Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv10299 Davidia involucrata HOM05D005997 ORTHO05D008323 2.2e-99 365.5 174 100.0
TAR624G0829 Trochodendron aralioides HOM05D005997 ORTHO05D008323 4.3e-71 271.6 173 75.1
Actinidia00103 Actinidia chinensis HOM05D005997 ORTHO05D008323 1.8e-69 266.2 173 74.0
Dinv40826 Davidia involucrata HOM05D005997 ORTHO05D008323 3.1e-69 265.4 156 81.4
Hma1.2p1_0036F.1_g022850 Hydrangea macrophylla HOM05D005997 ORTHO05D008323 2.6e-68 262.3 165 77.0
Cc05_g14560 Coffea canephora HOM05D005997 ORTHO05D008323 2.1e-65 252.7 176 70.5
Ciclev10009024m.g Citrus clementina HOM05D005997 ORTHO05D008323 1.3e-64 250.0 173 68.2
GSVIVG01037764001 Vitis vinifera HOM05D005997 ORTHO05D008323 9.7e-63 243.8 168 70.8
Prupe.4G230500 Prunus persica HOM05D005997 ORTHO05D008323 1.7e-62 243.0 177 68.4
FAN21G1688 Fragaria x ananassa HOM05D005997 ORTHO05D008323 8.2e-62 240.7 173 69.4
Rhsim06G0225700 Rhododendron simsii HOM05D005997 ORTHO05D008323 1.8e-61 239.6 173 69.9
RcHm_v2.0_Chr5g0042181 Rosa chinensis HOM05D005997 ORTHO05D008323 1.8e-61 239.6 173 69.4
RcHm_v2.0_Chr5g0042111 Rosa chinensis HOM05D005997 ORTHO05D008323 4.1e-61 238.4 173 68.2
Gohir.D01G072400 Gossypium hirsutum HOM05D005997 ORTHO05D008323 9.1e-61 237.3 176 65.9
Sabra08G0137600 Salix brachista HOM05D005997 ORTHO05D008323 9.1e-61 237.3 174 66.7
Potri.008G180300 Populus trichocarpa HOM05D005997 ORTHO05D008323 1.5e-60 236.5 174 67.8
Sopen07g033400 Solanum pennellii HOM05D005997 ORTHO05D008323 3.4e-60 235.3 176 67.0
PGSC0003DMG400022292 Solanum tuberosum HOM05D005997 ORTHO05D008323 5.9e-60 234.6 176 67.0
Gorai.002G095400 Gossypium raimondii HOM05D005997 ORTHO05D008323 7.7e-60 234.2 176 64.8
Solyc07g065180.3 Solanum lycopersicum HOM05D005997 ORTHO05D008323 1.0e-59 233.8 176 66.5
Sc07g0002940 Simmondsia chinensis HOM05D005997 ORTHO05D008323 1.3e-59 233.4 177 65.5
TWI38G0893 Tripterygium wilfordii HOM05D005997 ORTHO05D008323 1.3e-59 233.4 173 66.5
Gohir.A01G086200 Gossypium hirsutum HOM05D005997 ORTHO05D008323 3.8e-59 231.9 176 64.2
CSS0025804 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 6.5e-59 231.1 174 69.5
Manes.03G134100 Manihot esculenta HOM05D005997 ORTHO05D008323 8.5e-59 230.7 173 63.6
Eucgr.F03518 Eucalyptus grandis HOM05D005997 ORTHO05D008323 1.1e-58 230.3 174 64.9
Thecc.07G024000 Theobroma cacao HOM05D005997 ORTHO05D008323 1.4e-58 229.9 175 65.7
COL.COLO4_09766 Corchorus olitorius HOM05D005997 ORTHO05D008323 5.5e-58 228.0 175 65.7
FAN25G0611 Fragaria x ananassa HOM05D005997 ORTHO05D008323 5.5e-58 228.0 198 60.6
Phvul.006G051400 Phaseolus vulgaris HOM05D005997 ORTHO05D008323 5.5e-58 228.0 174 64.4
Duzib213G0008 Durio zibethinus HOM05D005997 ORTHO05D008323 1.2e-57 226.9 175 65.1
MD11G1206400 Malus domestica HOM05D005997 ORTHO05D008323 6.1e-57 224.6 173 63.6
Lj6g0009736 Lotus japonicus HOM05D005997 ORTHO05D008323 7.9e-57 224.2 173 61.3
Nitab4.5_0001160g0200 Nicotiana tabacum HOM05D005997 ORTHO05D008323 2.3e-56 222.6 176 63.1
Nitab4.5_0010102g0010 Nicotiana tabacum HOM05D005997 ORTHO05D008323 2.3e-56 222.6 174 63.8
CAN.G337.36 Capsicum annuum HOM05D005997 ORTHO05D008323 6.7e-56 221.1 172 64.0
VMungo0540G2314 Vigna mungo HOM05D005997 ORTHO05D008323 6.7e-56 221.1 174 63.2
Nn1g03269 Nelumbo nucifera HOM05D005997 ORTHO05D008323 2.0e-55 219.5 173 60.1
SGA_v2.0_scaffold168G38522 Striga asiatica HOM05D005997 ORTHO05D008323 2.0e-55 219.5 169 63.3
Glyma.08G325100 Glycine max HOM05D005997 ORTHO05D008323 2.6e-55 219.2 174 62.6
CANSAT11G0206 Cannabis sativa HOM05D005997 ORTHO05D008323 3.7e-54 215.3 176 64.2
MELO3C024895.2 Cucumis melo HOM05D005997 ORTHO05D008323 4.8e-54 214.9 173 59.5
Migut.M01687 Erythranthe guttata HOM05D005997 ORTHO05D008323 6.3e-54 214.5 177 62.7
TPR.G1907 Trifolium pratense HOM05D005997 ORTHO05D008323 6.3e-54 214.5 178 60.1
PSO210G1255 Papaver somniferum HOM05D005997 ORTHO05D008323 1.1e-53 213.8 165 61.8
Sed0012266 Sechium edule HOM05D005997 ORTHO05D008323 3.1e-53 212.2 173 60.1
CsaV3_7G018710 Cucumis sativus L. HOM05D005997 ORTHO05D008323 3.4e-52 208.8 158 62.0
FvH4_3g23860 Fragaria vesca HOM05D005997 ORTHO05D008323 7.7e-52 207.6 104 91.3
Ca_20145_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 5.0e-51 204.9 174 58.6
Lj1C884G3 Lonicera japonica HOM05D005997 ORTHO05D008323 5.0e-51 204.9 174 63.8
ClCG09G021010 Citrullus lanatus HOM05D005997 ORTHO05D008323 8.5e-51 204.1 205 51.7
Lalb_Chr06g0174051 Lupinus albus HOM05D005997 ORTHO05D008323 8.5e-51 204.1 173 57.2
Medtr3g055920 Medicago truncatula HOM05D005997 ORTHO05D008323 8.5e-51 204.1 149 67.1
arahy.Tifrunner.gnm1.ann1.JACZ02 Arachis hypogaea HOM05D005997 ORTHO05D008323 1.9e-50 203.0 144 66.7
MSTRG.6975 Avicennia marina HOM05D005997 ORTHO05D008323 1.9e-50 203.0 139 70.5
CiPaw.12G135200 Carya illinoinensis HOM05D005997 ORTHO05D008323 1.9e-50 203.0 105 88.6
DCAR_022603 Daucus carota HOM05D005997 ORTHO05D008323 3.2e-50 202.2 124 73.4
arahy.Tifrunner.gnm1.ann1.N1CS9Q Arachis hypogaea HOM05D005997 ORTHO05D008323 4.2e-50 201.8 143 67.1
Psat5g172000 Pisum sativum HOM05D005997 ORTHO05D008323 1.6e-49 199.9 174 55.7
unitig_899.g15278 Utricularia gibba HOM05D005997 ORTHO05D008323 2.7e-49 199.1 179 58.7
Aqoxy1G04030 Aquilegia oxysepala HOM05D005997 ORTHO05D008323 1.0e-48 197.2 136 70.6
Ca_20142_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 1.4e-48 196.8 173 57.8
THA.LOC104826490 Tarenaya hassleriana HOM05D005997 ORTHO05D008323 2.3e-48 196.1 148 62.2
SalBow8G0955 Salvia bowleyana HOM05D005997 ORTHO05D008323 3.0e-48 195.7 178 55.6
Oeu019619.1 Olea europaea HOM05D005997 ORTHO05D008323 2.0e-47 193.0 128 71.9
Haze_09774 Corylus avellana HOM05D005997 ORTHO05D008323 4.4e-47 191.8 156 64.7
Lsat_1_v5_gn_7_114661 Lactuca sativa HOM05D005997 ORTHO05D008323 7.4e-47 191.0 194 55.2
SEGI_04256 Sequoiadendron giganteum HOM05D005997 ORTHO05D008323 9.7e-47 190.7 115 74.8
EL10Ac4g07628 Beta vulgaris HOM05D005997 ORTHO05D008323 2.4e-45 186.0 150 61.3
Carub.0001s3961 Capsella rubella HOM05D005997 ORTHO05D008323 2.4e-45 186.0 112 74.1
ATR0712G169 Amborella trichopoda HOM05D005997 ORTHO05D008323 5.3e-45 184.9 107 77.6
Os03g0587100 Oryza sativa ssp. japonica HOM05D005997 ORTHO05D008323 9.1e-45 184.1 106 76.4
MBI16_g42314_MAGBIO Magnolia biondii HOM05D005997 ORTHO05D008323 2.0e-44 183.0 132 68.9
Thhalv10011693m.g Eutrema salsugineum HOM05D005997 ORTHO05D008323 3.5e-44 182.2 112 73.2
AL1G58220 Arabidopsis lyrata HOM05D005997 ORTHO05D008323 7.7e-44 181.0 112 73.2
arahy.Tifrunner.gnm1.ann1.D6FGWZ Arachis hypogaea HOM05D005997 ORTHO05D008323 1.7e-43 179.9 126 69.0
CARHR040570 Cardamine hirsuta HOM05D005997 ORTHO05D008323 1.7e-43 179.9 123 67.5
Aa31LG10G3760 Aethionema arabicum HOM05D005997 ORTHO05D008323 2.2e-43 179.5 158 58.2
ECA236G3940 Erigeron canadensis HOM05D004336 ORTHO05D005367 3.8e-43 178.7 111 73.0
BraA06t23516Z Brassica rapa HOM05D005997 ORTHO05D008323 8.5e-43 177.6 121 66.9
AT1G50575 Arabidopsis thaliana HOM05D005997 ORTHO05D008323 1.1e-42 177.2 112 71.4
BcaC08g43226 Brassica carinata HOM05D005997 ORTHO05D008323 1.9e-42 176.4 121 65.3
A06p03040 Brassica napus HOM05D005997 ORTHO05D008323 1.9e-42 176.4 121 66.1
C06p05740 Brassica napus HOM05D005997 ORTHO05D008323 1.9e-42 176.4 121 65.3
BolC6t35684H Brassica oleracea HOM05D005997 ORTHO05D008323 1.9e-42 176.4 121 65.3
PGR044G2356 Punica granatum HOM05D005997 ORTHO05D008323 2.5e-42 176.0 105 75.2
Sp1g37390 Schrenkiella parvula HOM05D005997 ORTHO05D008323 4.2e-42 175.3 112 71.4
BcaB07g33491 Brassica carinata HOM05D005997 ORTHO05D008323 9.4e-42 174.1 115 67.8
Zm00001eb049320 Zea mays HOM05D005997 ORTHO05D008323 1.2e-41 173.7 111 69.4
QL08p008622 Quercus lobata HOM05D005997 ORTHO05D008323 2.7e-41 172.6 197 50.3
HPP92_007350 Vanilla planifolia HOM05D005997 ORTHO05D008323 4.7e-41 171.8 116 66.4
SMO196G0283 Selaginella moellendorffii HOM05D005997 ORTHO05D008323 8.8e-40 167.5 106 70.8
AagrBONN_evm.TU.Sc2ySwM_362.871 Anthoceros agrestis HOM05D005997 ORTHO05D008323 2.6e-39 166.0 115 65.2
Aqoxy1G04027 Aquilegia oxysepala HOM05D005997 ORTHO05D008323 3.7e-38 162.2 106 71.7
CDE07G1873 Ceratophyllum demersum HOM05D005997 ORTHO05D008323 4.8e-38 161.8 125 63.2
Glyma.18G084600 Glycine max HOM05D005997 ORTHO05D008323 9.1e-37 157.5 92 77.2
Peaxi162Scf00047g00845 Petunia axillaris HOM05D005997 ORTHO05D008323 1.6e-36 156.8 112 67.0
Pp3c14_23810 Physcomitrium patens HOM05D005997 ORTHO05D008323 1.2e-33 147.1 106 62.3
PGR031G3624 Punica granatum HOM05D005997 ORTHO05D008323 6.1e-33 144.8 79 81.0
vmacro11568 Vaccinium macrocarpon HOM05D005997 ORTHO05D008323 6.1e-33 144.8 138 55.8
PSO302G0218 Papaver somniferum HOM05D005997 ORTHO05D008323 1.4e-29 133.7 174 43.7
Cpa.g.sc12.206 Carica papaya HOM05D005997 ORTHO05D008323 2.4e-29 132.9 157 48.4
CSS0048391 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 3.5e-28 129.0 79 78.5
Atru.BG.132.p Acer truncatum HOM05D005997 ORTHO05D008323 5.9e-28 128.3 63 88.9
Psat5g171680 Pisum sativum HOM05D005997 ORTHO05D008323 2.1e-25 119.8 68 73.5
AUR62015935 Chenopodium quinoa HOM05D005997 ORTHO05D008323 1.4e-24 117.1 63 81.0
AUR62040674 Chenopodium quinoa HOM05D005997 ORTHO05D008323 1.4e-24 117.1 63 81.0
SEGI_34153 Sequoiadendron giganteum HOM05D005997 ORTHO05D008323 5.7e-23 111.7 61 82.0
MCO09G728 Micromonas commoda HOM05D004293 ORTHO05D005044 1.3e-22 110.5 111 45.0
MCO11G065 Micromonas commoda HOM05D004293 ORTHO05D005044 6.3e-22 108.2 111 45.0
Cre01.g039850 Chlamydomonas reinhardtii HOM05D005997 ORTHO05D005044 2.4e-21 106.3 115 45.2
CSS0044071 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 1.2e-20 104.0 56 87.5
CSS0025137 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 9.5e-18 94.4 50 88.0
QL08p004262 Quercus lobata HOM05D005997 ORTHO05D008323 2.8e-17 92.8 56 75.0
QL08p058329 Quercus lobata HOM05D005997 ORTHO05D008323 2.8e-17 92.8 56 75.0
Rhsim03G0100400 Rhododendron simsii HOM05D005997 ORTHO05D338268 2.0e-15 86.7 92 53.3
PRCOL_00002636 Prasinoderma coloniale HOM05D005997 ORTHO05D008323 7.5e-15 84.7 106 44.3
QL08p058354 Quercus lobata HOM05D005997 ORTHO05D007626 1.8e-13 80.1 54 72.2
PRCOL_00000116 Prasinoderma coloniale HOM05D005997 ORTHO05D008323 1.2e-12 77.4 90 40.0
QL05p025044 Quercus lobata HOM05D005997 ORTHO05D008323 6.0e-12 75.1 75 53.3
Lsat_1_v5_gn_8_39280 Lactuca sativa HOM05D005997 ORTHO05D230963 1.9e-10 70.1 46 67.4
arahy.Tifrunner.gnm1.ann1.U3B0HF Arachis hypogaea HOM05D003842 ORTHO05D026908 3.1e-08 62.8 36 83.3
QL08p004281 Quercus lobata HOM05D005997 ORTHO05D007626 1.5e-07 60.5 57 54.4
QL08p004656 Quercus lobata HOM05D005997 ORTHO05D337365 4.4e-07 58.9 35 77.1
QL08p004325 Quercus lobata HOM05D005997 ORTHO05D337094 8.3e-06 54.7 37 73.0
QL11p054366 Quercus lobata HOM05D005997 ORTHO05D338109 8.3e-06 54.7 37 73.0


User provided reference genes

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