Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv10229 Davidia involucrata HOM05D007019 ORTHO05D008398 1.3e-142 510.0 303 100.0
Dinv03401 Davidia involucrata HOM05D007019 ORTHO05D008398 1.8e-128 463.0 353 83.9
CiPaw.07G232900 Carya illinoinensis HOM05D007019 ORTHO05D008398 5.4e-101 371.7 353 61.8
Prupe.1G396900 Prunus persica HOM05D007019 ORTHO05D008398 9.1e-101 370.9 356 62.4
Manes.16G132200 Manihot esculenta HOM05D007019 ORTHO05D008398 2.7e-100 369.4 353 61.5
Hma1.2p1_0737F.1_g210790 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 1.2e-97 360.5 353 60.1
Gorai.009G064200 Gossypium raimondii HOM05D007019 ORTHO05D008398 2.1e-97 359.8 353 60.6
Actinidia14141 Actinidia chinensis HOM05D007019 ORTHO05D008398 3.6e-97 359.0 353 59.5
QL02p018053 Quercus lobata HOM05D007019 ORTHO05D008398 3.6e-97 359.0 352 58.8
Gohir.D05G063200 Gossypium hirsutum HOM05D007019 ORTHO05D008398 4.7e-97 358.6 353 63.2
Eucgr.C04032 Eucalyptus grandis HOM05D007019 ORTHO05D008398 6.1e-97 358.2 353 59.5
Gohir.A05G061000 Gossypium hirsutum HOM05D007019 ORTHO05D008398 1.8e-96 356.7 353 64.0
Rhsim02G0217600 Rhododendron simsii HOM05D007019 ORTHO05D008398 1.8e-96 356.7 353 62.6
TWI32G0429 Tripterygium wilfordii HOM05D007019 ORTHO05D008398 5.2e-96 355.1 353 57.2
CSS0016918 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 8.8e-96 354.4 353 59.8
CSS0023374 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 8.8e-96 354.4 353 59.8
Thecc.09G013400 Theobroma cacao HOM05D007019 ORTHO05D008398 9.8e-95 350.9 353 58.1
Cfa013011 Carpinus fangiana HOM05D007019 ORTHO05D008398 1.3e-94 350.5 356 59.6
MD08G1051900 Malus domestica HOM05D007019 ORTHO05D008398 2.2e-94 349.7 359 61.3
Duzib168G1437 Durio zibethinus HOM05D007019 ORTHO05D008398 6.3e-94 348.2 354 59.3
RcHm_v2.0_Chr6g0299181 Rosa chinensis HOM05D007019 ORTHO05D008398 2.4e-93 346.3 353 63.7
COL.COLO4_18972 Corchorus olitorius HOM05D007019 ORTHO05D008398 9.2e-93 344.4 353 60.1
MSTRG.1627 Avicennia marina HOM05D007019 ORTHO05D008398 1.2e-92 344.0 354 61.9
MELO3C011312.2 Cucumis melo HOM05D007019 ORTHO05D008398 3.5e-92 342.4 353 59.5
Lj7A737G40 Lonicera japonica HOM05D007019 ORTHO05D008398 3.5e-92 342.4 365 56.2
Lalb_Chr15g0081591 Lupinus albus HOM05D007019 ORTHO05D008398 4.5e-92 342.0 352 59.1
arahy.Tifrunner.gnm1.ann1.SS16UG Arachis hypogaea HOM05D007019 ORTHO05D008398 1.0e-91 340.9 353 56.7
Potri.018G016200 Populus trichocarpa HOM05D007019 ORTHO05D008398 1.0e-91 340.9 352 56.2
Atru.chr7.2574 Acer truncatum HOM05D007019 ORTHO05D008398 1.7e-91 340.1 353 56.1
Cc00_g05220 Coffea canephora HOM05D007019 ORTHO05D008398 8.6e-91 337.8 353 55.5
CANSAT25G0065 Cannabis sativa HOM05D007019 ORTHO05D008398 1.9e-90 336.7 352 55.1
ECA240G4302 Erigeron canadensis HOM05D007019 ORTHO05D008398 3.3e-90 335.9 351 61.3
ClCG08G013800 Citrullus lanatus HOM05D007019 ORTHO05D008398 4.3e-90 335.5 353 60.1
FvH4_2g41350 Fragaria vesca HOM05D007019 ORTHO05D008398 4.3e-90 335.5 353 58.1
Lj6g0025581 Lotus japonicus HOM05D007019 ORTHO05D008398 7.3e-90 334.7 353 55.5
Oeu021907.1 Olea europaea HOM05D007019 ORTHO05D008398 7.3e-90 334.7 353 58.9
Sed0002524 Sechium edule HOM05D007019 ORTHO05D008398 7.3e-90 334.7 353 59.2
HanXRQChr03g0084841 Helianthus annuus HOM05D007019 ORTHO05D008398 1.2e-89 334.0 354 55.9
arahy.Tifrunner.gnm1.ann1.MG10WM Arachis hypogaea HOM05D007019 ORTHO05D008398 2.8e-89 332.8 353 56.1
CsaV3_2G032590 Cucumis sativus L. HOM05D007019 ORTHO05D008398 1.8e-88 330.1 353 58.6
Nn6g33490 Nelumbo nucifera HOM05D007019 ORTHO05D008398 6.8e-88 328.2 356 58.4
Glyma.18G091000 Glycine max HOM05D007019 ORTHO05D008398 1.2e-87 327.4 351 56.1
PGR044G2245 Punica granatum HOM05D007019 ORTHO05D008398 4.4e-87 325.5 356 54.8
VMungo0540G1233 Vigna mungo HOM05D007019 ORTHO05D008398 4.4e-87 325.5 354 53.1
MBI14_g16432_MAGBIO Magnolia biondii HOM05D007019 ORTHO05D008398 5.7e-87 325.1 362 55.8
DCAR_003030 Daucus carota HOM05D007019 ORTHO05D008398 1.3e-86 323.9 354 54.5
Glyma.08G321000 Glycine max HOM05D007019 ORTHO05D008398 1.7e-86 323.6 354 54.5
Ciclev10008089m.g Citrus clementina HOM05D007019 ORTHO05D008398 3.7e-86 322.4 354 54.0
Phvul.006G047900 Phaseolus vulgaris HOM05D007019 ORTHO05D008398 4.9e-86 322.0 354 57.9
TPR.G32253 Trifolium pratense HOM05D007019 ORTHO05D008398 6.4e-86 321.6 353 54.7
FAN27G2994 Fragaria x ananassa HOM05D007019 ORTHO05D008398 1.1e-85 320.9 345 57.7
Migut.E01445 Erythranthe guttata HOM05D007019 ORTHO05D008398 2.4e-85 319.7 355 54.9
Ca_26389_v3 Cicer arietinum L. HOM05D007019 ORTHO05D008398 9.2e-85 317.8 353 58.6
Hma1.2p1_0737F.1_g210800 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 9.2e-85 317.8 331 58.3
CAN.G273.24 Capsicum annuum HOM05D007019 ORTHO05D008398 1.2e-84 317.4 352 56.5
Psat5g174160 Pisum sativum HOM05D007019 ORTHO05D008398 2.7e-84 316.2 354 52.3
Solyc08g068820.3 Solanum lycopersicum HOM05D007019 ORTHO05D008398 4.6e-84 315.5 349 53.9
PGSC0003DMG400014784 Solanum tuberosum HOM05D007019 ORTHO05D008398 1.7e-83 313.5 352 53.1
Aqoxy7G03288 Aquilegia oxysepala HOM05D007019 ORTHO05D008398 1.9e-82 310.1 354 55.6
PSO731G0070 Papaver somniferum HOM05D007019 ORTHO05D008398 1.8e-80 303.5 362 50.6
Medtr3g053700 Medicago truncatula HOM05D007019 ORTHO05D008398 3.1e-80 302.8 353 51.8
Hund25606 Selenicereus undatus HOM05D007019 ORTHO05D008398 1.2e-79 300.8 358 55.6
PSO210G0129 Papaver somniferum HOM05D007019 ORTHO05D008398 2.6e-79 299.7 368 53.5
FAN15G0718 Fragaria x ananassa HOM05D007019 ORTHO05D008398 7.5e-79 298.1 331 57.4
Lsat_1_v5_gn_6_78060 Lactuca sativa HOM05D007019 ORTHO05D008398 9.8e-79 297.7 351 56.1
Cpa.g.sc148.46 Carica papaya HOM05D007019 ORTHO05D008398 3.7e-78 295.8 366 50.5
Sc23g0006120 Simmondsia chinensis HOM05D007019 ORTHO05D008398 3.7e-78 295.8 357 54.3
CDE04G0815 Ceratophyllum demersum HOM05D007019 ORTHO05D008398 8.3e-78 294.7 364 49.7
unitig_46.g18223 Utricularia gibba HOM05D007019 ORTHO05D008398 8.3e-78 294.7 354 50.3
Sabra18G0019700 Salix brachista HOM05D007019 ORTHO05D008398 1.9e-77 293.5 329 53.5
Nitab4.5_0000406g0110 Nicotiana tabacum HOM05D007019 ORTHO05D008398 5.4e-77 292.0 330 56.4
EL10Ac2g02454 Beta vulgaris HOM05D007019 ORTHO05D008398 1.2e-76 290.8 358 48.6
ATR0580G102 Amborella trichopoda HOM05D007019 ORTHO05D008398 1.6e-73 280.4 360 48.3
Thhalv10000137m.g Eutrema salsugineum HOM05D007019 ORTHO05D008398 1.6e-73 280.4 366 53.0
HPP92_010745 Vanilla planifolia HOM05D007019 ORTHO05D008398 6.8e-72 275.0 365 45.5
THA.LOC104819948 Tarenaya hassleriana HOM05D007019 ORTHO05D008398 1.2e-71 274.2 370 48.9
Aa31LG7G11570 Aethionema arabicum HOM05D007019 ORTHO05D008398 3.4e-71 272.7 363 51.5
CARHR294580 Cardamine hirsuta HOM05D007019 ORTHO05D008398 7.5e-71 271.6 371 46.6
AT2G24830 Arabidopsis thaliana HOM05D007019 ORTHO05D008398 1.3e-70 270.8 365 47.7
SGA_v2.0_scaffold169G38600 Striga asiatica HOM05D007019 ORTHO05D008398 4.9e-70 268.9 366 49.2
Nitab4.5_0012106g0030 Nicotiana tabacum HOM05D007019 ORTHO05D008398 1.9e-69 266.9 328 56.1
Carub.0004s0445 Capsella rubella HOM05D007019 ORTHO05D008398 2.7e-68 263.1 365 46.3
Sp4g03850 Schrenkiella parvula HOM05D007019 ORTHO05D008398 1.3e-67 260.8 365 45.2
AL4G15870 Arabidopsis lyrata HOM05D007019 ORTHO05D008398 1.7e-67 260.4 366 49.7
Zm00001eb257650 Zea mays HOM05D007019 ORTHO05D008398 4.7e-65 252.3 359 47.9
AUR62032443 Chenopodium quinoa HOM05D007019 ORTHO05D008398 1.8e-64 250.4 343 46.6
AUR62024776 Chenopodium quinoa HOM05D007019 ORTHO05D008398 3.4e-63 246.1 344 48.0
SEGI_04420 Sequoiadendron giganteum HOM05D007019 ORTHO05D008398 4.4e-63 245.7 364 48.1
BraA09t41004Z Brassica rapa HOM05D007019 ORTHO05D008398 1.4e-61 240.7 365 48.8
C08p39020 Brassica napus HOM05D007019 ORTHO05D008398 5.4e-61 238.8 366 47.5
BolC8t51475H Brassica oleracea HOM05D007019 ORTHO05D008398 5.4e-61 238.8 366 47.5
A09p56030 Brassica napus HOM05D007019 ORTHO05D008398 1.2e-60 237.7 363 48.2
A09p56090 Brassica napus HOM05D007019 ORTHO05D008398 3.0e-59 233.0 364 46.2
BcaC07g40903 Brassica carinata HOM05D007019 ORTHO05D008398 4.7e-57 225.7 356 47.2
TAR636G0280 Trochodendron aralioides HOM05D007019 ORTHO05D008398 5.2e-56 222.2 168 68.5
Sopen08g022560 Solanum pennellii HOM05D007019 ORTHO05D008398 4.3e-50 202.6 260 43.5
SHI21092 Sapria himalayana HOM05D007019 ORTHO05D008398 1.3e-49 201.1 324 42.3
Mapoly0067s0020 Marchantia polymorpha HOM05D007019 ORTHO05D008398 2.8e-49 199.9 368 38.9
vmacro11274 Vaccinium macrocarpon HOM05D007019 ORTHO05D008398 2.9e-46 189.9 296 44.3
SMO116G0382 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 5.1e-43 179.1 352 39.8
AagrBONN_evm.TU.Sc2ySwM_117.1463 Anthoceros agrestis HOM05D007019 ORTHO05D008398 1.1e-40 171.4 358 36.6
Pp3c21_5730 Physcomitrium patens HOM05D007019 ORTHO05D008398 9.0e-40 168.3 366 32.5
SMO269G0003 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 1.0e-19 101.7 291 30.9
CBR_g30106 Chara braunii HOM05D007019 ORTHO05D008398 8.8e-19 98.6 356 32.6
SalBow6G1623 Salvia bowleyana HOM05D007019 ORTHO05D008398 1.8e-16 90.9 103 46.6
SMO116G0105 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 2.0e-15 87.4 289 32.5
GSVIVG01036005001 Vitis vinifera HOM05D007019 ORTHO05D008398 4.5e-15 86.3 45 86.7
TAR636G2565 Trochodendron aralioides HOM05D007019 ORTHO05D008398 7.7e-07 58.9 43 74.4


User provided reference genes

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