Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv10419 Davidia involucrata HOM05D001967 ORTHO05D001929 2.8e-25 117.9 61 100.0
Dinv40203 Davidia involucrata HOM05D001967 ORTHO05D001929 2.8e-25 117.9 61 100.0
Hma1.2p1_0085F.1_g044500 Hydrangea macrophylla HOM05D001967 ORTHO05D001929 1.2e-23 112.5 61 95.1
Dinv28308 Davidia involucrata HOM05D001967 ORTHO05D001929 5.9e-23 110.2 61 93.4
GSVIVG01022303001 Vitis vinifera HOM05D001967 ORTHO05D001929 1.3e-22 109.0 61 91.8
Cfa007100 Carpinus fangiana HOM05D001967 ORTHO05D001929 2.9e-22 107.8 61 93.4
Cc07_g12030 Coffea canephora HOM05D001967 ORTHO05D001929 6.5e-22 106.7 61 90.2
CSS0034362 Camellia sinensis var. sinensis HOM05D001967 ORTHO05D001929 1.1e-21 105.9 61 90.2
FAN19G0840 Fragaria x ananassa HOM05D001967 ORTHO05D001929 1.4e-21 105.5 61 90.2
FAN23G0601 Fragaria x ananassa HOM05D001967 ORTHO05D001929 1.4e-21 105.5 61 90.2
FAN28G2793 Fragaria x ananassa HOM05D001967 ORTHO05D001929 1.4e-21 105.5 61 90.2
MD15G1228800 Malus domestica HOM05D001967 ORTHO05D001929 1.4e-21 105.5 61 90.2
Oeu012538.2 Olea europaea HOM05D001967 ORTHO05D001929 1.4e-21 105.5 61 91.8
CiPaw.08G182200 Carya illinoinensis HOM05D001967 ORTHO05D001929 1.9e-21 105.1 61 90.2
MD02G1113600 Malus domestica HOM05D001967 ORTHO05D001929 1.9e-21 105.1 61 90.2
Prupe.7G185300 Prunus persica HOM05D001967 ORTHO05D001929 1.9e-21 105.1 61 90.2
QL06p053245 Quercus lobata HOM05D001967 ORTHO05D001929 1.9e-21 105.1 60 90.0
FAN26G0578 Fragaria x ananassa HOM05D001967 ORTHO05D001929 4.2e-21 104.0 61 88.5
Actinidia28750 Actinidia chinensis HOM05D001967 ORTHO05D001929 1.2e-20 102.4 61 86.9
QL04p001512 Quercus lobata HOM05D004544 ORTHO05D001929 1.6e-20 102.1 60 86.7
Manes.18G003200 Manihot esculenta HOM05D001967 ORTHO05D001929 2.7e-20 101.3 61 85.2
COL.COLO4_05641 Corchorus olitorius HOM05D001967 ORTHO05D001929 6.1e-20 100.1 61 83.6
COL.COLO4_37861 Corchorus olitorius HOM05D001967 ORTHO05D001929 6.1e-20 100.1 61 83.6
MBI05_g21105_MAGBIO Magnolia biondii HOM05D001967 ORTHO05D001929 6.1e-20 100.1 61 85.2
Sc15g0004110 Simmondsia chinensis HOM05D001967 ORTHO05D001929 1.0e-19 99.4 61 83.6
RcHm_v2.0_Chr2g0096941 Rosa chinensis HOM05D001967 ORTHO05D001929 1.3e-19 99.0 62 85.5
TWI53G1787 Tripterygium wilfordii HOM05D001967 ORTHO05D001929 1.3e-19 99.0 59 84.7
TAR628G1224 Trochodendron aralioides HOM05D001967 ORTHO05D001929 1.3e-19 99.0 61 83.6
Dinv31973 Davidia involucrata HOM05D001967 ORTHO05D001929 1.8e-19 98.6 61 80.3
Potri.005G254200 Populus trichocarpa HOM05D001967 ORTHO05D001929 1.8e-19 98.6 61 80.3
PGR119G2119 Punica granatum HOM05D001967 ORTHO05D001929 1.8e-19 98.6 61 82.0
Thecc.08G063300 Theobroma cacao HOM05D001967 ORTHO05D001929 1.8e-19 98.6 61 80.3
Duzib041G0204 Durio zibethinus HOM05D001967 ORTHO05D001929 2.3e-19 98.2 61 80.3
Eucgr.I02214 Eucalyptus grandis HOM05D001967 ORTHO05D001929 2.3e-19 98.2 61 83.6
Gohir.A02G085600 Gossypium hirsutum HOM05D001967 ORTHO05D001929 3.0e-19 97.8 61 80.3
Gohir.D02G101300 Gossypium hirsutum HOM05D001967 ORTHO05D001929 3.0e-19 97.8 61 80.3
Gorai.005G114700 Gossypium raimondii HOM05D001967 ORTHO05D001929 3.0e-19 97.8 61 80.3
HanXRQChr16g0531981 Helianthus annuus HOM05D001967 ORTHO05D001929 3.0e-19 97.8 59 84.7
TWI36G0255 Tripterygium wilfordii HOM05D001967 ORTHO05D001929 3.0e-19 97.8 61 80.3
ATR0807G156 Amborella trichopoda HOM05D001967 ORTHO05D001929 3.9e-19 97.4 61 82.0
AUR62035152 Chenopodium quinoa HOM05D001967 ORTHO05D001929 5.1e-19 97.1 61 83.6
PSO170G4897 Papaver somniferum HOM05D001967 ORTHO05D001929 6.7e-19 96.7 61 80.3
PSO210G4686 Papaver somniferum HOM05D001967 ORTHO05D001929 6.7e-19 96.7 61 80.3
Gohir.A01G102900 Gossypium hirsutum HOM05D001967 ORTHO05D001929 8.7e-19 96.3 61 77.0
Gohir.D01G088200 Gossypium hirsutum HOM05D001967 ORTHO05D001929 8.7e-19 96.3 61 77.0
Gorai.002G113900 Gossypium raimondii HOM05D001967 ORTHO05D001929 8.7e-19 96.3 61 77.0
Potri.007G064100 Populus trichocarpa HOM05D001967 ORTHO05D001929 8.7e-19 96.3 61 78.7
QL11p008146 Quercus lobata HOM05D001967 ORTHO05D001929 8.7e-19 96.3 60 83.3
QL11p008296 Quercus lobata HOM05D001967 ORTHO05D001929 8.7e-19 96.3 60 83.3
Sabra07G0051600 Salix brachista HOM05D001967 ORTHO05D001929 8.7e-19 96.3 61 78.7
TAR376G0952 Trochodendron aralioides HOM05D001967 ORTHO05D001929 8.7e-19 96.3 61 80.3
CANSAT54G2719 Cannabis sativa HOM05D001967 ORTHO05D001929 1.1e-18 95.9 61 78.7
DCAR_009862 Daucus carota HOM05D001967 ORTHO05D001929 1.1e-18 95.9 61 80.3
MBI08_g06886_MAGBIO Magnolia biondii HOM05D001967 ORTHO05D001929 1.1e-18 95.9 61 80.3
Lsat_1_v5_gn_3_69860 Lactuca sativa HOM05D001967 ORTHO05D001929 1.9e-18 95.1 59 83.1
Ciclev10002493m.g Citrus clementina HOM05D001967 ORTHO05D001929 2.5e-18 94.7 63 82.5
QL03p010156 Quercus lobata HOM05D001967 ORTHO05D001929 2.5e-18 94.7 60 80.0
Cpa.g.sc6.356 Carica papaya HOM05D001967 ORTHO05D001929 3.3e-18 94.4 62 85.5
Carub.0001s3434 Capsella rubella HOM05D001967 ORTHO05D001929 4.3e-18 94.0 59 78.0
CARHR035220 Cardamine hirsuta HOM05D001967 ORTHO05D001929 4.3e-18 94.0 59 78.0
Aa31sc158G20 Aethionema arabicum HOM05D000557 ORTHO05D002315 5.7e-18 93.6 60 76.7
AT1G42960 Arabidopsis thaliana HOM05D001967 ORTHO05D001929 5.7e-18 93.6 59 78.0
EL10Ac1g01900 Beta vulgaris HOM05D001967 ORTHO05D001929 5.7e-18 93.6 57 84.2
Manes.05G125300 Manihot esculenta HOM05D001967 ORTHO05D001929 5.7e-18 93.6 62 80.6
Atru.chr13.91 Acer truncatum HOM05D001967 ORTHO05D001929 7.4e-18 93.2 62 80.6
AL1G51420 Arabidopsis lyrata HOM05D001967 ORTHO05D001929 7.4e-18 93.2 59 78.0
Haze_03633 Corylus avellana HOM05D001967 ORTHO05D001929 7.4e-18 93.2 88 64.8
Hma1.2p1_0612F.1_g188960 Hydrangea macrophylla HOM05D001967 ORTHO05D001929 7.4e-18 93.2 61 75.4
Sabra05G0081700 Salix brachista HOM05D001967 ORTHO05D001929 7.4e-18 93.2 61 75.4
Sp1g32110 Schrenkiella parvula HOM05D001967 ORTHO05D001929 7.4e-18 93.2 59 78.0
TWI12G0573 Tripterygium wilfordii HOM05D001967 ORTHO05D001929 7.4e-18 93.2 61 75.4
Thhalv10005036m.g Eutrema salsugineum HOM05D001967 ORTHO05D001929 1.3e-17 92.4 59 78.0
MBI05_g21106_MAGBIO Magnolia biondii HOM05D001967 ORTHO05D001929 1.3e-17 92.4 59 84.7
THA.LOC104813181 Tarenaya hassleriana HOM05D001967 ORTHO05D001929 1.3e-17 92.4 61 75.4
arahy.Tifrunner.gnm1.ann1.0W4FI5 Arachis hypogaea HOM05D001967 ORTHO05D001929 1.6e-17 92.0 59 76.3
arahy.Tifrunner.gnm1.ann1.29ZW60 Arachis hypogaea HOM05D001967 ORTHO05D001929 1.6e-17 92.0 59 76.3
BcaB04g17774 Brassica carinata HOM05D001967 ORTHO05D001929 1.6e-17 92.0 59 76.3
BcaC07g37452 Brassica carinata HOM05D001967 ORTHO05D001929 1.6e-17 92.0 59 76.3
A08p07660 Brassica napus HOM05D001967 ORTHO05D001929 1.6e-17 92.0 59 76.3
C08p09240 Brassica napus HOM05D001967 ORTHO05D001929 1.6e-17 92.0 59 76.3
BolC8t47773H Brassica oleracea HOM05D001967 ORTHO05D001929 1.6e-17 92.0 59 76.3
BraA08t32780Z Brassica rapa HOM05D001967 ORTHO05D001929 1.6e-17 92.0 59 76.3
QL02p015248 Quercus lobata HOM05D001967 ORTHO05D001929 1.6e-17 92.0 60 76.7
Duzib116G0687 Durio zibethinus HOM05D001967 ORTHO05D001929 2.8e-17 91.3 59 76.3
Eucgr.F03576 Eucalyptus grandis HOM05D001967 ORTHO05D001929 2.8e-17 91.3 59 78.0
Ah.00g001080 Amaranthus hybridus HOM05D001967 ORTHO05D001929 3.7e-17 90.9 57 80.7
CiPaw.07G135300 Carya illinoinensis HOM05D001967 ORTHO05D001929 3.7e-17 90.9 61 75.4
CDE06G2203 Ceratophyllum demersum HOM05D001967 ORTHO05D001929 3.7e-17 90.9 62 79.0
PGR083G1401 Punica granatum HOM05D001967 ORTHO05D001929 3.7e-17 90.9 58 75.9
MELO3C017045.2 Cucumis melo HOM05D001967 ORTHO05D001929 4.8e-17 90.5 61 73.8
GSVIVG01013404001 Vitis vinifera HOM05D001967 ORTHO05D001929 4.8e-17 90.5 68 72.1
ClCG11G018900 Citrullus lanatus HOM05D001967 ORTHO05D001929 6.3e-17 90.1 61 73.8
CSS0016090 Camellia sinensis var. sinensis HOM05D001967 ORTHO05D001929 1.1e-16 89.4 61 73.8
Glyma.04G015800 Glycine max HOM05D001967 ORTHO05D001929 1.1e-16 89.4 59 74.6
Glyma.06G015800 Glycine max HOM05D001967 ORTHO05D001929 1.1e-16 89.4 59 74.6
Nn5g31019 Nelumbo nucifera HOM05D001967 ORTHO05D001929 1.1e-16 89.4 61 80.3
Sed0020344 Sechium edule HOM05D001967 ORTHO05D001929 1.1e-16 89.4 61 72.1
VMungo1309G1464 Vigna mungo HOM05D001967 ORTHO05D001929 1.1e-16 89.4 59 72.9
THA.LOC104806873 Tarenaya hassleriana HOM05D001967 ORTHO05D001929 1.4e-16 89.0 62 75.8
CiPaw.08G076000 Carya illinoinensis HOM05D001967 ORTHO05D001929 1.8e-16 88.6 61 72.1
Lalb_Chr23g0265631 Lupinus albus HOM05D001967 ORTHO05D001929 1.8e-16 88.6 59 72.9
Aqoxy6G01570 Aquilegia oxysepala HOM05D001967 ORTHO05D001929 2.4e-16 88.2 59 74.6
Eucgr.F01794 Eucalyptus grandis HOM05D001967 ORTHO05D001929 2.4e-16 88.2 61 72.1
Peaxi162Scf00680g00037 Petunia axillaris HOM05D001967 ORTHO05D001929 2.4e-16 88.2 61 72.1
Phvul.009G006700 Phaseolus vulgaris HOM05D001967 ORTHO05D001929 2.4e-16 88.2 59 72.9
CDE06G0397 Ceratophyllum demersum HOM05D001967 ORTHO05D001929 3.1e-16 87.8 60 80.0
Lj2A502T33 Lonicera japonica HOM05D001967 ORTHO05D001929 3.1e-16 87.8 61 77.0
Nitab4.5_0009646g0040 Nicotiana tabacum HOM05D001967 ORTHO05D001929 3.1e-16 87.8 61 72.1
Solyc04g082640.3 Solanum lycopersicum HOM05D001967 ORTHO05D001929 3.1e-16 87.8 61 72.1
Sopen04g036270 Solanum pennellii HOM05D001967 ORTHO05D001929 3.1e-16 87.8 61 72.1
PGSC0003DMG400009993 Solanum tuberosum HOM05D001967 ORTHO05D001929 3.1e-16 87.8 61 72.1
Cfa014119 Carpinus fangiana HOM05D001967 ORTHO05D001929 4.1e-16 87.4 61 73.8
Haze_22839 Corylus avellana HOM05D001967 ORTHO05D001929 4.1e-16 87.4 61 73.8
Glyma.11G087400 Glycine max HOM05D001967 ORTHO05D001929 4.1e-16 87.4 61 75.4
Peaxi162Scf00064g01327 Petunia axillaris HOM05D001967 ORTHO05D001929 4.1e-16 87.4 61 73.8
Prupe.5G007900 Prunus persica HOM05D001967 ORTHO05D001929 4.1e-16 87.4 61 73.8
Solyc12g094630.2 Solanum lycopersicum HOM05D001967 ORTHO05D001929 4.1e-16 87.4 61 75.4
Sopen12g031530 Solanum pennellii HOM05D001967 ORTHO05D001929 4.1e-16 87.4 61 75.4
Medtr3g115930 Medicago truncatula HOM05D001967 ORTHO05D001929 5.3e-16 87.0 59 71.2
PGSC0003DMG400029407 Solanum tuberosum HOM05D001967 ORTHO05D001929 5.3e-16 87.0 61 73.8
HPP92_012828 Vanilla planifolia HOM05D001967 ORTHO05D001929 5.3e-16 87.0 61 70.5
Oeu017904.1 Olea europaea HOM05D001967 ORTHO05D001929 6.9e-16 86.7 61 75.4
Migut.N02975 Erythranthe guttata HOM05D001967 ORTHO05D001929 1.2e-15 85.9 61 73.8
Lj1g0012342 Lotus japonicus HOM05D001967 ORTHO05D001929 1.2e-15 85.9 60 73.3
Ca_15397_v3 Cicer arietinum L. HOM05D001967 ORTHO05D001929 2.6e-15 84.7 59 67.8
Nitab4.5_0000407g0090 Nicotiana tabacum HOM05D001967 ORTHO05D001929 2.6e-15 84.7 61 72.1
TPR.G38097 Trifolium pratense HOM05D001967 ORTHO05D001929 2.6e-15 84.7 59 67.8
Nitab4.5_0006485g0020 Nicotiana tabacum HOM05D001967 ORTHO05D001929 4.5e-15 84.0 61 72.1
Nn6g31669 Nelumbo nucifera HOM05D001967 ORTHO05D001929 5.9e-15 83.6 61 75.4
PGR031G1932 Punica granatum HOM05D001967 ORTHO05D001929 7.7e-15 83.2 59 69.5
Cc10_g00400 Coffea canephora HOM05D001967 ORTHO05D001929 1.0e-14 82.8 61 72.1
Glyma.01G157600 Glycine max HOM05D001967 ORTHO05D001929 1.0e-14 82.8 60 71.7
CAN.G208.28 Capsicum annuum HOM05D001967 ORTHO05D001929 1.3e-14 82.4 61 72.1
Lj4A810G55 Lonicera japonica HOM05D001967 ORTHO05D001929 1.3e-14 82.4 61 68.9
Peaxi162Scf01114g00011 Petunia axillaris HOM05D001967 ORTHO05D001929 1.3e-14 82.4 61 67.2
MD06G1006300 Malus domestica HOM05D001967 ORTHO05D001929 1.7e-14 82.0 58 70.7
Oeu026113.1 Olea europaea HOM05D001967 ORTHO05D001929 1.7e-14 82.0 61 72.1
TPR.G33780 Trifolium pratense HOM05D001967 ORTHO05D001929 2.2e-14 81.6 59 71.2
MSTRG.24506 Avicennia marina HOM05D001967 ORTHO05D001929 2.9e-14 81.3 61 68.9
QL10p008349 Quercus lobata HOM05D001967 ORTHO05D001929 5.0e-14 80.5 60 73.3
Lj4A239T48 Lonicera japonica HOM05D001967 ORTHO05D001929 8.5e-14 79.7 77 63.6
Lalb_Chr09g0324801 Lupinus albus HOM05D001967 ORTHO05D001929 8.5e-14 79.7 60 68.3
MD00G1135400 Malus domestica HOM05D001967 ORTHO05D001929 8.5e-14 79.7 61 70.5
Oeu062564.1 Olea europaea HOM05D001967 ORTHO05D001929 1.1e-13 79.3 61 65.6
VMungo1215G2446 Vigna mungo HOM05D001967 ORTHO05D001929 1.9e-13 78.6 65 64.6
Medtr5g024680 Medicago truncatula HOM05D001967 ORTHO05D001929 2.5e-13 78.2 59 69.5
MSTRG.22090 Avicennia marina HOM05D001967 ORTHO05D001929 3.2e-13 77.8 58 65.5
Psat5g010480 Pisum sativum HOM05D001967 ORTHO05D001929 3.2e-13 77.8 58 67.2
Psat5g246600 Pisum sativum HOM05D001967 ORTHO05D001929 3.2e-13 77.8 58 67.2
Lj2g0013657 Lotus japonicus HOM05D001967 ORTHO05D001929 4.2e-13 77.4 60 66.7
Lalb_Chr16g0380141 Lupinus albus HOM05D001967 ORTHO05D001929 5.5e-13 77.0 60 70.0
Lalb_Chr05g0214901 Lupinus albus HOM05D001967 ORTHO05D001929 7.2e-13 76.6 52 75.0
Nitab4.5_0010090g0020 Nicotiana tabacum HOM05D001967 ORTHO05D001929 7.2e-13 76.6 61 60.7
arahy.Tifrunner.gnm1.ann1.33TIY8 Arachis hypogaea HOM05D001967 ORTHO05D001929 9.4e-13 76.3 63 63.5
arahy.Tifrunner.gnm1.ann1.LD9RN9 Arachis hypogaea HOM05D001967 ORTHO05D001929 9.4e-13 76.3 63 63.5
Ca_24992_v3 Cicer arietinum L. HOM05D001967 ORTHO05D001929 9.4e-13 76.3 56 73.2
FvH4_5g25770 Fragaria vesca HOM05D001967 ORTHO05D001929 9.4e-13 76.3 61 65.6
FAN04G3258 Fragaria x ananassa HOM05D001967 ORTHO05D001929 9.4e-13 76.3 61 65.6
Phvul.002G117800 Phaseolus vulgaris HOM05D001967 ORTHO05D001929 9.4e-13 76.3 58 67.2
CSS0036961 Camellia sinensis var. sinensis HOM05D001967 ORTHO05D001929 1.6e-12 75.5 127 43.3
RcHm_v2.0_Chr7g0216241 Rosa chinensis HOM05D001967 ORTHO05D001929 2.1e-12 75.1 61 62.3
CsaV3_4G037500 Cucumis sativus L. HOM05D001967 ORTHO05D001929 3.6e-12 74.3 61 62.3
HanXRQChr14g0427821 Helianthus annuus HOM05D001967 ORTHO05D001929 3.6e-12 74.3 58 69.0
HanXRQChr05g0144791 Helianthus annuus HOM05D001967 ORTHO05D001929 4.6e-12 73.9 54 75.9
Nitab4.5_0000486g0190 Nicotiana tabacum HOM05D001967 ORTHO05D001929 1.0e-11 72.8 64 57.8
THA.LOC104801939 Tarenaya hassleriana HOM05D001967 ORTHO05D001929 1.0e-11 72.8 79 57.0
vmacro20617 Vaccinium macrocarpon HOM05D001967 ORTHO05D001929 1.0e-11 72.8 46 78.3
SalBow7G3190 Salvia bowleyana HOM05D001967 ORTHO05D001929 1.8e-11 72.0 61 59.0
Lsat_1_v5_gn_0_40520 Lactuca sativa HOM05D001967 ORTHO05D001929 1.5e-10 68.9 54 70.4
Psat2g148360 Pisum sativum HOM05D001967 ORTHO05D001929 1.5e-10 68.9 56 64.3
ECA232G1934 Erigeron canadensis HOM05D001967 ORTHO05D001929 2.6e-10 68.2 44 77.3
unitig_0.g2076 Utricularia gibba HOM05D001967 ORTHO05D001929 2.6e-10 68.2 61 57.4
Lsat_1_v5_gn_2_1441 Lactuca sativa HOM05D001967 ORTHO05D001929 1.3e-09 65.9 43 74.4
SGA_v2.0_scaffold54G19636 Striga asiatica HOM05D000557 ORTHO05D002315 1.3e-09 65.9 58 60.3
Hund05088 Selenicereus undatus HOM05D001967 ORTHO05D001929 1.7e-09 65.5 46 71.7
Actinidia15512 Actinidia chinensis HOM05D001967 ORTHO05D001929 6.3e-09 63.5 41 75.6
Actinidia17065 Actinidia chinensis HOM05D001967 ORTHO05D001929 6.3e-09 63.5 41 75.6
DCAR_016790 Daucus carota HOM05D001967 ORTHO05D001929 1.4e-08 62.4 57 57.9
unitig_747.g21535 Utricularia gibba HOM05D001967 ORTHO05D001929 1.5e-07 58.9 80 43.8
Rhsim10G0192700 Rhododendron simsii HOM05D001967 ORTHO05D001929 2.0e-07 58.5 53 58.5
PSO541G0962 Papaver somniferum HOM05D001967 ORTHO05D001929 4.5e-07 57.4 57 56.1
Thecc.01G003000 Theobroma cacao HOM05D001967 ORTHO05D001929 4.5e-07 57.4 38 76.3
vmacro20618 Vaccinium macrocarpon HOM05D001967 ORTHO05D001929 4.5e-07 57.4 47 63.8
Mapoly0007s0082 Marchantia polymorpha HOM05D001967 ORTHO05D001929 1.3e-06 55.8 43 67.4


User provided reference genes

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