHO05D003247 5.1e-08 62.8 98 44.9
Aqoxy6G00762 Aquilegia oxysepala HOM05D002925 ORTHO05D003247 1.1e-07 61.6 111 39.6
AUR62027772 Chenopodium quinoa HOM05D002925 ORTHO05D003247 1.1e-07 61.6 93 45.2
Sabra02G0076700 Salix brachista HOM05D002925 ORTHO05D003247 1.1e-07 61.6 142 36.6
Sed0026617 Sechium edule HOM05D002925 ORTHO05D003247 1.5e-07 61.2 121 36.4
Ciclev10000205m.g Citrus clementina HOM05D002925 ORTHO05D003247 1.9e-07 60.8 117 35.9
EL10Ac1g01207 Beta vulgaris HOM05D002925 ORTHO05D003247 3.3e-07 60.1 147 34.7
MD00G1009700 Malus domestica HOM05D002925 ORTHO05D003247 3.3e-07 60.1 114 37.7
Cfa013644 Carpinus fangiana HOM05D002925 ORTHO05D003247 5.6e-07 59.3 118 39.8
FvH4_5g37120 Fragaria vesca HOM05D002925 ORTHO05D003247 7.3e-07 58.9 117 41.0
FAN18G3145 Fragaria x ananassa HOM05D002925 ORTHO05D003247 7.3e-07 58.9 117 41.0
MD08G1184300 Malus domestica HOM05D002925 ORTHO05D003247 7.3e-07 58.9 123 35.0
ClCG08G011160 Citrullus lanatus HOM05D002925 ORTHO05D003247 9.5e-07 58.5 178 33.1
CsaV3_2G029730 Cucumis sativus L. HOM05D002925 ORTHO05D003247 1.2e-06 58.2 119 35.3
MBI02_g35745_MAGBIO Magnolia biondii HOM05D002925 ORTHO05D003247 1.2e-06 58.2 101 42.6
Ah.05g169890 Amaranthus hybridus HOM05D002925 ORTHO05D003247 1.6e-06 57.8 135 36.3
Prupe.1G518500 Prunus persica HOM05D002925 ORTHO05D003247 2.1e-06 57.4 101 41.6
FAN04G0469 Fragaria x ananassa HOM05D002925 ORTHO05D003247 2.8e-06 57.0 117 40.2
FAN13G2209 Fragaria x ananassa HOM05D002925 ORTHO05D003247 2.8e-06 57.0 117 40.2
Phvul.009G031600 Phaseolus vulgaris HOM05D002925 ORTHO05D003247 2.8e-06 57.0 97 40.2
RcHm_v2.0_Chr7g0243951 Rosa chinensis HOM05D002925 ORTHO05D003247 2.8e-06 57.0 107 43.9
SGA_v2.0_scaffold74G24580 Striga asiatica HOM05D002925 ORTHO05D003247 2.8e-06 57.0 159 33.3
VMungo1309G2842 Vigna mungo HOM05D002925 ORTHO05D003247 3.6e-06 56.6 101 42.6
Cc10_g07100 Coffea canephora HOM05D002925 ORTHO05D003247 6.2e-06 55.8 75 46.7
Glyma.04G101200 Glycine max HOM05D002925 ORTHO05D003247 8.1e-06 55.5 98 39.8
Glyma.06G102900 Glycine max HOM05D002925 ORTHO05D003247 8.1e-06 55.5 100 39.0
PGSC0003DMG400036857 Solanum tuberosum HOM05D002925 ORTHO05D003247 8.1e-06 55.5 119 32.8


User provided reference genes

Program Settings