Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv10312 Davidia involucrata HOM05D007550 ORTHO05D009474 3.7e-73 278.1 139 100.0
TAR626G1551 Trochodendron aralioides HOM05D007550 ORTHO05D009474 2.9e-41 172.2 137 63.5
Actinidia39070 Actinidia chinensis HOM05D007550 ORTHO05D009474 3.2e-40 168.7 133 66.2
GSVIVG01037778001 Vitis vinifera HOM05D007550 ORTHO05D009474 1.1e-37 160.2 90 83.3
TWI38G1227 Tripterygium wilfordii HOM05D007550 ORTHO05D009474 4.3e-37 158.3 139 62.6
Lj1A885G31 Lonicera japonica HOM05D007550 ORTHO05D009474 9.5e-37 157.1 124 65.3
CiPaw.12G135900 Carya illinoinensis HOM05D007550 ORTHO05D009474 8.1e-36 154.1 109 73.4
Manes.15G063300 Manihot esculenta HOM05D007550 ORTHO05D009474 8.1e-36 154.1 126 64.3
Nn1g07439 Nelumbo nucifera HOM05D007550 ORTHO05D009474 1.4e-35 153.3 134 62.7
QL08p005510 Quercus lobata HOM05D007550 ORTHO05D009474 1.4e-35 153.3 135 58.5
Sc18g0004240 Simmondsia chinensis HOM05D007550 ORTHO05D009474 1.5e-34 149.8 142 58.5
Thecc.07G022400 Theobroma cacao HOM05D007550 ORTHO05D009474 3.4e-34 148.7 120 61.7
Atru.chr2.3607 Acer truncatum HOM05D007550 ORTHO05D009474 7.5e-34 147.5 139 56.1
Hma1.2p1_0036F.1_g022730 Hydrangea macrophylla HOM05D007550 ORTHO05D009474 1.7e-33 146.4 80 86.2
ATR1149G080 Amborella trichopoda HOM05D007550 ORTHO05D009474 8.3e-33 144.1 106 67.0
Gorai.002G096500 Gossypium raimondii HOM05D007550 ORTHO05D009474 1.1e-32 143.7 117 61.5
Peaxi162Scf00955g00219 Petunia axillaris HOM05D007550 ORTHO05D009474 1.4e-32 143.3 134 56.7
PGSC0003DMG400029800 Solanum tuberosum HOM05D007550 ORTHO05D009474 1.9e-32 142.9 95 70.5
Medtr5g094600 Medicago truncatula HOM05D007550 ORTHO05D009474 3.2e-32 142.1 98 68.4
Solyc12g015630.2 Solanum lycopersicum HOM05D007550 ORTHO05D009474 3.2e-32 142.1 88 76.1
Duzib213G0332 Durio zibethinus HOM05D007550 ORTHO05D009474 4.1e-32 141.7 119 61.3
Sed0001315 Sechium edule HOM05D007550 ORTHO05D009474 5.4e-32 141.4 83 79.5
CDE06G2160 Ceratophyllum demersum HOM05D007550 ORTHO05D009474 7.1e-32 141.0 92 71.7
A10p12800 Brassica napus HOM05D007550 ORTHO05D009474 9.2e-32 140.6 135 54.1
BraA10t43373Z Brassica rapa HOM05D007550 ORTHO05D009474 9.2e-32 140.6 135 54.1
Gohir.A01G087300 Gossypium hirsutum HOM05D007550 ORTHO05D009474 1.2e-31 140.2 117 60.7
Sabra02G0058600 Salix brachista HOM05D007550 ORTHO05D009474 1.6e-31 139.8 78 83.3
Psat2g008720 Pisum sativum HOM05D007550 ORTHO05D009474 4.6e-31 138.3 116 59.5
Migut.M01677 Erythranthe guttata HOM05D007550 ORTHO05D009474 6.0e-31 137.9 97 70.1
MELO3C014132.2 Cucumis melo HOM05D007550 ORTHO05D009474 7.8e-31 137.5 95 72.6
Aa31LG3G11520 Aethionema arabicum HOM05D007550 ORTHO05D009474 1.3e-30 136.7 140 52.9
C09p46340 Brassica napus HOM05D007550 ORTHO05D009474 1.3e-30 136.7 135 53.3
THA.LOC104817699 Tarenaya hassleriana HOM05D007550 ORTHO05D009474 1.3e-30 136.7 123 57.7
CAN.G410.43 Capsicum annuum HOM05D007550 ORTHO05D009474 1.7e-30 136.3 95 66.3
LjContig00272g0022958 Lotus japonicus HOM05D007550 ORTHO05D009474 1.7e-30 136.3 143 55.2
Sopen12g007530 Solanum pennellii HOM05D007550 ORTHO05D009474 2.3e-30 136.0 88 75.0
BolC9t57498H Brassica oleracea HOM05D007550 ORTHO05D009474 3.9e-30 135.2 135 52.6
RcHm_v2.0_Chr5g0042631 Rosa chinensis HOM05D007550 ORTHO05D009474 3.9e-30 135.2 76 78.9
MSTRG.6984 Avicennia marina HOM05D007550 ORTHO05D009474 6.6e-30 134.4 114 63.2
FvH4_3g24050 Fragaria vesca HOM05D007550 ORTHO05D009474 1.1e-29 133.7 76 77.6
AT5G55570 Arabidopsis thaliana HOM05D007550 ORTHO05D009474 1.5e-29 133.3 96 61.5
Thhalv10014968m.g Eutrema salsugineum HOM05D007550 ORTHO05D009474 1.5e-29 133.3 141 52.5
MD11G1204800 Malus domestica HOM05D007550 ORTHO05D009474 1.5e-29 133.3 88 73.9
FAN11G2859 Fragaria x ananassa HOM05D007550 ORTHO05D009474 4.3e-29 131.7 102 60.8
HPP92_028367 Vanilla planifolia HOM05D007550 ORTHO05D009474 4.3e-29 131.7 89 69.7
Zm00001eb370450 Zea mays HOM05D007550 ORTHO05D009474 4.3e-29 131.7 94 66.0
CsaV3_3G004390 Cucumis sativus L. HOM05D007550 ORTHO05D009474 5.6e-29 131.3 95 69.5
FAN16G0277 Fragaria x ananassa HOM05D007550 ORTHO05D009474 5.6e-29 131.3 80 73.8
Phvul.008G275600 Phaseolus vulgaris HOM05D007550 ORTHO05D009474 7.3e-29 131.0 144 52.8
AL8G31140 Arabidopsis lyrata HOM05D007550 ORTHO05D009474 9.5e-29 130.6 142 50.7
CARHR268880 Cardamine hirsuta HOM05D007550 ORTHO05D009474 9.5e-29 130.6 103 57.3
ECA240G1453 Erigeron canadensis HOM05D007550 ORTHO05D009474 9.5e-29 130.6 87 71.3
Lalb_Chr17g0348791 Lupinus albus HOM05D007550 ORTHO05D009474 1.2e-28 130.2 125 54.4
Os01g0762300 Oryza sativa ssp. japonica HOM05D007550 ORTHO05D009474 1.6e-28 129.8 71 77.5
HanXRQChr13g0408011 Helianthus annuus HOM05D007550 ORTHO05D009474 2.1e-28 129.4 76 76.3
Nitab4.5_0000163g0330 Nicotiana tabacum HOM05D007550 ORTHO05D009474 2.8e-28 129.0 82 76.8
Nitab4.5_0001750g0040 Nicotiana tabacum HOM05D007550 ORTHO05D009474 2.8e-28 129.0 83 75.9
COL.COLO4_09786 Corchorus olitorius HOM05D007550 ORTHO05D009474 3.6e-28 128.6 124 52.4
Cc05_g14670 Coffea canephora HOM05D007550 ORTHO05D009474 6.2e-28 127.9 90 68.9
DCAR_022604 Daucus carota HOM05D007550 ORTHO05D009474 7.6e-26 120.9 150 50.7
Oeu005969.1 Olea europaea HOM05D007550 ORTHO05D009474 9.9e-26 120.6 133 53.4
Aqoxy4G02213 Aquilegia oxysepala HOM05D007550 ORTHO05D009474 2.2e-25 119.4 141 51.1
Ciclev10009869m.g Citrus clementina HOM05D007550 ORTHO05D009474 2.2e-25 119.4 124 52.4
Mapoly0128s0022 Marchantia polymorpha HOM05D007550 ORTHO05D009474 2.2e-25 119.4 90 62.2
Hma1.2p1_0036F.1_g022720 Hydrangea macrophylla HOM05D007550 ORTHO05D009474 2.9e-25 119.0 151 53.6
AagrBONN_evm.TU.Sc2ySwM_344.2781 Anthoceros agrestis HOM05D007550 ORTHO05D009474 3.7e-25 118.6 79 65.8
Cfa020230 Carpinus fangiana HOM05D007550 ORTHO05D009474 4.9e-25 118.2 121 55.4
Potri.011G085501 Populus trichocarpa HOM05D007550 ORTHO05D009474 4.9e-25 118.2 115 57.4
CBR_g30607 Chara braunii HOM05D007550 ORTHO05D009474 8.4e-25 117.5 71 71.8
arahy.Tifrunner.gnm1.ann1.S0MYI4 Arachis hypogaea HOM05D007550 ORTHO05D009474 1.1e-24 117.1 109 54.1
arahy.Tifrunner.gnm1.ann1.R7ZLS4 Arachis hypogaea HOM05D007550 ORTHO05D009474 1.4e-24 116.7 109 53.2
PGR031G0516 Punica granatum HOM05D007550 ORTHO05D009474 3.2e-24 115.5 125 54.4
ClCG10G004590 Citrullus lanatus HOM05D007550 ORTHO05D009474 2.7e-23 112.5 79 73.4
BcaB08g35917 Brassica carinata HOM05D007550 ORTHO05D009474 1.3e-22 110.2 135 46.7
Gohir.D01G073600 Gossypium hirsutum HOM05D007550 ORTHO05D009474 1.7e-22 109.8 102 56.9
EL10Ac4g07615 Beta vulgaris HOM05D007550 ORTHO05D009474 1.9e-21 106.3 140 43.6
VMungo0647G1572 Vigna mungo HOM05D007550 ORTHO05D009474 1.9e-21 106.3 96 53.1
FAN21G0016 Fragaria x ananassa HOM05D007550 ORTHO05D009474 3.3e-21 105.5 68 72.1
FAN25G3253 Fragaria x ananassa HOM05D007550 ORTHO05D009474 5.6e-21 104.8 77 67.5
FAN25G1734 Fragaria x ananassa HOM05D007550 ORTHO05D009474 7.3e-21 104.4 91 57.1
Glyma.14G015900 Glycine max HOM05D007550 ORTHO05D009474 9.6e-21 104.0 126 50.0
Carub.0008s1594 Capsella rubella HOM05D007550 ORTHO05D009474 2.1e-20 102.8 122 46.7
PSO541G5298 Papaver somniferum HOM05D007550 ORTHO05D009474 2.8e-20 102.4 123 47.2
PSO675G9283 Papaver somniferum HOM05D007550 ORTHO05D009474 2.8e-20 102.4 123 47.2
unitig_899.g15275 Utricularia gibba HOM05D007550 ORTHO05D009474 1.1e-19 100.5 61 77.0
vmacro09669 Vaccinium macrocarpon HOM05D007550 ORTHO05D009474 1.5e-18 96.7 98 62.2
CANSAT56G0742 Cannabis sativa HOM05D007550 ORTHO05D009474 1.9e-16 89.7 117 50.4
Cre03.g145567 Chlamydomonas reinhardtii HOM05D007550 ORTHO05D009474 4.2e-16 88.6 78 52.6
Pp3c18_5680 Physcomitrium patens HOM05D007550 ORTHO05D009474 9.3e-16 87.4 75 58.7
SGA_v2.0_scaffold168G38530 Striga asiatica HOM05D007550 ORTHO05D009474 1.0e-14 84.0 89 50.6
PRCOL_00004706 Prasinoderma coloniale HOM05D007550 ORTHO05D009474 3.0e-14 82.4 72 56.9
MBI16_g11565_MAGBIO Magnolia biondii HOM05D007550 ORTHO05D009474 4.0e-11 72.0 92 50.0
CSS0047920 Camellia sinensis var. sinensis HOM05D054735 ORTHO05D009474 4.9e-09 65.1 67 55.2
CSS0028012 Camellia sinensis var. sinensis HOM05D054735 ORTHO05D009474 8.4e-09 64.3 62 59.7
Potri.011G085700 Populus trichocarpa HOM05D007550 ORTHO05D009474 1.4e-08 63.5 87 48.3
Prupe.4G233900 Prunus persica HOM05D007550 ORTHO05D009474 2.4e-08 62.8 85 45.9
Hund01919 Selenicereus undatus HOM05D007550 ORTHO05D009474 4.2e-08 62.0 68 51.5
Sp6g17490 Schrenkiella parvula HOM05D007550 ORTHO05D009474 1.6e-07 60.1 61 50.8
MBI16_g11563_MAGBIO Magnolia biondii HOM05D007550 ORTHO05D009474 2.1e-07 59.7 32 78.1
Ah.06g181190 Amaranthus hybridus HOM05D000063 ORTHO05D000906 4.6e-07 58.5 36 69.4


User provided reference genes

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