Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv10439 Davidia involucrata HOM05D004226 ORTHO05D004842 2.1e-101 372.5 199 100.0
Dinv28812 Davidia involucrata HOM05D004226 ORTHO05D004842 9.3e-70 267.3 165 85.5
Actinidia23795 Actinidia chinensis HOM05D004226 ORTHO05D004842 5.0e-63 245.0 164 76.8
Actinidia30018 Actinidia chinensis HOM05D004226 ORTHO05D004842 8.8e-60 234.2 164 77.4
Lj2A1117T18 Lonicera japonica HOM05D004226 ORTHO05D004842 2.6e-56 222.6 164 74.4
Rhsim13G0052600 Rhododendron simsii HOM05D004226 ORTHO05D004842 2.6e-56 222.6 164 73.2
Lsat_1_v5_gn_8_98041 Lactuca sativa HOM05D004226 ORTHO05D004842 4.5e-56 221.9 169 71.0
vmacro02815 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 1.0e-55 220.7 164 71.3
Hma1.2p1_0781F.1_g216920 Hydrangea macrophylla HOM05D004226 ORTHO05D004842 1.3e-55 220.3 178 71.9
Actinidia34543 Actinidia chinensis HOM05D004226 ORTHO05D004842 2.9e-55 219.2 164 72.0
Duzib138G1045 Durio zibethinus HOM05D004226 ORTHO05D004842 7.2e-54 214.5 162 71.0
VMungo1383G2422 Vigna mungo HOM05D004226 ORTHO05D004842 6.1e-53 211.5 162 67.9
TAR362G0792 Trochodendron aralioides HOM05D004226 ORTHO05D004842 7.9e-53 211.1 162 67.3
Duzib133G0243 Durio zibethinus HOM05D004226 ORTHO05D004842 1.0e-52 210.7 162 69.1
Eucgr.H00726 Eucalyptus grandis HOM05D004226 ORTHO05D004842 1.0e-52 210.7 163 67.5
Nitab4.5_0009151g0020 Nicotiana tabacum HOM05D004226 ORTHO05D004842 1.0e-52 210.7 188 64.9
TAR365G1191 Trochodendron aralioides HOM05D004226 ORTHO05D004842 2.3e-52 209.5 161 65.8
Nitab4.5_0000038g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 3.0e-52 209.1 180 66.7
HanXRQChr08g0231431 Helianthus annuus HOM05D004226 ORTHO05D004842 1.1e-51 207.2 167 69.5
Phvul.008G136900 Phaseolus vulgaris HOM05D004226 ORTHO05D004842 1.1e-51 207.2 162 66.0
Gohir.A11G142500 Gossypium hirsutum HOM05D004226 ORTHO05D004842 2.0e-51 206.5 162 67.9
Gorai.007G159600 Gossypium raimondii HOM05D004226 ORTHO05D004842 2.0e-51 206.5 162 67.3
Gohir.D11G148800 Gossypium hirsutum HOM05D004226 ORTHO05D004842 2.6e-51 206.1 162 67.9
Haze_03501 Corylus avellana HOM05D004226 ORTHO05D004842 5.7e-51 204.9 167 66.5
Lalb_Chr01g0021991 Lupinus albus HOM05D004226 ORTHO05D004842 7.4e-51 204.5 165 63.6
Lalb_Chr03g0041091 Lupinus albus HOM05D004226 ORTHO05D004842 1.3e-50 203.8 163 64.4
Cfa010569 Carpinus fangiana HOM05D004226 ORTHO05D004842 2.8e-50 202.6 167 66.5
Cc01_g16140 Coffea canephora HOM05D004226 ORTHO05D004842 2.8e-50 202.6 169 71.6
CiPaw.13G055300 Carya illinoinensis HOM05D004226 ORTHO05D004842 4.8e-50 201.8 163 64.4
Migut.N00664 Erythranthe guttata HOM05D004226 ORTHO05D004842 4.8e-50 201.8 169 66.9
Aqoxy2G03959 Aquilegia oxysepala HOM05D004226 ORTHO05D004842 1.1e-49 200.7 164 62.2
Glyma.18G152900 Glycine max HOM05D004226 ORTHO05D004842 4.1e-49 198.7 162 63.6
HanXRQChr09g0257641 Helianthus annuus HOM05D004226 ORTHO05D004842 4.1e-49 198.7 166 65.7
MSTRG.18494 Avicennia marina HOM05D004226 ORTHO05D004842 1.6e-48 196.8 166 64.5
EL10Ac5g10626 Beta vulgaris HOM05D004226 ORTHO05D004842 1.6e-48 196.8 166 67.5
PGR083G1064 Punica granatum HOM05D004226 ORTHO05D004842 5.9e-48 194.9 170 61.8
Glyma.08G344200 Glycine max HOM05D004226 ORTHO05D004842 2.2e-47 193.0 163 62.0
ECA236G1737 Erigeron canadensis HOM05D004226 ORTHO05D004842 2.9e-47 192.6 166 63.3
HanXRQChr16g0507911 Helianthus annuus HOM05D004226 ORTHO05D004842 2.9e-47 192.6 171 62.0
Thecc.01G211100 Theobroma cacao HOM05D004226 ORTHO05D004842 6.5e-47 191.4 162 63.6
Cpa.g.sc8.73 Carica papaya HOM05D004226 ORTHO05D004842 1.9e-46 189.9 162 62.3
Nn1g08255 Nelumbo nucifera HOM05D004226 ORTHO05D004842 2.5e-46 189.5 186 53.2
Hund02794 Selenicereus undatus HOM05D004226 ORTHO05D004842 2.5e-46 189.5 162 66.0
vmacro14692 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 2.5e-46 189.5 159 67.9
DCAR_012646 Daucus carota HOM05D004226 ORTHO05D004842 4.2e-46 188.7 168 64.3
Lj1g0015941 Lotus japonicus HOM05D004226 ORTHO05D004842 4.2e-46 188.7 165 63.0
Manes.12G054100 Manihot esculenta HOM05D004226 ORTHO05D004842 7.2e-46 188.0 164 64.6
CANSAT01G0104 Cannabis sativa HOM05D004226 ORTHO05D004842 9.4e-46 187.6 168 63.1
TAR633G1997 Trochodendron aralioides HOM05D004226 ORTHO05D004842 1.2e-45 187.2 161 60.9
CSS0019192 Camellia sinensis var. sinensis HOM05D004226 ORTHO05D004842 1.6e-45 186.8 127 78.7
Oeu003656.1 Olea europaea HOM05D004226 ORTHO05D004842 2.1e-45 186.4 163 62.6
MSTRG.21303 Avicennia marina HOM05D004226 ORTHO05D004842 1.4e-44 183.7 166 60.8
Rhsim01G0248500 Rhododendron simsii HOM05D004226 ORTHO05D004842 5.2e-44 181.8 162 64.8
Peaxi162Scf00372g00004 Petunia axillaris HOM05D004226 ORTHO05D004842 6.7e-44 181.4 156 65.4
Hund09468 Selenicereus undatus HOM05D004226 ORTHO05D004842 6.7e-44 181.4 170 61.2
SGA_v2.0_scaffold8G04494 Striga asiatica HOM05D004226 ORTHO05D004842 6.7e-44 181.4 165 63.6
TWI18G1341 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 1.5e-43 180.3 162 59.9
Ciclev10016998m.g Citrus clementina HOM05D004226 ORTHO05D004842 3.3e-43 179.1 163 60.1
TWI36G1598 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 7.5e-43 177.9 163 60.1
SGA_v2.0_scaffold624G53238 Striga asiatica HOM05D004226 ORTHO05D004842 2.2e-42 176.4 165 61.8
ECA247G2547 Erigeron canadensis HOM05D004226 ORTHO05D004842 3.7e-42 175.6 155 61.3
DCAR_018624 Daucus carota HOM05D004226 ORTHO05D004842 4.8e-42 175.3 163 59.5
Oeu057834.2 Olea europaea HOM05D000039 ORTHO05D005440 6.3e-42 174.9 142 64.1
QL09p046251 Quercus lobata HOM05D004226 ORTHO05D004842 6.3e-42 174.9 170 59.4
ClCG05G015470 Citrullus lanatus HOM05D004226 ORTHO05D004842 8.2e-42 174.5 161 59.0
AUR62008122 Chenopodium quinoa HOM05D004226 ORTHO05D004842 5.3e-41 171.8 166 60.8
AUR62028700 Chenopodium quinoa HOM05D004226 ORTHO05D004842 1.2e-40 170.6 164 61.0
Sc17g0001670 Simmondsia chinensis HOM05D004226 ORTHO05D004842 2.0e-40 169.9 161 57.1
SGA_v2.0_scaffold29G12070 Striga asiatica HOM05D004226 ORTHO05D004842 3.5e-40 169.1 194 54.6
Medtr7g052690 Medicago truncatula HOM05D004226 ORTHO05D004842 5.9e-40 168.3 166 57.8
Nitab4.5_0002167g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 7.7e-40 167.9 163 62.0
Nitab4.5_0002311g0050 Nicotiana tabacum HOM05D004226 ORTHO05D004842 7.7e-40 167.9 163 61.3
Psat3g151000 Pisum sativum HOM05D004226 ORTHO05D004842 1.0e-39 167.5 162 58.0
THA.LOC104802646 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 1.0e-39 167.5 166 59.0
MELO3C003732.2 Cucumis melo HOM05D004226 ORTHO05D004842 1.7e-39 166.8 155 56.1
Potri.002G251200 Populus trichocarpa HOM05D004226 ORTHO05D004842 2.9e-39 166.0 164 61.0
COL.COLO4_26572 Corchorus olitorius HOM05D004226 ORTHO05D004842 3.8e-39 165.6 165 58.2
CsaV3_3G046080 Cucumis sativus L. HOM05D004226 ORTHO05D004842 3.8e-39 165.6 188 49.5
TPR.G26804 Trifolium pratense HOM05D004226 ORTHO05D004842 3.8e-39 165.6 186 53.8
Ah.11g051030 Amaranthus hybridus HOM05D004226 ORTHO05D004842 1.2e-37 160.6 155 59.4
DCAR_004767 Daucus carota HOM05D004226 ORTHO05D004842 1.6e-37 160.2 154 60.4
THA.LOC104822467 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 1.6e-37 160.2 162 55.6
Sabra02G0191000 Salix brachista HOM05D004226 ORTHO05D004842 4.0e-36 155.6 192 51.6
PGSC0003DMG400027348 Solanum tuberosum HOM05D004226 ORTHO05D004842 1.5e-35 153.7 162 56.2
PGSC0003DMG400020653 Solanum tuberosum HOM05D004226 ORTHO05D004842 1.7e-34 150.2 162 56.8
Solyc06g007610.2 Solanum lycopersicum HOM05D004226 ORTHO05D004842 2.2e-34 149.8 191 50.3
ATR0686G035 Amborella trichopoda HOM05D004226 ORTHO05D004842 3.7e-34 149.1 158 53.8
THA.LOC104818997 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 3.7e-34 149.1 163 55.2
Sopen06g002500 Solanum pennellii HOM05D004226 ORTHO05D004842 4.8e-34 148.7 162 54.3
Sopen11g003480 Solanum pennellii HOM05D004226 ORTHO05D004842 4.8e-34 148.7 162 54.3
Duzib168G0485 Durio zibethinus HOM05D004226 ORTHO05D004842 8.3e-34 147.9 142 57.7
HPP92_024259 Vanilla planifolia HOM05D004226 ORTHO05D004842 3.1e-33 146.0 169 49.1
Gohir.D07G094900 Gossypium hirsutum HOM05D004226 ORTHO05D004842 4.1e-33 145.6 148 56.1
Gorai.001G102200 Gossypium raimondii HOM05D004226 ORTHO05D004842 4.1e-33 145.6 148 56.1
CAN.G181.39 Capsicum annuum HOM05D004226 ORTHO05D004842 2.0e-32 143.3 141 58.9
Gohir.A07G090200 Gossypium hirsutum HOM05D004226 ORTHO05D004842 2.0e-32 143.3 148 54.7
Sed0006210 Sechium edule HOM05D004226 ORTHO05D004842 2.0e-32 143.3 165 53.3
CDE05G1161 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 2.7e-32 142.9 170 47.6
Aa31sc186G10 Aethionema arabicum HOM05D004226 ORTHO05D004842 4.5e-32 142.1 161 53.4
Prupe.8G190400 Prunus persica HOM05D004226 ORTHO05D004842 2.9e-31 139.4 162 51.9
Thhalv10005050m.g Eutrema salsugineum HOM05D004226 ORTHO05D004842 5.0e-31 138.7 158 54.4
Migut.D00735 Erythranthe guttata HOM05D004226 ORTHO05D004842 8.5e-31 137.9 160 51.2
Sp2g18850 Schrenkiella parvula HOM05D004226 ORTHO05D004842 8.5e-31 137.9 162 54.9
SEGI_00481 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 1.1e-30 137.5 170 49.4
PSO017G4362 Papaver somniferum HOM05D004226 ORTHO05D004842 1.5e-30 137.1 170 47.6
PSO675G4654 Papaver somniferum HOM05D004226 ORTHO05D004842 1.9e-30 136.7 170 47.6
Lj3g0001126 Lotus japonicus HOM05D004226 ORTHO05D004842 3.2e-30 136.0 144 53.5
Mapoly0001s0501 Marchantia polymorpha HOM05D004226 ORTHO05D004842 7.2e-30 134.8 158 47.5
C09p04850 Brassica napus HOM05D004226 ORTHO05D004842 1.2e-29 134.0 157 53.5
Migut.D00732 Erythranthe guttata HOM05D004226 ORTHO05D004842 1.6e-29 133.7 158 51.3
BcaC06g30793 Brassica carinata HOM05D004226 ORTHO05D004842 2.8e-29 132.9 165 52.7
BcaC03g17654 Brassica carinata HOM05D004226 ORTHO05D004842 6.1e-29 131.7 162 51.9
BolC2t11714H Brassica oleracea HOM05D004226 ORTHO05D004842 6.1e-29 131.7 162 51.9
BolC7t44438H Brassica oleracea HOM05D004226 ORTHO05D004842 6.1e-29 131.7 163 50.9
Duzib138G0271 Durio zibethinus HOM05D004226 ORTHO05D004842 6.1e-29 131.7 139 52.5
C02p56560 Brassica napus HOM05D004226 ORTHO05D004842 1.0e-28 131.0 162 51.9
Lj3g0009756 Lotus japonicus HOM05D004226 ORTHO05D004842 1.0e-28 131.0 150 50.7
A02p37490 Brassica napus HOM05D004226 ORTHO05D004842 2.3e-28 129.8 162 51.2
A06p39150 Brassica napus HOM05D004226 ORTHO05D004842 5.2e-28 128.6 147 53.1
Duzib170G0075 Durio zibethinus HOM05D004226 ORTHO05D004842 6.8e-28 128.3 139 54.7
BcaC04g23773 Brassica carinata HOM05D004226 ORTHO05D004842 1.2e-27 127.5 162 52.5
BolC9t53412H Brassica oleracea HOM05D004226 ORTHO05D004842 1.2e-27 127.5 162 52.5
BraA06t26830Z Brassica rapa HOM05D004226 ORTHO05D004842 1.2e-27 127.5 147 52.4
C07p39180 Brassica napus HOM05D004226 ORTHO05D004842 1.5e-27 127.1 165 50.3
Duzib211G0475 Durio zibethinus HOM05D004226 ORTHO05D004842 2.6e-27 126.3 139 51.1
BraA02t08736Z Brassica rapa HOM05D004226 ORTHO05D004842 3.4e-27 125.9 162 50.6
A09p04540 Brassica napus HOM05D004226 ORTHO05D004842 1.7e-26 123.6 165 51.5
BraA09t36089Z Brassica rapa HOM05D004226 ORTHO05D004842 1.7e-26 123.6 165 51.5
CDE05G0628 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 2.2e-26 123.2 120 56.7
Duzib205G0826 Durio zibethinus HOM05D004226 ORTHO05D004842 1.8e-25 120.2 175 41.7
Carub.0008s0806 Capsella rubella HOM05D004226 ORTHO05D004842 9.2e-25 117.9 138 50.7
SHI10249 Sapria himalayana HOM05D004226 ORTHO05D004842 5.9e-24 115.2 136 50.7
Ca_07469_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 1.0e-23 114.4 89 65.2
Ca_30573_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 1.0e-23 114.4 89 65.2
Atru.chr6.3547 Acer truncatum HOM05D004226 ORTHO05D004842 1.3e-23 114.0 129 48.1
SMO146G0354 Selaginella moellendorffii HOM05D004226 ORTHO05D004842 3.8e-23 112.5 129 48.1
Duzib147G0221 Durio zibethinus HOM05D004226 ORTHO05D004842 1.2e-21 107.5 125 49.6
AT5G48480 Arabidopsis thaliana HOM05D004226 ORTHO05D004842 2.1e-21 106.7 164 43.9
Lj2P1154T27 Lonicera japonica HOM05D004226 ORTHO05D004842 1.4e-20 104.0 77 72.7
BcaB07g30025 Brassica carinata HOM05D004226 ORTHO05D004842 8.9e-20 101.3 158 42.4
AL8G21330 Arabidopsis lyrata HOM05D004226 ORTHO05D004842 1.5e-19 100.5 165 44.2
CARHR183600 Cardamine hirsuta HOM05D004226 ORTHO05D004842 2.6e-19 99.8 160 41.9
Cfa011865 Carpinus fangiana HOM05D004226 ORTHO05D004842 2.6e-19 99.8 91 60.4
FvH4_2g17810 Fragaria vesca HOM05D004226 ORTHO05D004842 3.7e-18 95.9 166 42.8
FAN15G3314 Fragaria x ananassa HOM05D004226 ORTHO05D004842 4.9e-18 95.5 164 44.5
FAN24G0678 Fragaria x ananassa HOM05D004226 ORTHO05D004842 4.9e-18 95.5 166 42.8
RcHm_v2.0_Chr6g0282841 Rosa chinensis HOM05D004226 ORTHO05D004842 2.4e-17 93.2 151 45.0
FAN27G2858 Fragaria x ananassa HOM05D004226 ORTHO05D004842 7.0e-17 91.7 153 45.1
FAN27G3147 Fragaria x ananassa HOM05D004226 ORTHO05D004842 7.0e-17 91.7 153 45.1
Sc19g0005500 Simmondsia chinensis HOM05D004226 ORTHO05D004842 4.6e-16 89.0 80 57.5
MD05G1159600 Malus domestica HOM05D004226 ORTHO05D004842 3.9e-15 85.9 169 36.1
MD10G1152100 Malus domestica HOM05D004226 ORTHO05D004842 3.9e-15 85.9 166 36.1
Psat0s337g0040 Pisum sativum HOM05D004226 ORTHO05D004842 5.6e-14 82.0 72 58.3
BcaB07g30020 Brassica carinata HOM05D004226 ORTHO05D004842 9.5e-14 81.3 105 51.4
SGA_v2.0_scaffold85G26613 Striga asiatica HOM05D005727 ORTHO05D007324 3.6e-13 79.3 88 55.7
Glyma.14G148600 Glycine max HOM05D004226 ORTHO05D004842 6.2e-13 78.6 69 58.0
BcaC06g31007 Brassica carinata HOM05D004226 ORTHO05D004842 1.8e-12 77.0 158 39.9
Nn4g25974 Nelumbo nucifera HOM05D066638 ORTHO05D004842 4.0e-12 75.9 68 50.0
unitig_0.g1219 Utricularia gibba HOM05D004226 ORTHO05D004842 6.8e-12 75.1 71 57.7
Nn7g37876 Nelumbo nucifera HOM05D001231 ORTHO05D001012 8.9e-12 74.7 87 44.8
Pp3c13_5750 Physcomitrium patens HOM05D004226 ORTHO05D004842 2.6e-11 73.2 140 34.3
Nn7g37465 Nelumbo nucifera HOM05D004226 ORTHO05D004842 2.9e-10 69.7 68 45.6
SEGI_39221 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 3.2e-09 66.2 79 49.4
Rhsim06G0095600 Rhododendron simsii HOM05D003225 ORTHO05D338509 2.0e-08 63.5 70 55.7
SEGI_14551 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 2.7e-08 63.2 61 55.7
SEGI_24806 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 2.7e-08 63.2 61 55.7
Ciclev10023033m.g Citrus clementina HOM05D004226 ORTHO05D004842 1.0e-07 61.2 51 64.7
DCAR_023429 Daucus carota HOM05D057861 ORTHO05D004842 2.3e-07 60.1 141 34.0
Medtr8g011510 Medicago truncatula HOM05D004226 ORTHO05D004842 2.3e-07 60.1 131 36.6
FvH4_7g07350 Fragaria vesca HOM05D020336 ORTHO05D022570 1.1e-06 57.8 134 31.3
Peaxi162Scf00585g01023 Petunia axillaris HOM05D004226 ORTHO05D004842 1.1e-06 57.8 76 50.0
RcHm_v2.0_Chr1g0337361 Rosa chinensis HOM05D020336 ORTHO05D022570 2.5e-06 56.6 134 29.9
FAN06G1571 Fragaria x ananassa HOM05D020336 ORTHO05D022570 3.3e-06 56.2 147 31.3
Ciclev10023098m.g Citrus clementina HOM05D004226 ORTHO05D004842 5.6e-06 55.5 48 60.4
FAN10G0857 Fragaria x ananassa HOM05D020336 ORTHO05D022570 5.6e-06 55.5 134 31.3
DCAR_015184 Daucus carota HOM05D033564 ORTHO05D178306 7.3e-06 55.1 51 54.9


User provided reference genes

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