Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv10366 Davidia involucrata HOM05D000141 ORTHO05D000780 1.1e-47 193.0 99 100.0
Lj1C895T15 Lonicera japonica HOM05D000141 ORTHO05D000780 4.5e-33 144.4 98 74.5
GSVIVG01014752001 Vitis vinifera HOM05D000141 ORTHO05D000780 1.6e-30 136.0 99 72.7
CSS0006265 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D000780 3.6e-30 134.8 103 72.8
CSS0049127 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D000780 3.6e-30 134.8 103 72.8
TAR629G0235 Trochodendron aralioides HOM05D000141 ORTHO05D000780 1.8e-29 132.5 99 67.7
Cc05_g15410 Coffea canephora HOM05D000141 ORTHO05D000780 6.8e-29 130.6 102 68.6
TWI38G2189 Tripterygium wilfordii HOM05D000141 ORTHO05D000780 6.8e-29 130.6 106 65.1
Thecc.07G007000 Theobroma cacao HOM05D000141 ORTHO05D000780 8.9e-29 130.2 99 67.7
Actinidia03655 Actinidia chinensis HOM05D000141 ORTHO05D000780 1.5e-28 129.4 86 76.7
Manes.01G004466 Manihot esculenta HOM05D000141 ORTHO05D000780 1.5e-28 129.4 98 69.4
Duzib213G0723 Durio zibethinus HOM05D000141 ORTHO05D000780 7.5e-28 127.1 99 64.6
TAR627G0677 Trochodendron aralioides HOM05D000141 ORTHO05D000780 1.3e-27 126.3 107 61.7
TAR029G0001 Trochodendron aralioides HOM05D000141 ORTHO05D000780 8.3e-27 123.6 107 60.7
Haze_09875 Corylus avellana HOM05D000141 ORTHO05D000780 1.1e-26 123.2 100 69.0
vmacro09618 Vaccinium macrocarpon HOM05D000141 ORTHO05D000780 3.2e-26 121.7 99 68.7
Cfa021900 Carpinus fangiana HOM05D000141 ORTHO05D000780 9.2e-26 120.2 102 67.6
COL.COLO4_07750 Corchorus olitorius HOM05D000141 ORTHO05D000780 9.2e-26 120.2 103 66.0
Potri.001G467600 Populus trichocarpa HOM05D000141 ORTHO05D000780 1.6e-25 119.4 97 68.0
Potri.011G165200 Populus trichocarpa HOM05D000141 ORTHO05D000780 2.7e-25 118.6 99 68.7
FAN25G0245 Fragaria x ananassa HOM05D000141 ORTHO05D000780 5.9e-25 117.5 95 62.1
FvH4_3g42160 Fragaria vesca HOM05D000141 ORTHO05D000780 7.8e-25 117.1 94 63.8
QL08p002584 Quercus lobata HOM05D000141 ORTHO05D000780 1.0e-24 116.7 99 65.7
Rhsim04G0010000 Rhododendron simsii HOM05D000141 ORTHO05D000780 1.0e-24 116.7 90 71.1
RcHm_v2.0_Chr5g0075421 Rosa chinensis HOM05D000141 ORTHO05D000780 1.3e-24 116.3 94 62.8
Sabra16G0317300 Salix brachista HOM05D000141 ORTHO05D000780 6.6e-24 114.0 98 64.3
MBI14_g02350_MAGBIO Magnolia biondii HOM05D000141 ORTHO05D000780 8.6e-24 113.6 99 60.6
Prupe.6G029300 Prunus persica HOM05D000141 ORTHO05D000780 1.6e-22 109.4 96 60.4
Sabra11G0140300 Salix brachista HOM05D000141 ORTHO05D000780 1.1e-21 106.7 99 60.6
FAN16G0346 Fragaria x ananassa HOM05D000141 ORTHO05D000780 3.1e-21 105.1 88 61.4
FAN11G3002 Fragaria x ananassa HOM05D000141 ORTHO05D000780 6.8e-21 104.0 88 61.4
Oeu049424.1 Olea europaea HOM05D000141 ORTHO05D000780 6.8e-21 104.0 96 59.4
FAN21G1623 Fragaria x ananassa HOM05D000141 ORTHO05D000780 8.9e-21 103.6 88 60.2
Aqoxy4G02308 Aquilegia oxysepala HOM05D000141 ORTHO05D000780 2.0e-20 102.4 96 55.2
Peaxi162Scf00232g00118 Petunia axillaris HOM05D000141 ORTHO05D000780 2.6e-20 102.1 128 49.2
Oeu019698.3 Olea europaea HOM05D000141 ORTHO05D000780 5.8e-20 100.9 99 58.6
Eucgr.F03668 Eucalyptus grandis HOM05D000141 ORTHO05D000780 9.8e-20 100.1 97 57.7
Gohir.A04G004200 Gossypium hirsutum HOM05D000141 ORTHO05D000780 2.2e-19 99.0 99 54.5
Gohir.D05G385900 Gossypium hirsutum HOM05D000141 ORTHO05D000780 3.7e-19 98.2 99 54.5
Gorai.009G452300 Gossypium raimondii HOM05D000141 ORTHO05D000780 6.4e-19 97.4 99 53.5
Ca_06421_v3 Cicer arietinum L. HOM05D000141 ORTHO05D000780 8.3e-19 97.1 97 53.6
VMungo0540G0374 Vigna mungo HOM05D000141 ORTHO05D000780 1.4e-18 96.3 94 56.4
Nitab4.5_0000152g0270 Nicotiana tabacum HOM05D000141 ORTHO05D000780 1.9e-18 95.9 130 46.9
Glyma.08G333300 Glycine max HOM05D000141 ORTHO05D000780 2.4e-18 95.5 94 56.4
Glyma.18G073500 Glycine max HOM05D000141 ORTHO05D000780 2.4e-18 95.5 94 55.3
TPR.G1294 Trifolium pratense HOM05D000141 ORTHO05D000780 4.1e-18 94.7 97 56.7
CsaV3_7G021510 Cucumis sativus L. HOM05D000141 ORTHO05D000780 5.4e-18 94.4 101 57.4
Nitab4.5_0001112g0020 Nicotiana tabacum HOM05D000141 ORTHO05D000780 5.4e-18 94.4 129 45.7
Actinidia00842 Actinidia chinensis HOM05D000141 ORTHO05D000780 7.0e-18 94.0 53 88.7
Cpa.g.sc12.99 Carica papaya HOM05D000141 ORTHO05D000780 7.0e-18 94.0 124 47.6
ClCG09G021590 Citrullus lanatus HOM05D000141 ORTHO05D000780 1.2e-17 93.2 100 54.0
LjContig00081g0013445 Lotus japonicus HOM05D000141 ORTHO05D000780 1.2e-17 93.2 97 52.6
Lalb_Chr15g0082391 Lupinus albus HOM05D000141 ORTHO05D000780 2.0e-17 92.4 95 52.6
HanXRQChr05g0160291 Helianthus annuus HOM05D000141 ORTHO05D000780 3.5e-17 91.7 99 52.5
Lj6g0023738 Lotus japonicus HOM05D000141 ORTHO05D000780 3.5e-17 91.7 90 55.6
MD03G1037300 Malus domestica HOM05D000141 ORTHO05D000780 6.0e-17 90.9 91 56.0
MD11G1038400 Malus domestica HOM05D000141 ORTHO05D000780 6.0e-17 90.9 89 56.2
Glyma.14G011100 Glycine max HOM05D000141 ORTHO05D000780 1.3e-16 89.7 97 50.5
Nn1g07583 Nelumbo nucifera HOM05D000141 ORTHO05D000780 1.7e-16 89.4 96 52.1
Ca_14839_v3 Cicer arietinum L. HOM05D000141 ORTHO05D000780 2.3e-16 89.0 94 54.3
Migut.M01620 Erythranthe guttata HOM05D000141 ORTHO05D000780 2.3e-16 89.0 95 51.6
PGSC0003DMG400022156 Solanum tuberosum HOM05D000141 ORTHO05D000780 3.0e-16 88.6 130 45.4
ECA246G4244 Erigeron canadensis HOM05D000141 ORTHO05D000780 6.6e-16 87.4 100 54.0
Medtr3g060900 Medicago truncatula HOM05D000141 ORTHO05D000780 6.6e-16 87.4 94 51.1
Solyc07g065880.4 Solanum lycopersicum HOM05D000141 ORTHO05D000780 6.6e-16 87.4 130 45.4
Sopen07g034070 Solanum pennellii HOM05D000141 ORTHO05D000780 6.6e-16 87.4 130 45.4
VMungo0647G1283 Vigna mungo HOM05D000141 ORTHO05D000780 6.6e-16 87.4 97 51.5
Phvul.006G059300 Phaseolus vulgaris HOM05D000141 ORTHO05D000780 8.6e-16 87.0 94 53.2
Medtr5g096570 Medicago truncatula HOM05D000141 ORTHO05D000780 1.5e-15 86.3 93 53.8
Phvul.008G281800 Phaseolus vulgaris HOM05D000141 ORTHO05D000780 1.5e-15 86.3 98 51.0
TPR.G17948 Trifolium pratense HOM05D000141 ORTHO05D000780 1.9e-15 85.9 94 52.1
arahy.Tifrunner.gnm1.ann1.255VJ8 Arachis hypogaea HOM05D000141 ORTHO05D000780 2.5e-15 85.5 93 51.6
EL10Ac4g07516 Beta vulgaris HOM05D000141 ORTHO05D000780 4.3e-15 84.7 95 52.6
CANSAT11G2360 Cannabis sativa HOM05D000141 ORTHO05D000780 4.3e-15 84.7 99 52.5
Gohir.D01G078900 Gossypium hirsutum HOM05D000141 ORTHO05D000780 2.1e-14 82.4 102 51.0
DCAR_013262 Daucus carota HOM05D000141 ORTHO05D000780 3.6e-14 81.6 98 50.0
CAN.G623.42 Capsicum annuum HOM05D000141 ORTHO05D000780 6.2e-14 80.9 130 42.3
arahy.Tifrunner.gnm1.ann1.GJ51RN Arachis hypogaea HOM05D000141 ORTHO05D000780 1.1e-13 80.1 92 50.0
Glyma.02G302800 Glycine max HOM05D000141 ORTHO05D000780 1.8e-13 79.3 96 46.9
AUR62035645 Chenopodium quinoa HOM05D000141 ORTHO05D000780 2.3e-13 79.0 100 49.0
Oeu017998.1 Olea europaea HOM05D000141 ORTHO05D000780 2.3e-13 79.0 89 53.9
Gorai.002G103500 Gossypium raimondii HOM05D000141 ORTHO05D000780 5.2e-13 77.8 102 49.0
SGA_v2.0_scaffold7G03524 Striga asiatica HOM05D000141 ORTHO05D000780 1.5e-12 76.3 99 46.5
Psat5g166160 Pisum sativum HOM05D000141 ORTHO05D000780 2.0e-12 75.9 94 50.0
Ciclev10007289m.g Citrus clementina HOM05D000141 ORTHO05D000780 7.5e-12 73.9 46 73.9
PSO675G8224 Papaver somniferum HOM05D000141 ORTHO05D000780 9.9e-12 73.6 104 46.2
ATR0751G101 Amborella trichopoda HOM05D000141 ORTHO05D000780 1.3e-11 73.2 98 45.9
PSO541G2180 Papaver somniferum HOM05D000141 ORTHO05D000780 2.2e-11 72.4 96 46.9
AUR62017159 Chenopodium quinoa HOM05D000141 ORTHO05D000780 3.7e-11 71.6 100 45.0
Psat2g005960 Pisum sativum HOM05D000141 ORTHO05D000780 3.7e-11 71.6 97 44.3
PGR031G3171 Punica granatum HOM05D000141 ORTHO05D000780 1.4e-10 69.7 65 58.5
Sed0001261 Sechium edule HOM05D000141 ORTHO05D000780 2.1e-09 65.9 97 48.5
CiPaw.11G207600 Carya illinoinensis HOM05D000141 ORTHO05D000780 1.3e-08 63.2 65 60.0
Sp5g16450 Schrenkiella parvula HOM05D000141 ORTHO05D000780 1.7e-08 62.8 95 46.3
MELO3C013198.2 Cucumis melo HOM05D000141 ORTHO05D000780 1.5e-07 59.7 45 62.2
Thhalv10002379m.g Eutrema salsugineum HOM05D000141 ORTHO05D000780 4.3e-07 58.2 95 44.2
A01p26860 Brassica napus HOM05D000141 ORTHO05D000780 5.6e-07 57.8 89 46.1
BraA01t02616Z Brassica rapa HOM05D000141 ORTHO05D000780 5.6e-07 57.8 89 46.1
Lsat_1_v5_gn_5_2260 Lactuca sativa HOM05D000141 ORTHO05D000780 8.1e-06 53.9 88 44.3
Sc23g0006030 Simmondsia chinensis HOM05D000141 ORTHO05D000780 8.1e-06 53.9 58 53.4


User provided reference genes

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