Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv10356 Davidia involucrata HOM05D007278 ORTHO05D009280 1.0e-247 859.8 466 100.0
GSVIVG01014732001 Vitis vinifera HOM05D007278 ORTHO05D009280 1.4e-148 530.4 459 66.2
Actinidia03626 Actinidia chinensis HOM05D007278 ORTHO05D009280 2.4e-145 519.6 462 64.5
Rhsim04G0010900 Rhododendron simsii HOM05D007278 ORTHO05D009280 5.6e-142 508.4 464 63.6
TAR626G0410 Trochodendron aralioides HOM05D007278 ORTHO05D009280 1.2e-139 500.7 461 64.6
CiPaw.11G206100 Carya illinoinensis HOM05D007278 ORTHO05D009280 7.6e-139 498.0 466 62.0
Cfa016926 Carpinus fangiana HOM05D007278 ORTHO05D009280 2.7e-136 489.6 459 63.4
Haze_09857 Corylus avellana HOM05D007278 ORTHO05D009280 1.3e-135 487.3 459 62.5
Hma1.2p1_1094F.1_g256380 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 6.7e-135 485.0 461 66.6
CSS0042987 Camellia sinensis var. sinensis HOM05D007278 ORTHO05D009280 8.7e-135 484.6 458 62.9
vmacro09628 Vaccinium macrocarpon HOM05D007278 ORTHO05D009280 2.1e-133 479.9 462 61.0
QL08p003254 Quercus lobata HOM05D007278 ORTHO05D009280 7.2e-129 464.9 465 59.8
Lj8A180T100 Lonicera japonica HOM05D007278 ORTHO05D009280 5.7e-126 455.3 459 60.3
Duzib213G0397 Durio zibethinus HOM05D007278 ORTHO05D009280 2.8e-117 426.4 461 56.6
Atru.chr2.3762 Acer truncatum HOM05D007278 ORTHO05D009280 6.9e-116 421.8 463 56.2
Atru.chr2.3748 Acer truncatum HOM05D007278 ORTHO05D009280 2.5e-113 413.3 463 55.9
Prupe.6G026900 Prunus persica HOM05D007278 ORTHO05D009280 2.3e-111 406.8 465 53.5
Ciclev10010817m.g Citrus clementina HOM05D007278 ORTHO05D009280 5.1e-111 405.6 458 53.7
Nn7g37466 Nelumbo nucifera HOM05D007278 ORTHO05D009280 1.7e-109 400.6 454 54.4
Gorai.013G150800 Gossypium raimondii HOM05D007278 ORTHO05D009280 4.8e-109 399.1 457 55.1
Gohir.D13G134500 Gossypium hirsutum HOM05D007278 ORTHO05D009280 1.6e-107 394.0 457 54.9
Gohir.A13G131200 Gossypium hirsutum HOM05D007278 ORTHO05D009280 7.2e-105 385.2 457 53.2
Thecc.07G008600 Theobroma cacao HOM05D007278 ORTHO05D009280 9.4e-105 384.8 433 55.0
MD11G1036100 Malus domestica HOM05D007278 ORTHO05D009280 8.0e-104 381.7 457 52.1
TWI38G0395 Tripterygium wilfordii HOM05D007278 ORTHO05D009280 2.3e-103 380.2 459 52.7
Sabra16G0243500 Salix brachista HOM05D007278 ORTHO05D009280 3.3e-102 376.3 461 52.7
Potri.001G370700 Populus trichocarpa HOM05D007278 ORTHO05D009280 7.5e-102 375.2 457 54.3
COL.COLO4_07734 Corchorus olitorius HOM05D007278 ORTHO05D009280 8.5e-98 361.7 461 50.8
PGR031G2600 Punica granatum HOM05D007278 ORTHO05D009280 7.0e-92 342.0 457 48.6
FvH4_3g42411 Fragaria vesca HOM05D007278 ORTHO05D009280 3.5e-91 339.7 459 48.6
FAN11G3173 Fragaria x ananassa HOM05D007278 ORTHO05D009280 1.5e-89 334.3 459 48.1
FAN28G1934 Fragaria x ananassa HOM05D007278 ORTHO05D009280 3.2e-89 333.2 459 47.9
THA.LOC104822724 Tarenaya hassleriana HOM05D007278 ORTHO05D009280 5.5e-89 332.4 461 48.8
EL10Ac4g07533 Beta vulgaris HOM05D007278 ORTHO05D009280 1.2e-88 331.3 462 47.6
FAN21G2048 Fragaria x ananassa HOM05D007278 ORTHO05D009280 2.7e-88 330.1 459 47.7
PSO210G1309 Papaver somniferum HOM05D007278 ORTHO05D009280 1.0e-87 328.2 460 47.2
HanXRQChr11g0334411 Helianthus annuus HOM05D007278 ORTHO05D009280 4.0e-87 326.2 457 45.7
Sed0005179 Sechium edule HOM05D007278 ORTHO05D009280 6.8e-87 325.5 454 46.9
Solyc07g065760.3 Solanum lycopersicum HOM05D007278 ORTHO05D009280 2.0e-86 323.9 469 47.3
CAN.G623.31 Capsicum annuum HOM05D007278 ORTHO05D009280 2.6e-86 323.6 457 46.6
ATR0751G235 Amborella trichopoda HOM05D007278 ORTHO05D009280 1.7e-85 320.9 473 44.2
Sopen07g033970 Solanum pennellii HOM05D007278 ORTHO05D009280 1.7e-85 320.9 469 47.3
Lj6g0007693 Lotus japonicus HOM05D007278 ORTHO05D009280 8.3e-85 318.5 373 53.6
Peaxi162Scf00139g00103 Petunia axillaris HOM05D007278 ORTHO05D009280 1.1e-84 318.2 463 47.3
PGSC0003DMG400022161 Solanum tuberosum HOM05D007278 ORTHO05D009280 2.4e-84 317.0 466 45.5
ClCG10G004340 Citrullus lanatus HOM05D007278 ORTHO05D009280 4.1e-84 316.2 458 46.1
Cpa.g.sc12.134 Carica papaya HOM05D007278 ORTHO05D009280 1.2e-83 314.7 288 63.9
FAN16G1801 Fragaria x ananassa HOM05D007278 ORTHO05D009280 4.5e-83 312.8 444 46.8
Nitab4.5_0010643g0030 Nicotiana tabacum HOM05D007278 ORTHO05D009280 3.8e-82 309.7 466 45.3
CANSAT11G0150 Cannabis sativa HOM05D007278 ORTHO05D009280 8.6e-82 308.5 461 45.8
Nitab4.5_0000152g0330 Nicotiana tabacum HOM05D007278 ORTHO05D009280 8.6e-82 308.5 460 46.5
AUR62035670 Chenopodium quinoa HOM05D007278 ORTHO05D009280 1.9e-81 307.4 465 45.8
Migut.M01628 Erythranthe guttata HOM05D007278 ORTHO05D009280 2.5e-81 307.0 459 44.0
SalBow8G0571 Salvia bowleyana HOM05D007278 ORTHO05D009280 4.7e-80 302.8 458 45.6
SalBow8G0318 Salvia bowleyana HOM05D007278 ORTHO05D009280 8.0e-80 302.0 458 45.6
MD03G1032400 Malus domestica HOM05D007278 ORTHO05D009280 1.8e-79 300.8 255 66.7
RcHm_v2.0_Chr5g0075911 Rosa chinensis HOM05D007278 ORTHO05D009280 1.8e-79 300.8 459 44.7
Oeu005473.1 Olea europaea HOM05D007278 ORTHO05D009280 3.0e-79 300.1 443 46.3
Eucgr.F03677 Eucalyptus grandis HOM05D007278 ORTHO05D009280 7.5e-78 295.4 277 63.2
Carub.0001s4440 Capsella rubella HOM05D007278 ORTHO05D009280 1.3e-77 294.7 461 41.6
Phvul.006G059206 Phaseolus vulgaris HOM05D007278 ORTHO05D009280 1.7e-77 294.3 334 53.6
MELO3C014108.2 Cucumis melo HOM05D007278 ORTHO05D009280 2.9e-77 293.5 461 44.0
AUR62017137 Chenopodium quinoa HOM05D007278 ORTHO05D009280 1.8e-76 290.8 455 44.8
Ca_12446_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 4.1e-76 289.7 316 54.7
Cc05_g15160 Coffea canephora HOM05D007278 ORTHO05D009280 7.0e-76 288.9 463 43.8
Sp1g41410 Schrenkiella parvula HOM05D007278 ORTHO05D009280 1.6e-75 287.7 459 42.3
VMungo0540G0529 Vigna mungo HOM05D007278 ORTHO05D009280 2.0e-75 287.3 334 52.7
AL1G63950 Arabidopsis lyrata HOM05D007278 ORTHO05D009280 5.9e-75 285.8 456 41.9
Glyma.18G074900 Glycine max HOM05D007278 ORTHO05D009280 1.0e-74 285.0 318 55.3
Aa31LG10G360 Aethionema arabicum HOM05D007278 ORTHO05D009280 6.6e-74 282.3 459 42.5
Manes.15G057600 Manihot esculenta HOM05D007278 ORTHO05D009280 8.6e-74 282.0 380 49.5
Lalb_Chr20g0114071 Lupinus albus HOM05D007278 ORTHO05D009280 1.5e-73 281.2 372 47.3
Hund23054 Selenicereus undatus HOM05D007278 ORTHO05D000105 1.5e-73 281.2 360 51.4
AT1G55830 Arabidopsis thaliana HOM05D007278 ORTHO05D009280 1.9e-73 280.8 461 42.1
Thhalv10011545m.g Eutrema salsugineum HOM05D007278 ORTHO05D009280 3.3e-73 280.0 459 42.3
TPR.G17958 Trifolium pratense HOM05D007278 ORTHO05D009280 4.3e-73 279.6 320 53.4
ECA236G2022 Erigeron canadensis HOM05D007278 ORTHO05D009280 5.6e-73 279.3 462 43.7
Aqoxy1G02222 Aquilegia oxysepala HOM05D007278 ORTHO05D009280 2.1e-72 277.3 339 50.1
Ca_14732_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 2.8e-72 276.9 245 62.4
CsaV3_3G004120 Cucumis sativus L. HOM05D007278 ORTHO05D009280 4.7e-72 276.2 309 53.4
CARHR045530 Cardamine hirsuta HOM05D007278 ORTHO05D009280 2.3e-71 273.9 468 41.0
Lsat_1_v5_gn_7_114160 Lactuca sativa HOM05D007278 ORTHO05D009280 2.3e-71 273.9 322 53.1
BcaB07g33186 Brassica carinata HOM05D007278 ORTHO05D009280 2.6e-70 270.4 465 41.5
BcaC08g43656 Brassica carinata HOM05D007278 ORTHO05D009280 2.3e-63 247.3 457 39.8
C06p10730 Brassica napus HOM05D007278 ORTHO05D009280 2.3e-63 247.3 457 39.8
BraSC56t46403Z Brassica rapa HOM05D007278 ORTHO05D009280 2.3e-63 247.3 463 38.4
SEGI_11808 Sequoiadendron giganteum HOM05D007278 ORTHO05D009280 4.9e-61 239.6 281 47.3
BolC6t36159H Brassica oleracea HOM05D007278 ORTHO05D009280 7.1e-60 235.7 447 39.6
CDE10G0141 Ceratophyllum demersum HOM05D007278 ORTHO05D009280 1.6e-56 224.6 464 37.7
MD03G1032000 Malus domestica HOM05D007278 ORTHO05D009280 6.4e-53 212.6 146 76.7
arahy.Tifrunner.gnm1.ann1.BC78PS Arachis hypogaea HOM05D007278 ORTHO05D009280 1.1e-52 211.8 349 43.3
arahy.Tifrunner.gnm1.ann1.E9ZV4R Arachis hypogaea HOM05D007278 ORTHO05D009280 1.2e-51 208.4 349 42.7
Psat5g165280 Pisum sativum HOM05D007278 ORTHO05D009280 2.7e-51 207.2 280 50.4
Pp3c7_290 Physcomitrium patens HOM05D007278 ORTHO05D009280 1.6e-43 181.4 314 37.6
AagrBONN_evm.TU.Sc2ySwM_344.4166 Anthoceros agrestis HOM05D007278 ORTHO05D009280 1.5e-41 174.9 297 38.4
Mapoly0076s0093 Marchantia polymorpha HOM05D007278 ORTHO05D009280 1.3e-40 171.8 305 37.0
HPP92_028502 Vanilla planifolia HOM05D007278 ORTHO05D009280 1.1e-31 142.1 383 32.6
Hma1.2p1_0604F.1_g187790 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 5.8e-22 109.8 81 71.6
Hma1.2p1_0292F.1_g115510 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 4.3e-17 93.6 66 71.2
BraA06t23216Z Brassica rapa HOM05D007278 ORTHO05D009280 3.7e-16 90.5 169 41.4
Ah.09g234860 Amaranthus hybridus HOM05D007278 ORTHO05D009280 2.2e-13 81.3 313 31.3
HPP92_017878 Vanilla planifolia HOM05D007278 ORTHO05D009280 4.6e-11 73.6 59 67.8
Thecc.07G008800 Theobroma cacao HOM05D007278 ORTHO05D009280 1.5e-09 68.6 75 56.0
Oeu039420.1 Olea europaea HOM05D003885 ORTHO05D004623 1.5e-06 58.5 219 31.5


User provided reference genes

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