Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv10471 Davidia involucrata HOM05D008835 ORTHO05D011094 8.4e-81 305.4 441 100.0
Hma1.2p1_0277F.1_g111660 Hydrangea macrophylla HOM05D008835 ORTHO05D011094 3.0e-46 190.7 191 78.0
Hma1.2p1_0277F.1_g111665 Hydrangea macrophylla HOM05D008835 ORTHO05D011094 3.0e-46 190.7 191 78.0
CSS0047579 Camellia sinensis var. sinensis HOM05D008835 ORTHO05D011094 4.8e-44 183.3 194 59.8
RcHm_v2.0_Chr4g0443001 Rosa chinensis HOM05D008835 ORTHO05D011094 2.7e-39 167.5 192 69.3
Prupe.1G333800 Prunus persica HOM05D008835 ORTHO05D011094 2.5e-37 161.0 187 67.4
CANSAT01G3131 Cannabis sativa HOM05D008835 ORTHO05D011094 8.2e-36 156.0 194 43.8
Sc15g0000240 Simmondsia chinensis HOM05D008835 ORTHO05D011094 3.1e-35 154.1 193 50.8
Cpa.g.sc2.190 Carica papaya HOM05D008835 ORTHO05D011094 2.9e-33 147.5 194 49.5
Lj3P864T25 Lonicera japonica HOM05D008835 ORTHO05D011094 1.1e-32 145.6 82 84.1
Aa31LG2G8150 Aethionema arabicum HOM05D008835 ORTHO05D011094 6.1e-31 139.8 194 45.9
Sp2g13190 Schrenkiella parvula HOM05D008835 ORTHO05D011094 7.9e-31 139.4 195 43.6
Cc11_g07380 Coffea canephora HOM05D008835 ORTHO05D011094 1.8e-30 138.3 197 40.1
AL5G10840 Arabidopsis lyrata HOM05D008835 ORTHO05D011094 8.8e-30 136.0 194 45.4
AT2G01740 Arabidopsis thaliana HOM05D008835 ORTHO05D011094 1.1e-29 135.6 194 44.3
Thhalv10003932m.g Eutrema salsugineum HOM05D008835 ORTHO05D011094 2.2e-28 131.3 194 44.3
C09p30430 Brassica napus HOM05D008835 ORTHO05D011094 4.8e-28 130.2 197 49.2
BolC9t55906H Brassica oleracea HOM05D008835 ORTHO05D011094 6.3e-28 129.8 197 49.2
CARHR144310 Cardamine hirsuta HOM05D008835 ORTHO05D011094 1.1e-27 129.0 196 44.4
BcaC04g21553 Brassica carinata HOM05D008835 ORTHO05D011094 1.8e-27 128.3 197 48.7
BraA09t37964Z Brassica rapa HOM05D008835 ORTHO05D011094 3.1e-27 127.5 197 48.7
TAR374G1374 Trochodendron aralioides HOM05D008835 ORTHO05D011094 5.3e-27 126.7 191 63.4
A09p23600 Brassica napus HOM05D008835 ORTHO05D011094 1.6e-26 125.2 197 48.7
Gohir.D01G139800 Gossypium hirsutum HOM05D008835 ORTHO05D011094 2.7e-23 114.4 189 61.4
Gorai.002G171900 Gossypium raimondii HOM05D008835 ORTHO05D011094 2.7e-23 114.4 189 61.4
CsaV3_5G014350 Cucumis sativus L. HOM05D008835 ORTHO05D011094 4.0e-22 110.5 192 43.2
COL.COLO4_16597 Corchorus olitorius HOM05D002001 ORTHO05D006833 5.2e-22 110.2 193 56.5
Nn4g26594 Nelumbo nucifera HOM05D008835 ORTHO05D011094 5.2e-22 110.2 87 57.5
Sed0018402 Sechium edule HOM05D008835 ORTHO05D011094 1.5e-21 108.6 191 58.6
Gohir.A01G146600 Gossypium hirsutum HOM05D008835 ORTHO05D011094 4.8e-20 103.6 189 59.3
Carub.0005s0069 Capsella rubella HOM05D008835 ORTHO05D011094 3.5e-18 97.4 87 49.4
ATR0753G127 Amborella trichopoda HOM05D008835 ORTHO05D011094 8.0e-15 86.3 87 47.1
Actinidia34037 Actinidia chinensis HOM05D008835 ORTHO05D011094 1.8e-14 85.1 51 74.5
RcHm_v2.0_Chr2g0123271 Rosa chinensis HOM05D008835 ORTHO05D011094 4.8e-12 77.0 81 48.1
ClCG07G005540 Citrullus lanatus HOM05D008835 ORTHO05D011094 1.6e-10 72.0 54 57.4
Thecc.02G293200 Theobroma cacao HOM05D008835 ORTHO05D030527 1.1e-08 65.9 54 59.3
Cc11_g07320 Coffea canephora HOM05D008835 ORTHO05D011094 1.6e-07 62.0 54 46.3
Oeu044008.1 Olea europaea HOM05D008835 ORTHO05D011094 2.1e-07 61.6 54 51.9


User provided reference genes

Program Settings