Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv10361 Davidia involucrata HOM05D005351 ORTHO05D006542 1.6e-45 185.7 89 100.0
CSS0029070 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 4.8e-26 120.9 73 75.3
CSS0045517 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 4.8e-26 120.9 73 75.3
ClCG09G021540 Citrullus lanatus HOM05D005351 ORTHO05D006542 3.5e-24 114.8 73 69.9
COL.COLO4_07741 Corchorus olitorius HOM05D005351 ORTHO05D006542 4.5e-24 114.4 73 71.2
Rhsim04G0010500 Rhododendron simsii HOM05D005351 ORTHO05D006542 7.7e-24 113.6 78 67.9
Thecc.07G007900 Theobroma cacao HOM05D005351 ORTHO05D006542 3.8e-23 111.3 74 70.3
Cfa021891 Carpinus fangiana HOM05D005351 ORTHO05D006542 5.0e-23 110.9 73 68.5
CsaV3_7G023840 Cucumis sativus L. HOM05D005351 ORTHO05D006542 5.0e-23 110.9 73 69.9
Haze_09867 Corylus avellana HOM05D005351 ORTHO05D006542 6.5e-23 110.5 73 68.5
Duzib213G0009 Durio zibethinus HOM05D005351 ORTHO05D006542 6.5e-23 110.5 73 67.1
MBI14_g27041_MAGBIO Magnolia biondii HOM05D005351 ORTHO05D006542 6.5e-23 110.5 73 67.1
Actinidia03651 Actinidia chinensis HOM05D005351 ORTHO05D006542 1.5e-22 109.4 74 68.9
TAR626G0279 Trochodendron aralioides HOM05D005351 ORTHO05D006542 1.5e-22 109.4 73 68.5
CiPaw.12G140700 Carya illinoinensis HOM05D005351 ORTHO05D006542 1.9e-22 109.0 73 68.5
FAN11G1247 Fragaria x ananassa HOM05D005351 ORTHO05D006542 1.9e-22 109.0 73 65.8
FAN21G2745 Fragaria x ananassa HOM05D005351 ORTHO05D006542 1.9e-22 109.0 73 65.8
FAN25G1298 Fragaria x ananassa HOM05D005351 ORTHO05D006542 1.9e-22 109.0 73 65.8
Gohir.D05G384000 Gossypium hirsutum HOM05D005351 ORTHO05D006542 2.5e-22 108.6 73 67.1
Gorai.009G450800 Gossypium raimondii HOM05D005351 ORTHO05D006542 2.5e-22 108.6 73 67.1
DCAR_013254 Daucus carota HOM05D005351 ORTHO05D006542 5.5e-22 107.5 73 64.4
Cc05_g15290 Coffea canephora HOM05D005351 ORTHO05D006542 7.2e-22 107.1 73 63.0
Potri.001G371600 Populus trichocarpa HOM05D005351 ORTHO05D006542 7.2e-22 107.1 73 65.8
RcHm_v2.0_Chr5g0075571 Rosa chinensis HOM05D005351 ORTHO05D006542 7.2e-22 107.1 73 65.8
Eucgr.F02026 Eucalyptus grandis HOM05D005351 ORTHO05D006542 9.4e-22 106.7 73 69.9
FAN16G2746 Fragaria x ananassa HOM05D005351 ORTHO05D006542 1.2e-21 106.3 73 64.4
Manes.01G003500 Manihot esculenta HOM05D005351 ORTHO05D006542 6.1e-21 104.0 73 64.4
Sabra16G0244200 Salix brachista HOM05D005351 ORTHO05D006542 8.0e-21 103.6 73 63.0
PGR083G0334 Punica granatum HOM05D005351 ORTHO05D006542 1.0e-20 103.2 73 64.4
Nn1g02046 Nelumbo nucifera HOM05D005351 ORTHO05D006542 1.4e-20 102.8 73 64.4
Lalb_Chr15g0082311 Lupinus albus HOM05D005351 ORTHO05D006542 1.8e-20 102.4 73 63.0
Prupe.6G028400 Prunus persica HOM05D005351 ORTHO05D006542 2.3e-20 102.1 77 63.6
AUR62017130 Chenopodium quinoa HOM05D005351 ORTHO05D006542 3.0e-20 101.7 73 63.0
Phvul.006G059260 Phaseolus vulgaris HOM05D005351 ORTHO05D006542 6.8e-20 100.5 73 56.2
Nn3g19476 Nelumbo nucifera HOM05D005351 ORTHO05D006542 8.8e-20 100.1 73 61.6
PSO210G4843 Papaver somniferum HOM05D005351 ORTHO05D006542 8.8e-20 100.1 73 65.8
QL08p002685 Quercus lobata HOM05D005351 ORTHO05D006542 1.2e-19 99.8 73 65.8
Sed0019267 Sechium edule HOM05D005351 ORTHO05D006542 1.2e-19 99.8 77 63.6
TWI38G2212 Tripterygium wilfordii HOM05D005351 ORTHO05D006542 1.2e-19 99.8 74 60.8
MSTRG.15808 Avicennia marina HOM05D005351 ORTHO05D006542 2.0e-19 99.0 73 61.6
Gohir.A04G005700 Gossypium hirsutum HOM05D005351 ORTHO05D006542 2.0e-19 99.0 73 64.4
SGA_v2.0_scaffold168G38576 Striga asiatica HOM05D005351 ORTHO05D006542 2.0e-19 99.0 73 60.3
GSVIVG01014743001 Vitis vinifera HOM05D005351 ORTHO05D006542 2.0e-19 99.0 73 61.6
AUR62035679 Chenopodium quinoa HOM05D005351 ORTHO05D006542 2.6e-19 98.6 73 64.4
MD11G1037100 Malus domestica HOM05D005351 ORTHO05D006542 3.4e-19 98.2 77 62.3
Nitab4.5_0003328g0090 Nicotiana tabacum HOM05D005351 ORTHO05D006542 4.4e-19 97.8 72 63.9
PSO210G4950 Papaver somniferum HOM05D005351 ORTHO05D006542 4.4e-19 97.8 73 64.4
Hund23091 Selenicereus undatus HOM05D005351 ORTHO05D006542 4.4e-19 97.8 73 57.5
VMungo0540G1402 Vigna mungo HOM05D005351 ORTHO05D006542 4.4e-19 97.8 73 53.4
CAN.G492.50 Capsicum annuum HOM05D005351 ORTHO05D006542 5.7e-19 97.4 73 63.0
Glyma.08G332700 Glycine max HOM05D005351 ORTHO05D006542 5.7e-19 97.4 73 54.8
Glyma.18G074300 Glycine max HOM05D005351 ORTHO05D006542 5.7e-19 97.4 73 54.8
Oeu049420.1 Olea europaea HOM05D005351 ORTHO05D006542 7.5e-19 97.1 73 56.2
PSO782G2183 Papaver somniferum HOM05D005351 ORTHO05D006542 7.5e-19 97.1 73 63.0
PGSC0003DMG400014404 Solanum tuberosum HOM05D005351 ORTHO05D006542 9.8e-19 96.7 73 61.6
Lj8A180G96 Lonicera japonica HOM05D005351 ORTHO05D006542 1.3e-18 96.3 82 61.0
Nitab4.5_0005478g0030 Nicotiana tabacum HOM05D005351 ORTHO05D006542 1.7e-18 95.9 72 62.5
Lj6g0009098 Lotus japonicus HOM05D005351 ORTHO05D006542 3.7e-18 94.7 73 58.9
Peaxi162Scf00018g00155 Petunia axillaris HOM05D005351 ORTHO05D006542 3.7e-18 94.7 73 63.0
Aqoxy1G04296 Aquilegia oxysepala HOM05D005351 ORTHO05D006542 4.8e-18 94.4 75 56.0
MD03G1035400 Malus domestica HOM05D005351 ORTHO05D006542 4.8e-18 94.4 77 58.4
TWI38G1324 Tripterygium wilfordii HOM05D005351 ORTHO05D006542 6.3e-18 94.0 74 59.5
Ah.06g181500 Amaranthus hybridus HOM05D005351 ORTHO05D006542 1.1e-17 93.2 73 61.6
SalBow8G3039 Salvia bowleyana HOM05D005351 ORTHO05D006542 1.1e-17 93.2 73 57.5
HanXRQChr11g0334131 Helianthus annuus HOM05D005351 ORTHO05D006542 1.4e-17 92.8 74 58.1
Lsat_1_v5_gn_7_114900 Lactuca sativa HOM05D005351 ORTHO05D006542 1.8e-17 92.4 74 58.1
Oeu017994.1 Olea europaea HOM05D005351 ORTHO05D006542 1.8e-17 92.4 73 53.4
Solyc10g005850.4 Solanum lycopersicum HOM05D005351 ORTHO05D006542 3.1e-17 91.7 73 58.9
Sopen10g001810 Solanum pennellii HOM05D005351 ORTHO05D006542 3.1e-17 91.7 73 58.9
THA.LOC104815687 Tarenaya hassleriana HOM05D005351 ORTHO05D006542 4.1e-17 91.3 73 57.5
ATR0751G017 Amborella trichopoda HOM05D005351 ORTHO05D006542 5.4e-17 90.9 77 57.1
CDE05G2589 Ceratophyllum demersum HOM05D005351 ORTHO05D006542 9.1e-17 90.1 73 56.2
EL10Ac4g07541 Beta vulgaris HOM05D005351 ORTHO05D006542 1.2e-16 89.7 88 51.1
Ca_12455_v3 Cicer arietinum L. HOM05D005351 ORTHO05D006542 1.2e-16 89.7 74 55.4
SEGI_31992 Sequoiadendron giganteum HOM05D005351 ORTHO05D006542 1.2e-16 89.7 82 53.7
Psat5g166400 Pisum sativum HOM05D005351 ORTHO05D006542 3.5e-16 88.2 74 56.8
CANSAT11G0508 Cannabis sativa HOM05D005351 ORTHO05D006542 5.9e-16 87.4 97 48.5
Zm00001eb381020 Zea mays HOM05D005351 ORTHO05D006542 5.9e-16 87.4 77 55.8
Medtr3g461030 Medicago truncatula HOM05D005351 ORTHO05D006542 1.0e-15 86.7 76 55.3
unitig_0.g707 Utricularia gibba HOM05D005351 ORTHO05D006542 1.3e-15 86.3 73 53.4
TPR.G17956 Trifolium pratense HOM05D005351 ORTHO05D006542 2.3e-15 85.5 74 52.7
Os06g0298400 Oryza sativa ssp. japonica HOM05D005351 ORTHO05D006542 2.5e-14 82.0 77 54.5
AL3G25030 Arabidopsis lyrata HOM05D005351 ORTHO05D006542 3.3e-14 81.6 73 49.3
BcaB04g21006 Brassica carinata HOM05D005351 ORTHO05D006542 3.3e-14 81.6 73 47.9
BcaC09g48295 Brassica carinata HOM05D005351 ORTHO05D006542 5.5e-14 80.9 73 47.9
A01p40300 Brassica napus HOM05D005351 ORTHO05D006542 5.5e-14 80.9 73 47.9
C01p51820 Brassica napus HOM05D005351 ORTHO05D006542 5.5e-14 80.9 73 47.9
BolC1t05130H Brassica oleracea HOM05D005351 ORTHO05D006542 5.5e-14 80.9 73 47.9
BraA01t04066Z Brassica rapa HOM05D005351 ORTHO05D006542 5.5e-14 80.9 73 47.9
Migut.M01635 Erythranthe guttata HOM05D005351 ORTHO05D006542 1.6e-13 79.3 73 53.4
AT3G13225 Arabidopsis thaliana HOM05D005351 ORTHO05D006542 6.1e-13 77.4 73 46.6
ECA236G3149 Erigeron canadensis HOM05D005351 ORTHO05D006542 8.0e-13 77.0 64 50.0
Carub.0003s1261 Capsella rubella HOM05D005351 ORTHO05D006542 1.4e-12 76.3 73 47.9
CDE05G0998 Ceratophyllum demersum HOM05D005351 ORTHO05D006542 1.8e-12 75.9 64 54.7
Thhalv10020110m.g Eutrema salsugineum HOM05D005351 ORTHO05D006542 1.8e-12 75.9 73 46.6
Sp3g11430 Schrenkiella parvula HOM05D005351 ORTHO05D006542 2.3e-12 75.5 73 43.8
CARHR087840 Cardamine hirsuta HOM05D005351 ORTHO05D006542 1.2e-11 73.2 78 42.3
CBR_g12012 Chara braunii HOM05D005351 ORTHO05D006542 1.7e-10 69.3 88 43.2
AagrBONN_evm.TU.Sc2ySwM_368.1722__1723 Anthoceros agrestis HOM05D005351 ORTHO05D006542 3.7e-10 68.2 75 46.7
Sc03g0011530 Simmondsia chinensis HOM05D005351 ORTHO05D006542 5.4e-09 64.3 54 55.6
vmacro09623 Vaccinium macrocarpon HOM05D005351 ORTHO05D006542 9.2e-09 63.5 76 46.1
Hma1.2p1_0193F.1_g083920 Hydrangea macrophylla HOM05D005351 ORTHO05D006542 2.0e-08 62.4 45 64.4
SMO164G0196 Selaginella moellendorffii HOM05D005351 ORTHO05D006542 1.3e-07 59.7 67 44.8
vmacro11082 Vaccinium macrocarpon HOM05D000009 ORTHO05D006542 2.9e-07 58.5 55 52.7
Pp3c7_8580 Physcomitrium patens HOM05D005351 ORTHO05D006542 3.9e-07 58.2 91 37.4
Cpa.g.sc12.108 Carica papaya HOM05D005351 ORTHO05D006542 7.3e-06 53.9 53 49.1
Cre09.g388430 Chlamydomonas reinhardtii HOM05D005351 ORTHO05D006542 9.5e-06 53.5 43 51.2


User provided reference genes

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