Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv10149 Davidia involucrata HOM05D025042 ORTHO05D000132 7.6e-74 280.4 142 100.0
Dinv28314 Davidia involucrata HOM05D025042 ORTHO05D000132 9.3e-72 273.5 140 98.6
Dinv15945 Davidia involucrata HOM05D025042 ORTHO05D000132 3.8e-65 251.5 128 99.2
Dinv02662 Davidia involucrata HOM05D014046 ORTHO05D016984 1.3e-57 226.5 115 99.1
Dinv18251 Davidia involucrata HOM05D025042 ORTHO05D184524 1.6e-47 193.0 99 97.0
Dinv39228 Davidia involucrata HOM05D000231 ORTHO05D000132 9.4e-24 114.0 69 85.5
Dinv44959 Davidia involucrata HOM05D000231 ORTHO05D000132 1.4e-19 100.1 68 75.0
Rhsim06G0061900 Rhododendron simsii HOM05D000231 ORTHO05D000132 8.9e-14 80.9 69 60.9
CSS0006197 Camellia sinensis var. sinensis HOM05D000231 ORTHO05D000132 7.5e-13 77.8 77 54.5
CSS0048218 Camellia sinensis var. sinensis HOM05D000231 ORTHO05D000132 7.5e-13 77.8 72 59.7
Atru.chr13.823 Acer truncatum HOM05D000231 ORTHO05D000132 2.2e-12 76.3 71 53.5
CSS0033143 Camellia sinensis var. sinensis HOM05D000231 ORTHO05D000132 2.2e-12 76.3 72 59.7
Dinv23325 Davidia involucrata HOM05D025042 ORTHO05D000132 2.2e-12 76.3 45 88.9
Actinidia10194 Actinidia chinensis HOM05D000231 ORTHO05D000132 3.7e-12 75.5 62 56.5
QL12p037951 Quercus lobata HOM05D000231 ORTHO05D000132 6.3e-12 74.7 67 56.7
vmacro21436 Vaccinium macrocarpon HOM05D000231 ORTHO05D000132 1.1e-11 73.9 63 58.7
Haze_22447 Corylus avellana HOM05D000231 ORTHO05D000132 4.1e-11 72.0 69 55.1
Manes.18G045900 Manihot esculenta HOM05D000231 ORTHO05D000132 5.4e-11 71.6 69 53.6
Actinidia22691 Actinidia chinensis HOM05D000231 ORTHO05D000132 1.2e-10 70.5 67 50.7
CiPaw.07G175600 Carya illinoinensis HOM05D000231 ORTHO05D000132 3.5e-10 68.9 69 49.3
CiPaw.08G050000 Carya illinoinensis HOM05D000231 ORTHO05D000132 3.5e-10 68.9 69 49.3
COL.COLO4_28514 Corchorus olitorius HOM05D000231 ORTHO05D000132 3.5e-10 68.9 71 47.9
TAR628G1445 Trochodendron aralioides HOM05D000231 ORTHO05D000132 5.9e-10 68.2 67 52.2
MD08G1085300 Malus domestica HOM05D000231 ORTHO05D000132 1.0e-09 67.4 72 50.0
Sabra14G0010600 Salix brachista HOM05D000231 ORTHO05D000132 2.3e-09 66.2 77 42.9
Duzib093G2066 Durio zibethinus HOM05D000231 ORTHO05D000132 3.8e-09 65.5 71 49.3
Potri.014G016700 Populus trichocarpa HOM05D000231 ORTHO05D000132 3.8e-09 65.5 77 42.9
TAR376G0828 Trochodendron aralioides HOM05D000231 ORTHO05D000132 3.8e-09 65.5 69 47.8
Hma1.2p1_0210F.1_g089500 Hydrangea macrophylla HOM05D000231 ORTHO05D000132 5.0e-09 65.1 65 52.3
Manes.05G181500 Manihot esculenta HOM05D000231 ORTHO05D000132 5.0e-09 65.1 69 49.3
Nn1g04579 Nelumbo nucifera HOM05D000231 ORTHO05D000132 8.6e-09 64.3 67 46.3
GSVIVG01009353001 Vitis vinifera HOM05D000231 ORTHO05D000132 1.5e-08 63.5 64 54.7
Hma1.2p1_0808F.1_g221540 Hydrangea macrophylla HOM05D000231 ORTHO05D000132 3.3e-08 62.4 71 45.1
TAR381G0078 Trochodendron aralioides HOM05D000231 ORTHO05D000132 3.3e-08 62.4 99 39.4
Lalb_Chr24g0399471 Lupinus albus HOM05D000231 ORTHO05D000132 4.3e-08 62.0 60 50.0
Thecc.08G089700 Theobroma cacao HOM05D000231 ORTHO05D000132 5.6e-08 61.6 64 50.0
Potri.002G119000 Populus trichocarpa HOM05D000231 ORTHO05D000132 7.3e-08 61.2 66 45.5
Cfa004122 Carpinus fangiana HOM05D000231 ORTHO05D000132 1.2e-07 60.5 73 45.2
TPR.G33713 Trifolium pratense HOM05D000231 ORTHO05D000132 2.1e-07 59.7 66 48.5
arahy.Tifrunner.gnm1.ann1.I60LE0 Arachis hypogaea HOM05D000231 ORTHO05D000132 2.8e-07 59.3 61 45.9
arahy.Tifrunner.gnm1.ann1.M8FAJ3 Arachis hypogaea HOM05D000231 ORTHO05D000132 2.8e-07 59.3 61 45.9
Glyma.11G048500 Glycine max HOM05D000231 ORTHO05D000132 3.6e-07 58.9 66 47.0
DCAR_025795 Daucus carota HOM05D000231 ORTHO05D000132 6.1e-07 58.2 69 46.4
Gohir.A12G076400 Gossypium hirsutum HOM05D000231 ORTHO05D000132 6.1e-07 58.2 72 45.8
Lalb_Chr23g0267491 Lupinus albus HOM05D000231 ORTHO05D000132 8.0e-07 57.8 70 47.1
Potri.007G055300 Populus trichocarpa HOM05D000231 ORTHO05D000132 8.0e-07 57.8 67 44.8
CANSAT25G2160 Cannabis sativa HOM05D000231 ORTHO05D000132 1.0e-06 57.4 64 43.8
Ca_15903_v3 Cicer arietinum L. HOM05D000231 ORTHO05D000132 1.0e-06 57.4 66 47.0
Glyma.06G046200 Glycine max HOM05D000231 ORTHO05D000132 1.0e-06 57.4 66 47.0
TAR625G1196 Trochodendron aralioides HOM05D000231 ORTHO05D000132 1.0e-06 57.4 67 44.8
arahy.Tifrunner.gnm1.ann1.2NWJ1Y Arachis hypogaea HOM05D000231 ORTHO05D000132 1.8e-06 56.6 62 46.8
CDE07G0057 Ceratophyllum demersum HOM05D000231 ORTHO05D000132 1.8e-06 56.6 65 44.6
Dinv33151 Davidia involucrata HOM05D008942 ORTHO05D009202 1.8e-06 56.6 76 53.9
Glyma.04G045500 Glycine max HOM05D000231 ORTHO05D000132 1.8e-06 56.6 66 47.0
Gohir.D12G074700 Gossypium hirsutum HOM05D000231 ORTHO05D000132 1.8e-06 56.6 68 47.1
Gorai.008G082800 Gossypium raimondii HOM05D000231 ORTHO05D000132 1.8e-06 56.6 68 47.1
Aqoxy5G00878 Aquilegia oxysepala HOM05D000231 ORTHO05D000132 2.3e-06 56.2 67 41.8
arahy.Tifrunner.gnm1.ann1.43PIBJ Arachis hypogaea HOM05D000231 ORTHO05D000132 2.3e-06 56.2 62 46.8
PGSC0003DMG400021521 Solanum tuberosum HOM05D013140 ORTHO05D013551 2.3e-06 56.2 62 45.2
GSVIVG01000125001 Vitis vinifera HOM05D000231 ORTHO05D000132 2.3e-06 56.2 69 40.6
Ciclev10003170m.g Citrus clementina HOM05D000231 ORTHO05D000132 3.0e-06 55.8 68 48.5
Gohir.A05G209200 Gossypium hirsutum HOM05D000231 ORTHO05D000132 3.0e-06 55.8 81 42.0
Cfa013787 Carpinus fangiana HOM05D000231 ORTHO05D000132 4.0e-06 55.5 99 39.4
Cc10_g05720 Coffea canephora HOM05D000231 ORTHO05D000132 4.0e-06 55.5 57 52.6
Medtr3g103080 Medicago truncatula HOM05D000231 ORTHO05D000132 4.0e-06 55.5 66 45.5
arahy.Tifrunner.gnm1.ann1.EPPW6A Arachis hypogaea HOM05D000231 ORTHO05D000132 5.2e-06 55.1 66 45.5
arahy.Tifrunner.gnm1.ann1.J88HVL Arachis hypogaea HOM05D000231 ORTHO05D000132 5.2e-06 55.1 66 45.5
Dinv04058 Davidia involucrata HOM05D000231 ORTHO05D000132 5.2e-06 55.1 69 43.5
ECA238G4659 Erigeron canadensis HOM05D000231 ORTHO05D000132 5.2e-06 55.1 69 36.2
Gohir.D05G212900 Gossypium hirsutum HOM05D000231 ORTHO05D000132 5.2e-06 55.1 79 41.8
Atru.chr3.149 Acer truncatum HOM05D000231 ORTHO05D000132 6.8e-06 54.7 66 40.9
Atru.chr3.178 Acer truncatum HOM05D000231 ORTHO05D000132 6.8e-06 54.7 69 40.6
Manes.12G113400 Manihot esculenta HOM05D000231 ORTHO05D000132 6.8e-06 54.7 69 42.0
Oeu054191.1 Olea europaea HOM05D000231 ORTHO05D000132 6.8e-06 54.7 69 39.1
Sabra07G0047600 Salix brachista HOM05D000231 ORTHO05D000132 6.8e-06 54.7 67 43.3
VMungo1309G0586 Vigna mungo HOM05D000231 ORTHO05D000132 6.8e-06 54.7 66 43.9
Duzib147G0891 Durio zibethinus HOM05D000231 ORTHO05D000132 8.9e-06 54.3 67 41.8
Lj2g0003418 Lotus japonicus HOM05D000231 ORTHO05D000132 8.9e-06 54.3 66 42.4
QL06p039678 Quercus lobata HOM05D000231 ORTHO05D000132 8.9e-06 54.3 85 35.3
Sabra02G0093500 Salix brachista HOM05D000231 ORTHO05D000132 8.9e-06 54.3 79 32.9


User provided reference genes

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