Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv10174 Davidia involucrata HOM05D004897 ORTHO05D005928 6.2e-284 980.3 573 100.0
Hma1.2p1_0669F.1_g200180 Hydrangea macrophylla HOM05D004897 ORTHO05D005928 3.0e-185 652.5 590 70.8
CSS0030961 Camellia sinensis var. sinensis HOM05D004897 ORTHO05D005928 4.3e-168 595.5 584 68.0
Actinidia35124 Actinidia chinensis HOM05D004897 ORTHO05D005928 1.6e-154 550.4 580 64.0
TAR622G0961 Trochodendron aralioides HOM05D004897 ORTHO05D005928 5.7e-152 542.0 590 62.2
Actinidia18901 Actinidia chinensis HOM05D004897 ORTHO05D005928 1.9e-147 526.9 581 62.0
Duzib084G0246 Durio zibethinus HOM05D004897 ORTHO05D005928 3.9e-137 492.7 584 59.8
Cfa019677 Carpinus fangiana HOM05D004897 ORTHO05D005928 1.5e-136 490.7 584 58.7
Lj9C421G3 Lonicera japonica HOM05D004897 ORTHO05D005928 5.7e-136 488.8 569 59.4
Thecc.03G053700 Theobroma cacao HOM05D004897 ORTHO05D005928 2.4e-134 483.4 582 59.5
Dinv18253 Davidia involucrata HOM05D004897 ORTHO05D005928 5.0e-132 475.7 373 79.9
Nn4g24194 Nelumbo nucifera HOM05D004897 ORTHO05D005928 1.2e-130 471.1 590 55.3
Rhsim12G0138900 Rhododendron simsii HOM05D004897 ORTHO05D005928 2.3e-129 466.8 572 58.7
Haze_18817 Corylus avellana HOM05D004897 ORTHO05D005928 2.6e-128 463.4 653 53.3
Gohir.A12G268700 Gossypium hirsutum HOM05D004897 ORTHO05D005928 3.7e-127 459.5 589 56.7
Prupe.5G232100 Prunus persica HOM05D004897 ORTHO05D005928 4.8e-127 459.1 597 56.3
Gohir.D12G269100 Gossypium hirsutum HOM05D004897 ORTHO05D005928 4.5e-125 452.6 591 56.3
QL10p028216 Quercus lobata HOM05D004897 ORTHO05D005928 5.9e-125 452.2 581 57.1
QL10p028331 Quercus lobata HOM05D004897 ORTHO05D005928 2.9e-124 449.9 580 57.4
Gorai.008G289400 Gossypium raimondii HOM05D004897 ORTHO05D005928 1.1e-123 448.0 591 56.0
MD06G1230800 Malus domestica HOM05D004897 ORTHO05D005928 7.2e-123 445.3 592 56.8
MD14G1235400 Malus domestica HOM05D004897 ORTHO05D005928 4.7e-122 442.6 598 56.2
CiPaw.15G140900 Carya illinoinensis HOM05D004897 ORTHO05D005928 6.7e-121 438.7 588 56.3
DCAR_014009 Daucus carota HOM05D004897 ORTHO05D005928 4.4e-120 436.0 576 55.6
RcHm_v2.0_Chr7g0178571 Rosa chinensis HOM05D004897 ORTHO05D005928 1.3e-119 434.5 594 55.7
FAN13G1819 Fragaria x ananassa HOM05D004897 ORTHO05D005928 6.3e-119 432.2 585 54.7
Potri.015G039800 Populus trichocarpa HOM05D004897 ORTHO05D005928 1.1e-118 431.4 587 55.2
Eucgr.B00942 Eucalyptus grandis HOM05D004897 ORTHO05D005928 1.4e-118 431.0 578 53.1
vmacro16414 Vaccinium macrocarpon HOM05D004897 ORTHO05D005928 1.0e-116 424.9 748 47.3
FAN04G2242 Fragaria x ananassa HOM05D004897 ORTHO05D005928 2.2e-116 423.7 587 54.3
COL.COLO4_16135 Corchorus olitorius HOM05D004897 ORTHO05D005928 3.8e-116 422.9 583 56.4
Gohir.A09G175700 Gossypium hirsutum HOM05D004897 ORTHO05D005928 1.5e-115 421.0 589 53.7
FvH4_5g17221 Fragaria vesca HOM05D004897 ORTHO05D005928 3.2e-115 419.9 583 53.2
FAN18G0124 Fragaria x ananassa HOM05D004897 ORTHO05D005928 4.2e-115 419.5 584 53.3
FAN08G3076 Fragaria x ananassa HOM05D004897 ORTHO05D005928 2.7e-114 416.8 589 54.0
Nitab4.5_0006894g0040 Nicotiana tabacum HOM05D004897 ORTHO05D005928 3.6e-114 416.4 580 55.0
TWI81G0456 Tripterygium wilfordii HOM05D004897 ORTHO05D005928 1.8e-113 414.1 594 52.9
TWI60G0918 Tripterygium wilfordii HOM05D004897 ORTHO05D005928 2.3e-113 413.7 595 54.8
Glyma.05G244800 Glycine max HOM05D004897 ORTHO05D005928 5.7e-112 409.1 587 54.9
Oeu014377.2 Olea europaea HOM05D004897 ORTHO05D005928 7.5e-112 408.7 575 51.5
PGSC0003DMG400005743 Solanum tuberosum HOM05D004897 ORTHO05D005928 4.5e-109 399.4 585 54.2
GSVIVG01008418001 Vitis vinifera HOM05D004897 ORTHO05D005928 2.3e-108 397.1 481 59.9
Manes.14G170400 Manihot esculenta HOM05D004897 ORTHO05D005928 5.0e-108 396.0 595 52.6
Cpa.g.sc3.408 Carica papaya HOM05D004897 ORTHO05D005928 1.1e-107 394.8 572 53.8
Sabra15G0057300 Salix brachista HOM05D004897 ORTHO05D005928 1.5e-107 394.4 585 53.3
Ciclev10007731m.g Citrus clementina HOM05D004897 ORTHO05D005928 1.9e-107 394.0 577 55.3
Cc04_g06380 Coffea canephora HOM05D004897 ORTHO05D005928 4.2e-107 392.9 577 53.4
Nitab4.5_0001456g0120 Nicotiana tabacum HOM05D004897 ORTHO05D005928 6.1e-106 389.0 577 54.8
Glyma.08G053300 Glycine max HOM05D004897 ORTHO05D005928 8.0e-106 388.7 587 53.8
CAN.G1129.49 Capsicum annuum HOM05D004897 ORTHO05D005928 1.4e-105 387.9 585 52.8
MSTRG.4571 Avicennia marina HOM05D004897 ORTHO05D005928 2.3e-105 387.1 578 52.4
Migut.D01558 Erythranthe guttata HOM05D004897 ORTHO05D005928 3.0e-105 386.7 576 49.8
PSO017G1741 Papaver somniferum HOM05D004897 ORTHO05D005928 5.2e-105 386.0 577 51.8
Phvul.002G329100 Phaseolus vulgaris HOM05D004897 ORTHO05D005928 2.6e-104 383.6 587 51.3
Lsat_1_v5_gn_8_144040 Lactuca sativa HOM05D004897 ORTHO05D005928 3.4e-104 383.3 576 53.3
VMungo0251G1788 Vigna mungo HOM05D004897 ORTHO05D005928 3.4e-104 383.3 585 51.5
Sc10g0009320 Simmondsia chinensis HOM05D004897 ORTHO05D005928 9.8e-104 381.7 613 51.9
Aqoxy3G00106 Aquilegia oxysepala HOM05D004897 ORTHO05D005928 1.1e-99 368.2 590 49.7
Lalb_Chr05g0221751 Lupinus albus HOM05D004897 ORTHO05D005928 1.9e-99 367.5 582 51.0
Lalb_Chr16g0387081 Lupinus albus HOM05D004897 ORTHO05D005928 5.6e-99 365.9 578 51.6
Ca_17200_v3 Cicer arietinum L. HOM05D004897 ORTHO05D005928 7.3e-99 365.5 584 49.8
PSO478G0546 Papaver somniferum HOM05D004897 ORTHO05D005928 7.3e-99 365.5 577 51.5
ClCG06G014390 Citrullus lanatus HOM05D004897 ORTHO05D005928 2.1e-98 364.0 585 47.7
Hund02326 Selenicereus undatus HOM05D004897 ORTHO05D005928 6.1e-98 362.5 581 50.4
TPR.G1406 Trifolium pratense HOM05D004897 ORTHO05D005928 8.0e-98 362.1 595 49.9
Psat7g002120 Pisum sativum HOM05D004897 ORTHO05D005928 6.8e-97 359.0 589 51.1
SalBow1G4576 Salvia bowleyana HOM05D004897 ORTHO05D005928 1.2e-96 358.2 577 50.3
SGA_v2.0_scaffold168G38498 Striga asiatica HOM05D004897 ORTHO05D005928 1.5e-96 357.8 578 49.8
PGR083G0946 Punica granatum HOM05D004897 ORTHO05D005928 9.8e-96 355.1 586 48.3
MBI12_g30398_MAGBIO Magnolia biondii HOM05D004897 ORTHO05D005928 3.7e-95 353.2 590 48.6
CsaV3_1G004270 Cucumis sativus L. HOM05D004897 ORTHO05D005928 1.4e-94 351.3 588 48.3
arahy.Tifrunner.gnm1.ann1.Y8NJDB Arachis hypogaea HOM05D004897 ORTHO05D005928 9.2e-94 348.6 600 48.2
Lj4g0010445 Lotus japonicus HOM05D004897 ORTHO05D005928 1.7e-92 344.4 575 48.5
arahy.Tifrunner.gnm1.ann1.QTT902 Arachis hypogaea HOM05D004897 ORTHO05D005928 3.0e-92 343.6 607 47.8
THA.LOC104812165 Tarenaya hassleriana HOM05D004897 ORTHO05D005928 5.0e-92 342.8 585 48.7
ECA233G2541 Erigeron canadensis HOM05D004897 ORTHO05D005928 7.3e-91 339.0 582 48.5
Sed0002019 Sechium edule HOM05D004897 ORTHO05D005928 2.8e-90 337.0 594 47.0
Medtr8g107060 Medicago truncatula HOM05D004897 ORTHO05D005928 1.4e-89 334.7 577 47.5
HanXRQChr08g0227441 Helianthus annuus HOM05D004897 ORTHO05D005928 6.8e-89 332.4 590 48.6
C05p16500 Brassica napus HOM05D004897 ORTHO05D005928 2.4e-86 323.9 577 47.7
CDE05G2998 Ceratophyllum demersum HOM05D004897 ORTHO05D005928 4.1e-86 323.2 578 44.1
Atru.chr9.1748 Acer truncatum HOM05D004897 ORTHO05D005928 2.1e-85 320.9 575 48.9
BolC5t30347H Brassica oleracea HOM05D004897 ORTHO05D005928 3.5e-85 320.1 576 46.5
A06p14220 Brassica napus HOM05D004897 ORTHO05D005928 1.1e-83 315.1 576 46.9
BraA06t24553Z Brassica rapa HOM05D004897 ORTHO05D005928 1.1e-83 315.1 576 46.4
Sp1g16170 Schrenkiella parvula HOM05D004897 ORTHO05D005928 7.3e-83 312.4 575 46.3
BcaB07g31825 Brassica carinata HOM05D004897 ORTHO05D005928 6.2e-82 309.3 575 46.4
MELO3C017351.2 Cucumis melo HOM05D004897 ORTHO05D005928 1.8e-81 307.8 591 44.5
AL1G30560 Arabidopsis lyrata HOM05D004897 ORTHO05D005928 8.9e-81 305.4 576 46.4
Thhalv10007004m.g Eutrema salsugineum HOM05D004897 ORTHO05D005928 1.5e-80 304.7 573 45.9
Carub.0001s1783 Capsella rubella HOM05D004897 ORTHO05D005928 2.6e-80 303.9 578 45.5
AUR62042935 Chenopodium quinoa HOM05D004897 ORTHO05D005928 1.4e-78 298.1 568 41.9
AT1G18190 Arabidopsis thaliana HOM05D004897 ORTHO05D005928 2.7e-77 293.9 577 45.4
Aa31LG7G2880 Aethionema arabicum HOM05D004897 ORTHO05D005928 6.6e-76 289.3 606 43.2
A08p30510 Brassica napus HOM05D004897 ORTHO05D005928 3.3e-75 287.0 576 45.0
Ah.11g045250 Amaranthus hybridus HOM05D004897 ORTHO05D005928 1.2e-74 285.0 578 45.7
BcaC05g25714 Brassica carinata HOM05D004897 ORTHO05D005928 1.0e-60 238.8 257 66.1
BcaC07g38902 Brassica carinata HOM05D004897 ORTHO05D005928 1.1e-59 235.3 574 36.9
Sed0018128 Sechium edule HOM05D004897 ORTHO05D005928 1.1e-59 235.3 372 51.6
Peaxi162Scf00683g00441 Petunia axillaris HOM05D004897 ORTHO05D005928 2.0e-56 224.6 158 77.8
HPP92_013368 Vanilla planifolia HOM05D004897 ORTHO05D005928 4.5e-56 223.4 585 38.8
ATR1102G065 Amborella trichopoda HOM05D004897 ORTHO05D005928 3.2e-54 217.2 542 43.2
BraA08t34983Z Brassica rapa HOM05D004897 ORTHO05D005928 3.1e-49 200.7 200 59.0
C08p18450 Brassica napus HOM05D004897 ORTHO05D005928 4.0e-49 200.3 200 58.0
Zm00001eb068130 Zea mays HOM05D004897 ORTHO05D005928 3.4e-48 197.2 203 54.2
CARHR018770 Cardamine hirsuta HOM05D004897 ORTHO05D005928 2.9e-47 194.1 465 42.8
Actinidia04720 Actinidia chinensis HOM05D004897 ORTHO05D005928 6.7e-44 183.0 411 46.7
Os04g0652500 Oryza sativa ssp. japonica HOM05D004897 ORTHO05D005928 2.5e-38 164.5 175 50.3
BcaNung05436 Brassica carinata HOM05D004897 ORTHO05D005928 1.8e-36 158.3 192 52.6
AUR62041008 Chenopodium quinoa HOM05D004897 ORTHO05D005928 5.0e-31 140.2 443 38.6
Zm00001eb072950 Zea mays HOM05D004897 ORTHO05D005928 5.1e-28 130.2 145 52.4
GSVIVG01008417001 Vitis vinifera HOM05D004897 ORTHO05D005928 5.7e-27 126.7 91 74.7
Oeu041185.1 Olea europaea HOM05D004897 ORTHO05D005928 1.7e-26 125.2 445 33.7
CARHR018760 Cardamine hirsuta HOM05D004897 ORTHO05D005928 2.2e-26 124.8 113 60.2
BolC8t49476H Brassica oleracea HOM05D004897 ORTHO05D005928 2.4e-25 121.3 163 46.6
BcaC05g25715 Brassica carinata HOM05D004897 ORTHO05D005928 4.5e-24 117.1 184 45.7
Mapoly0056s0112 Marchantia polymorpha HOM05D004897 ORTHO05D005928 1.7e-23 115.2 202 38.6
AagrBONN_evm.TU.Sc2ySwM_344.4779 Anthoceros agrestis HOM05D004897 ORTHO05D005928 6.5e-23 113.2 626 27.8
BcaB03g12969 Brassica carinata HOM05D004897 ORTHO05D005928 1.4e-22 112.1 183 46.4
Pp3c2_5550 Physcomitrium patens HOM05D004897 ORTHO05D005928 7.2e-22 109.8 669 29.3
Zm00001eb168530 Zea mays HOM05D004897 ORTHO05D005928 9.4e-22 109.4 127 46.5
Zm00001eb243110 Zea mays HOM05D004897 ORTHO05D005928 9.4e-22 109.4 127 46.5
Zm00001eb381910 Zea mays HOM05D004897 ORTHO05D005928 9.4e-22 109.4 127 46.5
Zm00001eb382530 Zea mays HOM05D004897 ORTHO05D005928 9.4e-22 109.4 127 46.5
ATR1102G018 Amborella trichopoda HOM05D004897 ORTHO05D005928 1.4e-20 105.5 95 63.2
Peaxi162Scf00683g00456 Petunia axillaris HOM05D004897 ORTHO05D005928 2.3e-20 104.8 124 54.0
Gorai.006G192000 Gossypium raimondii HOM05D004897 ORTHO05D005928 3.0e-20 104.4 348 38.8
CDE05G0958 Ceratophyllum demersum HOM05D004897 ORTHO05D005928 8.8e-20 102.8 84 70.2
Zm00001eb280830 Zea mays HOM05D004897 ORTHO05D005928 1.4e-17 95.5 118 43.2
Zm00001eb382330 Zea mays HOM05D004897 ORTHO05D005928 3.1e-17 94.4 89 55.1
BolC8t49477H Brassica oleracea HOM05D004897 ORTHO05D005928 6.5e-15 86.7 126 49.2
unitig_0.g806 Utricularia gibba HOM05D004897 ORTHO05D005928 1.0e-12 79.3 63 68.3
Actinidia04719 Actinidia chinensis HOM05D004897 ORTHO05D005928 1.5e-11 75.5 50 72.0
SEGI_33031 Sequoiadendron giganteum HOM05D004897 ORTHO05D005928 9.7e-11 72.8 103 44.7
Gohir.D09G170550 Gossypium hirsutum HOM05D004897 ORTHO05D005928 1.4e-09 68.9 44 77.3
Gorai.006G192100 Gossypium raimondii HOM05D004897 ORTHO05D005928 1.4e-09 68.9 44 77.3
TWI36G1671 Tripterygium wilfordii HOM05D004897 ORTHO05D005928 1.8e-09 68.6 95 52.6
SEGI_22595 Sequoiadendron giganteum HOM05D004897 ORTHO05D005928 2.4e-09 68.2 586 29.9
Oeu041181.1 Olea europaea HOM05D004897 ORTHO05D005928 7.0e-09 66.6 75 56.0
Prupe.5G050900 Prunus persica HOM05D004897 ORTHO05D005928 2.6e-08 64.7 49 73.5
arahy.Tifrunner.gnm1.ann1.U711QF Arachis hypogaea HOM05D004897 ORTHO05D005928 1.3e-07 62.4 80 53.8
MBI14_g27819_MAGBIO Magnolia biondii HOM05D004897 ORTHO05D022889 1.9e-06 58.5 39 71.8


User provided reference genes

Program Settings