Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv10326 Davidia involucrata HOM05D005849 ORTHO05D004704 2.1e-121 439.1 237 100.0
Potri.001G367100 Populus trichocarpa HOM05D005849 ORTHO05D004704 8.3e-25 118.2 222 40.5
CiPaw.12G137700 Carya illinoinensis HOM05D005849 ORTHO05D004704 2.4e-24 116.7 253 41.1
QL08p004345 Quercus lobata HOM05D005849 ORTHO05D004704 4.1e-24 115.9 231 41.1
QL11p054311 Quercus lobata HOM05D005849 ORTHO05D004704 4.1e-24 115.9 231 41.1
Manes.03G140566 Manihot esculenta HOM05D005849 ORTHO05D004704 9.2e-24 114.8 228 38.2
Manes.03G140700 Manihot esculenta HOM05D005849 ORTHO05D004704 3.5e-23 112.8 223 39.5
Manes.15G060700 Manihot esculenta HOM05D005849 ORTHO05D004704 7.8e-23 111.7 233 40.3
Sabra16G0240400 Salix brachista HOM05D005849 ORTHO05D004704 5.6e-21 105.5 217 38.2
CiPaw.11G203200 Carya illinoinensis HOM05D005849 ORTHO05D004704 2.4e-19 100.1 231 36.8
Haze_09816 Corylus avellana HOM05D005849 ORTHO05D004704 3.4e-18 96.3 135 48.1
TAR629G2911 Trochodendron aralioides HOM05D005849 ORTHO05D004704 2.2e-17 93.6 200 38.0
TWI38G0138 Tripterygium wilfordii HOM05D005849 ORTHO05D004704 2.9e-17 93.2 212 40.1
Cfa020199 Carpinus fangiana HOM05D005849 ORTHO05D004704 1.4e-16 90.9 220 40.5
Thecc.01G196200 Theobroma cacao HOM05D005849 ORTHO05D004704 9.3e-16 88.2 147 43.5
Lj8P178T38 Lonicera japonica HOM05D005849 ORTHO05D004704 1.9e-13 80.5 103 55.3
Nn1g03187 Nelumbo nucifera HOM05D005849 ORTHO05D004704 4.3e-13 79.3 241 32.8
Aqoxy4G02338 Aquilegia oxysepala HOM05D005849 ORTHO05D004704 9.6e-13 78.2 230 33.0
Gohir.A01G091100 Gossypium hirsutum HOM05D005849 ORTHO05D004704 1.3e-12 77.8 220 33.6
Prupe.4G242400 Prunus persica HOM05D005849 ORTHO05D004704 1.3e-12 77.8 129 42.6
Ciclev10009298m.g Citrus clementina HOM05D005849 ORTHO05D004704 1.6e-12 77.4 232 32.3
Dinv26604 Davidia involucrata HOM05D005849 ORTHO05D004704 3.6e-12 76.3 234 32.9
TAR629G2787 Trochodendron aralioides HOM05D005849 ORTHO05D004704 4.8e-12 75.9 145 38.6
Duzib138G1177 Durio zibethinus HOM05D005849 ORTHO05D004704 8.1e-12 75.1 213 33.3
QL04p068477 Quercus lobata HOM05D005849 ORTHO05D004704 8.1e-12 75.1 223 34.1
Gohir.A07G192100 Gossypium hirsutum HOM05D005849 ORTHO05D004704 1.8e-11 73.9 204 36.8
Gohir.D07G198400 Gossypium hirsutum HOM05D005849 ORTHO05D004704 2.4e-11 73.6 205 37.6
Phvul.006G056700 Phaseolus vulgaris HOM05D005849 ORTHO05D004704 2.4e-11 73.6 232 31.0
Duzib133G0645 Durio zibethinus HOM05D005849 ORTHO05D004704 3.1e-11 73.2 223 34.5
Gorai.001G222200 Gossypium raimondii HOM05D005849 ORTHO05D004704 3.1e-11 73.2 205 37.6
PSO541G2883 Papaver somniferum HOM05D005849 ORTHO05D004704 5.3e-11 72.4 221 34.4
Gorai.002G099600 Gossypium raimondii HOM05D005849 ORTHO05D004704 9.0e-11 71.6 220 32.7
PSO675G3647 Papaver somniferum HOM05D005849 ORTHO05D004704 1.5e-10 70.9 234 34.6
Duzib213G0789 Durio zibethinus HOM05D005849 ORTHO05D004704 2.0e-10 70.5 244 33.6
arahy.Tifrunner.gnm1.ann1.UTL0P7 Arachis hypogaea HOM05D005849 ORTHO05D004704 2.6e-10 70.1 189 38.6
Medtr3g058930 Medicago truncatula HOM05D014115 ORTHO05D004704 3.4e-10 69.7 65 56.9
Gorai.001G191400 Gossypium raimondii HOM05D005849 ORTHO05D004704 4.4e-10 69.3 206 35.9
COL.COLO4_19617 Corchorus olitorius HOM05D005849 ORTHO05D004704 5.8e-10 68.9 231 33.3
Lj8P136T22 Lonicera japonica HOM05D005849 ORTHO05D004704 1.7e-09 67.4 217 34.6
Oeu049391.1 Olea europaea HOM05D005849 ORTHO05D004704 2.2e-09 67.0 211 34.6
Glyma.08G329000 Glycine max HOM05D005849 ORTHO05D004704 4.9e-09 65.9 215 35.8
Gohir.A07G169800 Gossypium hirsutum HOM05D005849 ORTHO05D004704 4.9e-09 65.9 203 35.5
Gohir.D07G171100 Gossypium hirsutum HOM05D005849 ORTHO05D004704 4.9e-09 65.9 206 35.0
Nn1g07503 Nelumbo nucifera HOM05D005849 ORTHO05D004704 6.4e-09 65.5 117 40.2
arahy.Tifrunner.gnm1.ann1.715EVP Arachis hypogaea HOM05D005849 ORTHO05D004704 8.4e-09 65.1 198 36.4
Gohir.D01G076400 Gossypium hirsutum HOM05D005849 ORTHO05D004704 8.4e-09 65.1 106 41.5
CANSAT11G2057 Cannabis sativa HOM05D005849 ORTHO05D004704 1.1e-08 64.7 222 31.5
Cpa.g.sc12.153 Carica papaya HOM05D005849 ORTHO05D004704 1.4e-08 64.3 242 31.4
Lj6g0007370 Lotus japonicus HOM05D005849 ORTHO05D004704 1.4e-08 64.3 227 33.5
Prupe.3G197400 Prunus persica HOM05D005849 ORTHO05D004704 1.4e-08 64.3 209 32.1
Thecc.07G014700 Theobroma cacao HOM05D005849 ORTHO05D004704 1.4e-08 64.3 230 34.8
MD17G1117100 Malus domestica HOM05D005849 ORTHO05D004704 7.1e-08 62.0 119 39.5
Cpa.g.sc136.30 Carica papaya HOM05D005849 ORTHO05D004704 1.2e-07 61.2 164 36.0
Cfa014225 Carpinus fangiana HOM05D005849 ORTHO05D004704 2.1e-07 60.5 205 32.7
Sabra14G0127500 Salix brachista HOM05D005849 ORTHO05D004704 2.7e-07 60.1 221 31.2
VMungo0540G1302 Vigna mungo HOM05D005849 ORTHO05D004704 2.7e-07 60.1 258 29.5
Haze_12628 Corylus avellana HOM05D005849 ORTHO05D004704 3.5e-07 59.7 204 31.9
Psat5g169040 Pisum sativum HOM05D014115 ORTHO05D004704 3.5e-07 59.7 67 50.7
Rhsim06G0176600 Rhododendron simsii HOM05D005849 ORTHO05D004704 4.6e-07 59.3 205 30.2
TWI36G1699 Tripterygium wilfordii HOM05D005849 ORTHO05D004704 4.6e-07 59.3 242 30.2
Glyma.02G300100 Glycine max HOM05D014115 ORTHO05D004704 6.0e-07 58.9 229 29.7
Glyma.14G013800 Glycine max HOM05D014115 ORTHO05D004704 6.0e-07 58.9 229 30.1
Lalb_Chr15g0082031 Lupinus albus HOM05D005849 ORTHO05D004704 6.0e-07 58.9 113 40.7
TPR.G35467 Trifolium pratense HOM05D014115 ORTHO05D004704 7.9e-07 58.5 66 53.0
Glyma.18G077800 Glycine max HOM05D014115 ORTHO05D004704 1.0e-06 58.2 242 31.8
MBI19_g14891_MAGBIO Magnolia biondii HOM05D005849 ORTHO05D004704 1.3e-06 57.8 67 50.7
MD09G1126800 Malus domestica HOM05D005849 ORTHO05D004704 1.3e-06 57.8 215 32.1
Medtr5g095710 Medicago truncatula HOM05D014115 ORTHO05D004704 1.7e-06 57.4 67 49.3
Potri.014G167700 Populus trichocarpa HOM05D005849 ORTHO05D004704 3.0e-06 56.6 247 28.7
Cc03_g07410 Coffea canephora HOM05D005849 ORTHO05D004704 6.6e-06 55.5 118 39.0


User provided reference genes

Program Settings